Literature DB >> 35706712

Model-free slice screening for ultrahigh-dimensional survival data.

Jing Zhang1, Yanyan Liu2.   

Abstract

For ultrahigh-dimensional data, independent feature screening has been demonstrated both theoretically and empirically to be an effective dimension reduction method with low computational demanding. Motivated by the Buckley-James method to accommodate censoring, we propose a fused Kolmogorov-Smirnov filter to screen out the irrelevant dependent variables for ultrahigh-dimensional survival data. The proposed model-free screening method can work with many types of covariates (e.g. continuous, discrete and categorical variables) and is shown to enjoy the sure independent screening property under mild regularity conditions without requiring any moment conditions on covariates. In particular, the proposed procedure can still be powerful when covariates are strongly dependent on each other. We further develop an iterative algorithm to enhance the performance of our method while dealing with the practical situations where some covariates may be marginally unrelated but jointly related to the response. We conduct extensive simulations to evaluate the finite-sample performance of the proposed method, showing that it has favourable exhibition over the existing typical methods. As an illustration, we apply the proposed method to the diffuse large-B-cell lymphoma study.
© 2020 Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Censoring; fused Kolmogorov–Smirnov filter; slice method; sure independent screening property; ultrahigh-dimensional survival data

Year:  2020        PMID: 35706712      PMCID: PMC9041676          DOI: 10.1080/02664763.2020.1772734

Source DB:  PubMed          Journal:  J Appl Stat        ISSN: 0266-4763            Impact factor:   1.416


  13 in total

1.  Nonparametric Independence Screening in Sparse Ultra-High Dimensional Additive Models.

Authors:  Jianqing Fan; Yang Feng; Rui Song
Journal:  J Am Stat Assoc       Date:  2011-06       Impact factor: 5.033

2.  Censored Rank Independence Screening for High-dimensional Survival Data.

Authors:  Rui Song; Wenbin Lu; Shuangge Ma; X Jessie Jeng
Journal:  Biometrika       Date:  2014       Impact factor: 2.445

3.  Discussion of "Sure Independence Screening for Ultra-High Dimensional Feature Space.

Authors:  Hao Helen Zhang
Journal:  J R Stat Soc Series B Stat Methodol       Date:  2008-11       Impact factor: 4.488

4.  Censored cumulative residual independent screening for ultrahigh-dimensional survival data.

Authors:  Jing Zhang; Guosheng Yin; Yanyan Liu; Yuanshan Wu
Journal:  Lifetime Data Anal       Date:  2017-05-26       Impact factor: 1.588

5.  MARGINAL EMPIRICAL LIKELIHOOD AND SURE INDEPENDENCE FEATURE SCREENING.

Authors:  Jinyuan Chang; Cheng Yong Tang; Yichao Wu
Journal:  Ann Stat       Date:  2013-08-01       Impact factor: 4.028

6.  Ultrahigh dimensional feature selection: beyond the linear model.

Authors:  Jianqing Fan; Richard Samworth; Yichao Wu
Journal:  J Mach Learn Res       Date:  2009       Impact factor: 3.654

7.  Model-Free Feature Screening for Ultrahigh Dimensional Data.

Authors:  Liping Zhu; Lexin Li; Runze Li; Lixing Zhu
Journal:  J Am Stat Assoc       Date:  2012-01-24       Impact factor: 5.033

8.  Univariate shrinkage in the cox model for high dimensional data.

Authors:  Robert J Tibshirani
Journal:  Stat Appl Genet Mol Biol       Date:  2009-04-14

9.  The use of molecular profiling to predict survival after chemotherapy for diffuse large-B-cell lymphoma.

Authors:  Andreas Rosenwald; George Wright; Wing C Chan; Joseph M Connors; Elias Campo; Richard I Fisher; Randy D Gascoyne; H Konrad Muller-Hermelink; Erlend B Smeland; Jena M Giltnane; Elaine M Hurt; Hong Zhao; Lauren Averett; Liming Yang; Wyndham H Wilson; Elaine S Jaffe; Richard Simon; Richard D Klausner; John Powell; Patricia L Duffey; Dan L Longo; Timothy C Greiner; Dennis D Weisenburger; Warren G Sanger; Bhavana J Dave; James C Lynch; Julie Vose; James O Armitage; Emilio Montserrat; Armando López-Guillermo; Thomas M Grogan; Thomas P Miller; Michel LeBlanc; German Ott; Stein Kvaloy; Jan Delabie; Harald Holte; Peter Krajci; Trond Stokke; Louis M Staudt
Journal:  N Engl J Med       Date:  2002-06-20       Impact factor: 91.245

10.  Nonparametric Independence Screening in Sparse Ultra-High Dimensional Varying Coefficient Models.

Authors:  Jianqing Fan; Yunbei Ma; Wei Dai
Journal:  J Am Stat Assoc       Date:  2014       Impact factor: 5.033

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