Literature DB >> 35704073

CRISPR-CasB technology in forensic DNA analysis: challenges and solutions.

Hirak Ranjan Dash1, Mansi Arora2.   

Abstract

CRISPR-Cas technology has revolutionized the field of biotechnology with its precise therapeutic use from genetic as well as infectious diseases point of view. This technology is rapidly evolving to single tool enabling site-directed cut in the genome and highly specific activation or inhibition of gene expression or the exchange of single bases. Besides clinical applications, CRISPR-Cas technology has also shown promising use in the field of forensic DNA analysis. Enrichment of targeted genetic marker for identification followed by sequencing and non-PCR-dependent technique ensures the use of CRISPR-Cas technology in challenging forensic biological samples. The use of this advanced technology is also deemed helpful in mixed profile attribution, mostly in LCN contributors and the generation of a useful DNA profile in degraded samples. Besides its useful applications in forensic DNA analysis, CRISPR-Cas technology poses a huge threat from the generation of ghost DNA profiles by modification/alteration of target genetic markers. Forensic DNA analysts should carry out analysis of additional markers such as non-CODIS markers, Y-, X-chromosome markers, and mitochondrial DNA sequencing in a suspected ghost DNA profile case. KEY POINTS: • CRISPR-Cas9 technique is useful in analyzing LCN, mixed and degraded samples • Alteration of DNA using this technique can lead to generation of ghost DNA profiles • Alternative genetic markers and methylation pattern may detect a ghost DNA profile.
© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  CRISPR-Cas; Forensic DNA; Ghost DNA; Mixed profile; STR-Seq

Mesh:

Substances:

Year:  2022        PMID: 35704073     DOI: 10.1007/s00253-022-12016-8

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  32 in total

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3.  Evaluation of diallelic STR markers with inter-population allelic database for their usefulness in paternity trios in the Central Indian population.

Authors:  Hirak Ranjan Dash; Kamayani Vajpayee; Radhika Agarwal; Anubha Gang; Ritesh Shukla; Ankit Srivastava
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Review 4.  Non-homologous DNA end joining and alternative pathways to double-strand break repair.

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Journal:  Nat Rev Mol Cell Biol       Date:  2017-05-17       Impact factor: 94.444

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6.  In vivo administration of lentiviral vectors triggers a type I interferon response that restricts hepatocyte gene transfer and promotes vector clearance.

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Review 7.  A field guide to whole-genome sequencing, assembly and annotation.

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8.  Bioethical issues in genome editing by CRISPR-Cas9 technology.

Authors:  Fatma Betül Ayanoğlu; Ayşe Eser Elçin; Yaşar Murat Elçin
Journal:  Turk J Biol       Date:  2020-04-02

9.  Sequence variations, flanking region mutations, and allele frequency at 31 autosomal STRs in the central Indian population by next generation sequencing (NGS).

Authors:  Hirak Ranjan Dash; Kamlesh Kaitholia; R K Kumawat; Anil Kumar Singh; Pankaj Shrivastava; Gyaneshwer Chaubey; Surajit Das
Journal:  Sci Rep       Date:  2021-12-01       Impact factor: 4.379

Review 10.  CRISPR-Cas immunity, DNA repair and genome stability.

Authors:  Andrew Cubbon; Ivana Ivancic-Bace; Edward L Bolt
Journal:  Biosci Rep       Date:  2018-09-20       Impact factor: 3.840

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