Literature DB >> 35702583

Comprehensive bioinformatics analysis of susceptibility genes for developmental dysplasia of the hip.

Wei Yang1,2, Guiyang Jin3, Keying Qian2, Chao Zhang1,2, Wei Zhi1,2, Dan Yang1,2, Yanqin Lu1,2, Jinxiang Han1,2.   

Abstract

Developmental dysplasia of the hip (DDH) is a multifactorial disease, which occurs under environmental and genetic influence. The etiopathogenesis of DDH has not been fully explained. As research progresses, many candidate genes have been found to be closely related to the occurrence of DDH. In this study, we comprehensively examined 16 susceptibility genes of DDH using bioinformatics. COL1A1 encodes the pro-alpha1 chains of type I collagen, which is the major protein component of the bone extracellular matrix (ECM). The genes displaying the most statistically significant co-expression link to COL1A1 are ASPN, TGFB1, DKK1, IL-6, TENM3 and GDF5. DKK1, FRZB and WISP3 are components of the Wnt signaling pathway. CX3CR1 and GDF5 regulate chondrogenesis through the canonical Wnt signaling pathway. ASPN could induce collagen mineralization through binding with collagen and calcium. Integrated bioinformatics analysis indicates that ECM, Wnt signaling pathway and TGF-β signaling pathway are involved in the occurrence of DDH. These provide a basis for further exploring the pathogenesis of DDH. 2022, International Research and Cooperation Association for Bio & Socio - Sciences Advancement.

Entities:  

Keywords:  Wnt signaling pathway; bioinformatics; developmental dysplasia of the hip; protein-protein interaction; susceptibility gene

Year:  2022        PMID: 35702583      PMCID: PMC9161127          DOI: 10.5582/irdr.2022.01043

Source DB:  PubMed          Journal:  Intractable Rare Dis Res        ISSN: 2186-3644


  50 in total

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2.  Effects of triple prevention of CDH, stimulated by distribution of "baby packages".

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3.  Association of a single nucleotide polymorphism in HOXB9 with developmental dysplasia of the hip: a case-control study.

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4.  Association of a single nucleotide polymorphism in pregnancy-associated plasma protein-A2 with developmental dysplasia of the hip: a case-control study.

Authors:  Jingyu Jia; Lianyong Li; Qun Zhao; Lijun Zhang; Jiling Ru; Xijuan Liu; Qiwi Li; Liwei Shi
Journal:  Osteoarthritis Cartilage       Date:  2011-10-13       Impact factor: 6.576

5.  Association of interleukin-6 and transforming growth factor-β1 gene polymorphisms with developmental hip dysplasia and severe adult hip osteoarthritis: a preliminary study.

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Journal:  Dev Dyn       Date:  2017-01-27       Impact factor: 3.780

7.  Developmental Dysplasia of the Hip in Adolescents and Young Adults.

Authors:  Matthew R Schmitz; Andrew S Murtha; John C Clohisy
Journal:  J Am Acad Orthop Surg       Date:  2020-02-01       Impact factor: 3.020

8.  The cBio cancer genomics portal: an open platform for exploring multidimensional cancer genomics data.

Authors:  Ethan Cerami; Jianjiong Gao; Ugur Dogrusoz; Benjamin E Gross; Selcuk Onur Sumer; Bülent Arman Aksoy; Anders Jacobsen; Caitlin J Byrne; Michael L Heuer; Erik Larsson; Yevgeniy Antipin; Boris Reva; Arthur P Goldberg; Chris Sander; Nikolaus Schultz
Journal:  Cancer Discov       Date:  2012-05       Impact factor: 39.397

9.  The role of the Wnt-signaling antagonist DKK1 in the development of osteolytic lesions in multiple myeloma.

Authors:  Erming Tian; Fenghuang Zhan; Ronald Walker; Erik Rasmussen; Yupo Ma; Bart Barlogie; John D Shaughnessy
Journal:  N Engl J Med       Date:  2003-12-25       Impact factor: 91.245

10.  Asporin-deficient mice have tougher skin and altered skin glycosaminoglycan content and structure.

Authors:  Marco Maccarana; René B Svensson; Anki Knutsson; Antonis Giannopoulos; Mea Pelkonen; MaryAnn Weis; David Eyre; Matthew Warman; Sebastian Kalamajski
Journal:  PLoS One       Date:  2017-08-31       Impact factor: 3.240

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