Literature DB >> 35690043

Reading oscillatory instructions: How cells achieve time-dependent responses to oscillating transcription factors.

Veena Venkatachalam1, Ashwini Jambhekar2, Galit Lahav3.   

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Year:  2022        PMID: 35690043      PMCID: PMC9533215          DOI: 10.1016/j.ceb.2022.102099

Source DB:  PubMed          Journal:  Curr Opin Cell Biol        ISSN: 0955-0674            Impact factor:   8.386


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  31 in total

1.  Dynamics of the p53-Mdm2 feedback loop in individual cells.

Authors:  Galit Lahav; Nitzan Rosenfeld; Alex Sigal; Naama Geva-Zatorsky; Arnold J Levine; Michael B Elowitz; Uri Alon
Journal:  Nat Genet       Date:  2004-01-18       Impact factor: 38.330

2.  Chromatin-state barriers enforce an irreversible mammalian cell fate decision.

Authors:  M Andrés Blanco; David B Sykes; Lei Gu; Mengjun Wu; Ricardo Petroni; Rahul Karnik; Mathias Wawer; Joshua Rico; Haitao Li; William D Jacobus; Ashwini Jambhekar; Sihem Cheloufi; Alexander Meissner; Konrad Hochedlinger; David T Scadden; Yang Shi
Journal:  Cell Rep       Date:  2021-11-09       Impact factor: 9.423

3.  p53 Pulses Diversify Target Gene Expression Dynamics in an mRNA Half-Life-Dependent Manner and Delineate Co-regulated Target Gene Subnetworks.

Authors:  Joshua R Porter; Brian E Fisher; Eric Batchelor
Journal:  Cell Syst       Date:  2016-04-07       Impact factor: 10.304

Review 4.  Dynamic regulation of transcriptional states by chromatin and transcription factors.

Authors:  Ty C Voss; Gordon L Hager
Journal:  Nat Rev Genet       Date:  2013-12-17       Impact factor: 53.242

5.  Dynamic reprogramming of chromatin: paradigmatic palimpsests and HES factors.

Authors:  Kurtulus Kok; David N Arnosti
Journal:  Front Genet       Date:  2015-02-10       Impact factor: 4.599

6.  Protein stability of p53 targets determines their temporal expression dynamics in response to p53 pulsing.

Authors:  Ryan L Hanson; Joshua R Porter; Eric Batchelor
Journal:  J Cell Biol       Date:  2019-02-11       Impact factor: 10.539

7.  p53 pulse modulation differentially regulates target gene promoters to regulate cell fate decisions.

Authors:  Marie D Harton; Woo Seuk Koh; Amie D Bunker; Abhyudai Singh; Eric Batchelor
Journal:  Mol Syst Biol       Date:  2019-09       Impact factor: 13.068

8.  Nuclear myosin 1 activates p21 gene transcription in response to DNA damage through a chromatin-based mechanism.

Authors:  Tomas Venit; Khairunnisa Semesta; Sannia Farrukh; Martin Endara-Coll; Robert Havalda; Pavel Hozak; Piergiorgio Percipalle
Journal:  Commun Biol       Date:  2020-03-11

9.  NF-κB dynamics determine the stimulus specificity of epigenomic reprogramming in macrophages.

Authors:  Quen J Cheng; Sho Ohta; Katherine M Sheu; Roberto Spreafico; Adewunmi Adelaja; Brooks Taylor; Alexander Hoffmann
Journal:  Science       Date:  2021-06-18       Impact factor: 47.728

10.  Long-term association of a transcription factor with its chromatin binding site can stabilize gene expression and cell fate commitment.

Authors:  J B Gurdon; Khayam Javed; Munender Vodnala; Nigel Garrett
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-12       Impact factor: 11.205

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