Literature DB >> 35706778

A Multi-Scale Spatial and Temporal Attention Network on Dynamic Connectivity to Localize The Eloquent Cortex in Brain Tumor Patients.

Naresh Nandakumar1, Komal Manzoor2, Shruti Agarwal2, Jay J Pillai2, Sachin K Gujar2, Haris I Sair2, Archana Venkataraman1.   

Abstract

We present a deep neural network architecture that combines multi-scale spatial attention with temporal attention to simultaneously localize the language and motor areas of the eloquent cortex from dynamic functional connectivity data. Our multi-scale spatial attention operates on graph-based features extracted from the connectivity matrices, thus honing in on the inter-regional interactions that collectively define the eloquent cortex. At the same time, our temporal attention model selects the intervals during which these interactions are most pronounced. The final stage of our model employs multi-task learning to differentiate between the eloquent subsystems. Our training strategy enables us to handle missing eloquent class labels by freezing the weights in those branches while updating the rest of the network weights. We evaluate our method on resting-state fMRI data from one synthetic dataset and one in-house brain tumor dataset while using task fMRI activations as ground-truth labels for the eloquent cortex. Our model achieves higher localization accuracies than conventional deep learning approaches. It also produces interpretable spatial and temporal attention features which can provide further insights for presurgical planning. Thus, our model shows translational promise for improving the safety of brain tumor resections.

Entities:  

Keywords:  Brain Tumor rs-fMRI; CNN; Eloquent Cortex Localization

Year:  2021        PMID: 35706778      PMCID: PMC9195149          DOI: 10.1007/978-3-030-78191-0_19

Source DB:  PubMed          Journal:  Inf Process Med Imaging        ISSN: 1011-2499


  18 in total

1.  Interindividual variability in the hemispheric organization for speech.

Authors:  N Tzourio-Mazoyer; G Josse; F Crivello; B Mazoyer
Journal:  Neuroimage       Date:  2004-01       Impact factor: 6.556

2.  A component based noise correction method (CompCor) for BOLD and perfusion based fMRI.

Authors:  Yashar Behzadi; Khaled Restom; Joy Liau; Thomas T Liu
Journal:  Neuroimage       Date:  2007-05-03       Impact factor: 6.556

3.  Functional connectivity in the motor cortex of resting human brain using echo-planar MRI.

Authors:  B Biswal; F Z Yetkin; V M Haughton; J S Hyde
Journal:  Magn Reson Med       Date:  1995-10       Impact factor: 4.668

4.  Awake craniotomy versus surgery under general anesthesia for resection of intrinsic lesions of eloquent cortex--a prospective randomised study.

Authors:  Deepak Kumar Gupta; P S Chandra; B K Ojha; B S Sharma; A K Mahapatra; V S Mehta
Journal:  Clin Neurol Neurosurg       Date:  2007-02-14       Impact factor: 1.876

5.  BrainNetCNN: Convolutional neural networks for brain networks; towards predicting neurodevelopment.

Authors:  Jeremy Kawahara; Colin J Brown; Steven P Miller; Brian G Booth; Vann Chau; Ruth E Grunau; Jill G Zwicker; Ghassan Hamarneh
Journal:  Neuroimage       Date:  2016-09-28       Impact factor: 6.556

6.  Preoperative sensorimotor mapping in brain tumor patients using spontaneous fluctuations in neuronal activity imaged with functional magnetic resonance imaging: initial experience.

Authors:  Dongyang Zhang; James M Johnston; Michael D Fox; Eric C Leuthardt; Robert L Grubb; Michael R Chicoine; Matthew D Smyth; Abraham Z Snyder; Marcus E Raichle; Joshua S Shimony
Journal:  Neurosurgery       Date:  2009-12       Impact factor: 4.654

Review 7.  The WU-Minn Human Connectome Project: an overview.

Authors:  David C Van Essen; Stephen M Smith; Deanna M Barch; Timothy E J Behrens; Essa Yacoub; Kamil Ugurbil
Journal:  Neuroimage       Date:  2013-05-16       Impact factor: 6.556

8.  Local-Global Parcellation of the Human Cerebral Cortex from Intrinsic Functional Connectivity MRI.

Authors:  Alexander Schaefer; Ru Kong; Evan M Gordon; Timothy O Laumann; Xi-Nian Zuo; Avram J Holmes; Simon B Eickhoff; B T Thomas Yeo
Journal:  Cereb Cortex       Date:  2018-09-01       Impact factor: 5.357

9.  Integration of resting state functional MRI into clinical practice - A large single institution experience.

Authors:  Eric C Leuthardt; Gloria Guzman; S Kathleen Bandt; Carl Hacker; Ananth K Vellimana; David Limbrick; Mikhail Milchenko; Pamela Lamontagne; Benjamin Speidel; Jarod Roland; Michelle Miller-Thomas; Abraham Z Snyder; Daniel Marcus; Joshua Shimony; Tammie L S Benzinger
Journal:  PLoS One       Date:  2018-06-22       Impact factor: 3.240

10.  Functional connectivity networks for preoperative brain mapping in neurosurgery.

Authors:  Michael G Hart; Stephen J Price; John Suckling
Journal:  J Neurosurg       Date:  2016-08-26       Impact factor: 5.115

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