Literature DB >> 35690454

Comparative genomics analysis of genus Leuconostoc resolves its taxonomy and elucidates its biotechnological importance.

Sanjeet Kumar1, Kanika Bansal2, Santosh Kumar Sethi3.   

Abstract

Genus Leuconostoc consists of a diverse range of lactic acid bacteria (LAB) from dairy, food and environmental ecology. Even though the species of Leuconostoc are commercially significant, their taxonomy is largely based on old, low-resolution classical methods. Several taxonomic reclassifications in the past were inadequate for microbiologist and food industry professionals to demarcate any new strain of genus Leuconostoc. The current taxonomy of the genus is largely based on classical approaches, which are in utmost need of reinvestigation by whole genome-based approaches. In the present study, the taxono-phylogenomic analysis depicted sixteen species, including three novel genomospecies and several reshufflings across the species, namely, L. mesenteroides, L. pseudomesenteroides, L. gelidum and L. lactis. Genus-wide T3PKS, CAZymes, and vector plasmids supports its biotechnological potential. However, detection of the antibiotic resistance genes in such an important LAB genus raises concern over their utility in industry. Present, large-scale in-depth genome-based study can shed light on the genome dynamics of the member species, help to obtain a more robust taxonomy and elucidate its biotechnology importance.
Copyright © 2022. Published by Elsevier Ltd.

Entities:  

Keywords:  CAZymes; Genomospecies; Leuconostoc; Phylogenomics; Reclassification; Taxonogenomic; Type III PKS

Mesh:

Year:  2022        PMID: 35690454     DOI: 10.1016/j.fm.2022.104039

Source DB:  PubMed          Journal:  Food Microbiol        ISSN: 0740-0020            Impact factor:   5.516


  3 in total

1.  Phylogenomic analysis of the genus Leuconostoc.

Authors:  Stefano Raimondi; Francesco Candeliere; Alberto Amaretti; Stefania Costa; Silvia Vertuani; Gloria Spampinato; Maddalena Rossi
Journal:  Front Microbiol       Date:  2022-07-25       Impact factor: 6.064

2.  Comparative genome analysis of four Leuconostoc strains with a focus on carbohydrate-active enzymes and oligosaccharide utilization pathways.

Authors:  Anshul Sharma; Neha Sharma; Deepshikha Gupta; Hae-Jeung Lee; Young-Seo Park
Journal:  Comput Struct Biotechnol J       Date:  2022-08-27       Impact factor: 6.155

3.  Identification of Leuconostoc species based on novel marker genes identified using real-time PCR via computational pangenome analysis.

Authors:  Eiseul Kim; Seung-Min Yang; Ik-Seon Kim; So-Yun Lee; Hae-Yeong Kim
Journal:  Front Microbiol       Date:  2022-09-23       Impact factor: 6.064

  3 in total

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