Literature DB >> 35686436

Early detection of SARS-CoV-2 variants using traveler-based genomic surveillance at four US airports, September 2021- January 2022.

Renee D Wegrzyn1, Grace D Appiah2, Robert Morfino1, Scott R Milford3, Allison Taylor Walker2, Ezra T Ernst3, William W Darrow3, Siyao Lisa Li1, Keith Robison1, Duncan MacCannell4, Dongjuan Dai1, Brintha P Girinathan1, Allison L Hicks1, Bryan Cosca1, Gabrielle Woronoff1, Alex M Plocik1, Birgitte B Simen1, Leah Moriarty2, Sarah Anne J Guagliardo2, Martin S Cetron2, Cindy R Friedman2.   

Abstract

We enrolled arriving international air travelers in SARS-CoV-2 genomic surveillance, using molecular testing of pooled nasal swabs, and sequencing positive samples for viral sublineage. Traveler-based genomic surveillance provided early warning variant detection; we reported the first U.S. Omicron BA.2 and first BA.3 in North America, weeks before next reported detection.
© The Author(s) 2022. Published by Oxford University Press on behalf of Infectious Diseases Society of America.

Entities:  

Keywords:  SARS-CoV-2; genomic surveillance; international travelers

Year:  2022        PMID: 35686436      PMCID: PMC9214179          DOI: 10.1093/cid/ciac461

Source DB:  PubMed          Journal:  Clin Infect Dis        ISSN: 1058-4838            Impact factor:   20.999


  1 in total

1.  Comparison of SARS-CoV-2 spike RNA sequences in feces and nasopharynx indicates intestinal replication.

Authors:  Thomas Beck-Friis; Ambjörn Kärmander; Kristina Nyström; Hao Wang; Magnus Gisslén; Lars-Magnus Andersson; Heléne Norder
Journal:  Gut Pathog       Date:  2022-08-20       Impact factor: 5.324

  1 in total

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