| Literature DB >> 35683636 |
Eujin Park1,2, Chung Lee3,4, Nayoung K D Kim3,4, Yo Han Ahn1, Young Seo Park5, Joo Hoon Lee5, Seong Heon Kim6, Min Hyun Cho7, Heeyeon Cho8, Kee Hwan Yoo9, Jae Il Shin10,11, Hee Gyung Kang1, Il-Soo Ha1, Woong-Yang Park3,4,12, Hae Il Cheong1.
Abstract
In the original article [...].Entities:
Year: 2022 PMID: 35683636 PMCID: PMC9181158 DOI: 10.3390/jcm11113016
Source DB: PubMed Journal: J Clin Med ISSN: 2077-0383 Impact factor: 4.964
Mutation screening results.
| Gene | Mode of Inheritance | No. of Patients | % of Total Patients ( |
|---|---|---|---|
| SRNS/FSGS gene | |||
|
| AD | 30 (23.6%) | 10.3% |
|
| AR | 11 (8.7%) | 3.8% |
|
| AR | 11 (8.7%) | 3.8% |
|
| AR | 9 (7.1%) | 3.1% |
|
| AR | 8 (6.3%) | 2.7% |
|
| AD | 6 (4.7%) | 2.1% |
|
| AD | 6 (4.7%) | 2.1% |
|
| AD | 5 (3.9%) | 1.7% |
|
| AR | 4 (3.1%) | 1.4% |
|
| AD | 4 (3.1%) | 1.4% |
|
| AR | 3 (2.4%) | 1.0% |
|
| AR | 3 (2.4%) | 1.0% |
|
| Mitochondrial | 3 (2.4%) | 1.0% |
|
| AD | 1 (0.8%) | 0.3% |
|
| AD | 1 (0.8%) | 0.3% |
|
| AD | 1 (0.8%) | 0.3% |
|
| AD | 1 (0.8%) | 0.3% |
|
| AR | 1 (0.8%) | 0.3% |
|
| AR | 1 (0.8%) | 0.3% |
|
| AR | 1 (0.8%) | 0.3% |
|
| X-linked | 1 (0.8%) | 0.3% |
|
| AR | 1 (0.8%) | 0.3% |
| Subtotal | 113 (89.0%) | 38.8% | |
| Phenocopying gene | |||
|
| X-linked | 6 (4.7%) | 2.1% |
|
| AD/AR | 4 (3.1%) | 1.4% |
|
| AR | 3 (2.4%) | 1.0% |
|
| AD | 1 (0.8%) | 0.3% |
| Subtotal | 14 (11.0%) | 4.8% | |
| Total | 127 (100%) | 43.6% | |
AD, autosomal dominant; AR, autosomal recessive.
Genetic studies in large cohorts of pediatric patients with steroid-resistant nephrotic syndrome.
| Trautmann et al., 2015 [3] | Sadowski et al., 2015 [4] | Bierzynska et al., 2017 [2] | Wang et al., 2017 [5] | Warejko et al., 2018 [23] | Nagano et al., 2020 [6] | This Study | |
|---|---|---|---|---|---|---|---|
| Country | International | International | United Kingdom | China | International | Japan | Korea |
| Modality | GP (31 genes) | GP (27 genes) | WES (53 genes) | GP (28 genes) | WES | GP (60 genes) | Sanger/GP (57 genes) c |
| Detection rate a | 277/1174 (23.6%) | 526/1783 (29.5%) | 49/187 (26.2%) | 34/120 (28.3%) | 85/300 (28.3%) | 69/230 (30.0%) | 127/291 (43.6%) |
| Commonly | |||||||
a Overall detection rate of mutations; b The parentheses denote the percentage of total patients with mutations. c WES (n = 4) and polymerase chain reaction-restriction fragment length polymorphism (n = 3) as well; GP, gene panel; WES, whole-exome sequencing.
Genotypes and phenotypes of patients with disease-causing mutations.
| Gene | Patient ID | Mutations | Age at Onset (Years) | Sex b | Family History | Mode of Onset | Kidney Biopsy | Renal Outcome | Time to ESRD (Years) |
|---|---|---|---|---|---|---|---|---|---|
| SRNS-20 | c.1400G > A, p.R467Q | At birth | M | N | NS | ND | ESRD | 0.1 | |
| SRNS-42 | c.1136delT, p.V379Dfs a | 6.5 | M | N | PU | FSGS | ESRD | 2.7 | |
| SRNS-126 | c.1231C > T, p.H411Y a | 1.5 | F | N | NS | FSGS | ESRD | 7.3 | |
| SRNS-151 | c.1315C > T, p.R439C | At birth | M | N | NS | ND | ESRD | 0.0 | |
| SRNS-156 | c.760C > A, p.P254T a | 3.3 | M | N | NS | FSGS | ESRD | 6.1 | |
| SRNS-186 | c.1363C > T, p.P455S | 8.0 | M | Y | NS | FSGS | Normal eGFR | NA | |
| SRNS-222 | c.1316G > A, p.R439H | At birth | M | N | NS | FSGS | ESRD | 0.4 | |
| SRNS-223 | c.1316G > A, p.R439H | At birth | F | N | NS | DMS | ESRD | 0.0 | |
| SRNS-224 | c.1316G > A, p.R439H | At birth | F | N | NS | FSGS | Death | NA | |
| SRNS-225 | c.1316G > A, p.R439H | At birth | F | N | NS | ND | ESRD | 0.0 | |
| SRNS-226 | c.1316G > C, p.R439P | At birth | M | NA | PU | ND | ESRD | 1.8 | |
| SRNS-227 | c.1315C > T, p.R439C | At birth | F | N | NS | ND | ESRD | 0.0 | |
| SRNS-228 | c.1324C > A, p.Q442K | 1.0 | F | N | ESRD | ND | ESRD | 0.0 | |
| SRNS-229 | c.1372T > A, p.C458S | At birth | M | N | NS | DMS | ESRD | 1.1 | |
| SRNS-230 | c.1399C > T, p.R467W | At birth | M | N | PU | DMS | ESRD | 1.8 | |
| SRNS-231 | c.1405G > T, p.D469Y | At birth | F | NA | NS | DMS | ESRD | 0.0 | |
| SRNS-232 | c.785 − 1G > C in intron 2 a | NA | M | NA | NA | ND | NA | NA | |
| SRNS-233 | c.1447 + 4C > T in intron 9 | 6.6 | F | N | NS | FSGS | CKD | NA | |
| SRNS-234 | c.1447 + 4C > T in intron 9 | 2.6 | F | N | NS | FSGS | Normal eGFR | NA | |
| SRNS-235 | c.1447 + 4C > T in intron 9 | 3.5 | M | N | ESRD | ND | ESRD | 0.0 | |
| SRNS-236 | c.1447 + 4C > T in intron 9 | 6.8 | M | N | NS | MesPGN | ESRD | 15.4 | |
| SRNS-237 | c.1447 + 4C > T in intron 9 | At birth | F | N | CKD | ND | ESRD | 0.7 | |
| SRNS-238 | c.1447 + 5G > A in intron 9 | At birth | M | N | PU | FSGS | ESRD | 19.7 | |
| SRNS-239 | c.1447 + 5G > A in intron 9 | 5.0 | F | N | NS | FSGS | ESRD | 4.2 | |
| SRNS-240 | c.1447 + 5G > A in intron 9 | 6.8 | F | N | PU | FSGS | ESRD | 12.9 | |
| SRNS-241 | c.1447 + 5G > A in intron 9 | 11.4 | M | N | CKD | FSGS | ESRD | 0.3 | |
| SRNS-242 | c.1447 + 5G > A in intron 9 | 12.3 | M | N | PU | FSGS | Normal eGFR | NA | |
| SRNS-243 | c.1419_1430del12, p.H474_T477del a | At birth | M | N | ESRD | ND | ESRD | 0.0 | |
| SRNS-244 | c.1381T > C, p.C461R | 2.2 | F | N | ESRD | MesPGN | ESRD | 0.0 | |
| SRNS-245 | c.1297T > C, p.C433R | At birth | F | N | ESRD | ND | ESRD | 0.0 | |
| SRNS-61 | c.686A > C, p.Q229P | 1.1 | M | N | PU | FSGS | Normal eGFR | NA | |
| SRNS-103 | c.124G > T, p.G42C a
| At birth | F | N | NS | FSGS | ESRD | 0.4 | |
| SRNS-203 | c.484C > T, p.R162* | 9.1 | M | N | PU | FSGS | ESRD | 0.8 | |
| SRNS-251 | c.189_191del3, p.K64del | 3.9 | M | N | NS | FSGS | ESRD | 2.2 | |
| SRNS-252 | c.189_191del3, p.K64del | 2.0 | F | N | NS | FSGS | ESRD | 1.1 | |
| SRNS-253 | c.189_191del3, p.K64del | 3.9 | F | N | NS | FSGS | ESRD | 0.1 | |
| SRNS-254 | c.189_191del3, p.K64del | 2.7 | F | N | NS | FSGS | ESRD | 1.9 | |
| SRNS-255 | c.189_191del3, p.K64del | 1.2 | F | Y | NS | FSGS | ESRD | 0.1 | |
| SRNS-256 | c.189_191del3, p.K64del | 3.1 | M | N | NS | FSGS | ESRD | 0.4 | |
| SRNS-257 | c.686A > C, p.Q229P | At birth | M | N | NS | FSGS | ESRD | 1.7 | |
| SRNS-258 | c.189_191del3, p.K64del | 1.1 | M | N | NS | FSGS | ESRD | 0.2 | |
| SRNS-85 | c.2156_2163del8, p.L719Pfs*4 | At birth | F | Y | NS | MesPGN | Death | 0.0 | |
| SRNS-206 | c.2156_2163del8, p.L719Pfs*4 | At birth | M | N | NS | MesPGN | ESRD | 2.5 | |
| SRNS-207 | c.2442C > G, p.Y814* | At birth | F | N | NS | ND | ESRD | 3.0 | |
| SRNS-208 | c.188A > G, p.Q63R | At birth | M | N | NS | FSGS | ESRD | 1.6 | |
| SRNS-209 | c.3027C > G, p.Y1009* | At birth | F | N | NS | ND | ESRD | 3.2 | |
| SRNS-210 | c.2765C > A, p.A922D | At birth | M | N | NS | FSGS | CKD | NA | |
| SRNS-211 | c.2156_2163del8, p.L719Pfs*4 | At birth | M | N | NS | ND | ESRD | 4.7 | |
| SRNS-212 | c.58 + 2T > C in intron 1 a
| At birth | F | Y | NS | MesPGN | ESRD | 1.5 | |
| SRNS-213 | c.526 + 1G > A in intron 4 | At birth | M | N | NS | ND | Normal eGFR | NA | |
| SRNS-214 | c.3213dupG, p.L1072Afs*24 a
| At birth | M | N | NS | ND | Death | 0.0 | |
| SRNS-215 | c.139delG, p.A47Pfs*81 (homozygote) | At birth | M | N | NS | MesPGN | ESRD | 1.8 | |
| SRNS-71 | c.934delT, p.Y312Tfs a
| 4.8 | M | N | PU | FSGS | ESRD | 8.7 | |
| SRNS-259 | c.2071C > T, p.Q691* | 4.3 | M | Y | NS | FSGS | ESRD | 4.2 | |
| SRNS-260 | c.627_663dup37, p.L225Ffs*15 a
| 3.8 | F | N | PU | FSGS | ESRD | 3.0 | |
| SRNS-261 | c.1079_1083del5, p.E360Gfs*6 | 3.4 | M | Y | NS | FSGS | ESRD | 2.0 | |
| SRNS-262 | c.1079_1083de5l, p.E360Gfs*6 | 2.4 | M | N | PU | FSGS | ESRD | 2.7 | |
| SRNS-263 | c.1079_1083del5, p.E360Gfs*6 | 3.8 | M | N | ESRD | ND | ESRD | 0.0 | |
| SRNS-264 | c.469G > T, p.D157Y | 10.9 | F | Y | CKD | FSGS | ESRD | 2.1 | |
| SRNS-265 | c.1079_1083del5, p.E360Gfs*6 | 4.0 | F | N | ESRD | ND | ESRD | 0.0 | |
| SRNS-266 | c.2492A > C, p.D831A | 4.1 | M | Y | PU | FSGS | ESRD | 7.4 | |
| SRNS-25 | c.759C > A, p.N253K (homozygote) | 1.1 | F | NA | NS | FSGS | ESRD | 1.5 | |
| SRNS-35 | c.737G > A, p.S246N | 6.7 | M | N | PU | FSGS | CKD | NA | |
| SRNS-93 | c.737G > A, p.S246N | 9.9 | F | N | PU | FSGS | Normal eGFR | NA | |
| SRNS-246 | c.449G > A, p.R150Q | 5.1 | M | Y | PU | FSGS | ESRD | 5.1 | |
| SRNS-247 | c.737G > A, p.S246N | 10.8 | F | N | PU | FSGS | ESRD | 2.0 | |
| SRNS-248 | c.737G > A, p.S246N (homozygote) | 9.2 | F | N | PU | FSGS | ESRD | 3.0 | |
| SRNS-249 | c.737G > A, p.S246N | 6.9 | F | N | PU | FSGS | ESRD | 3.9 | |
| SRNS-250 | c.737G > A, p.S246N (homozygote) | 13.0 | F | N | PU | FSGS | Normal eGFR | NA | |
| SRNS-205 | c.3494G > T, p.R1165L | 16.8 | F | Y | PU | ND | ESRD | 17.5 | |
| SRNS-273 | c. 2152C > T, p.R718W | 1.3 | M | N | NS | MesPGN | ESRD | 5.3 | |
| SRNS-274 | c.287C > T, p.S96L | 20.0 | M | N | PU | FSGS | ESRD | 0.7 | |
| SRNS-275 | c.287C > T, p.S96L | 12.1 | F | N | PU | ND | ESRD | 8.3 | |
| SRNS-276 | c.2104C > T, p.R702C | 8.7 | F | NA | PU | MesPGN | ESRD | 7.8 | |
| SRNS-277 | c.287C > T, p.S96L | 12.4 | M | NA | PU | MesPGN | ESRD | 10.5 | |
| SRNS-63 | c.233T > G, p.L78R a | 11.0 | M | N | PU | FSGS | ESRD | 6.7 | |
| SRNS-69 | c.658G > A, p.E220K | 11.1 | F | N | PU | FSGS | ESRD | 4.0 | |
| SRNS-268 | c.658G > A, p.E220K | 7.4 | M | Y | PU | FSGS | ESRD | 5.8 | |
| SRNS-269 | c.658G > A, p.E220K | 11.7 | M | N | NS | FSGS | ESRD | 5.5 | |
| SRNS-270 | c.230T > C, p.L77P | 9.2 | F | N | NS | FSGS | ESRD | 3.4 | |
| SRNS-271 | c.529C > T, p.R177C | 12.6 | F | Y | PU | FSGS | Normal eGFR | NA | |
| SRNS-26 | c.76dupG, p.V26Gfs*28 | 5.3 | M | N | PU | FSGS | ESRD | 10.2 | |
| SRNS-31 | c.563A > G, p.N188S a | 3.4 | M | N | NS | ND | Normal eGFR | NA | |
| SRNS-32 | c.222_225dup4, p.G76Dfs a | 13.4 | M | Y | PU | FSGS | CKD | NA | |
| SRNS-95 | c.74G > A, p.G25E a | 7.2 | F | N | PU | FSGS | ESRD | 7.3 | |
| SRNS-191 | c.419G > A, p.R140Q | 7.8 | M | N | PU | FSGS | Normal eGFR | NA | |
| SRNS-27 | c.503G > A, p.R168H | 1.3 | F | NA | NS | ND | ESRD | 3.6 | |
| SRNS-47 | c.412C > T, p.R138* | 2.1 | M | N | NS | FSGS | ESRD | 4.9 | |
| SRNS-136 | c.502C > T, p.R168C | 6.9 | M | N | PU | FSGS | CKD | NA | |
| SRNS-216 | c.358T > C, p.S120P | At birth | M | N | NS | FSGS | ESRD | 8.4 | |
| SRNS-49 | c.834 + 1G > A in intron 14 | 10.0 | F | Y | PU | FSGS | CKD | NA | |
| SRNS-81 | c.956G > A, p.G319D | 10.1 | M | Y | PU | FSGS | ESRD | 10.1 | |
| SRNS-87 | c.4946delT, p.L1649Rfs*4 a | 12.9 | M | Y | PU | FSGS | ESRD | 6.7 | |
| SRNS-120 | c.1165 + 1G > A in intron 19 | 3.8 | M | N | NS | FSGS | ESRD | 6.7 | |
| SRNS-134 | c.4082T > A, p.L1361* a | 14.0 | M | Y | PU | FSGS | ESRD | 8.4 | |
| SRNs-190 | c.4532G > A, p.R1511H | 12.8 | M | N | PU | FSGS | CKD | NA | |
| SRNS-53 | c.1111delG, p.D371Tfs a
| 0.8 | F | Y | PU | MesPGN | ESRD | 18.9 | |
| SRNS-148 | c.2630G > A, p.R877Q | 3.6 | M | N | NS | ND | Death | 2.3 | |
| SRNS-152 | c.1046G > A, p.R349Q a | 2.5 | F | N | NS | FSGS | Normal eGFR | NA | |
| SRNS-181 | c.2630G > A, p.R877Q | 14.3 | F | N | PU | FSGS | Normal eGFR | NA | |
| SRNS-204 | c.194G > T, p.S65I | 9.8 | M | Y | PU | ND | Normal eGFR | NA | |
| SRNS-280 | c.183C > A, p.S61R | 12.5 | F | N | PU | FSGS | CKD | NA | |
| SRNS-281 | c.211C > G, p.P71A | 4.4 | M | N | PU | FSGS | ESRD | 0.6 | |
| SRNS-282 | c.212C > T, p.P71L | 1.2 | M | N | PU | ND | Normal eGFR | NA | |
| SRNS-217 | c.1503_1504delAT, p.C502* | 0.7 | F | N | NS | FSGS | ESRD | 10.8 | |
| SRNS-218 | c.2283-2286del4, p.S762Rfs*29 | At birth | F | N | NS | FSGS | CKD | NA | |
| SRNS-219 | c.474delT, p.A159Pfs*33 a
| At birth | F | N | NS | ND | ESRD | 0.1 | |
| SRNS-289 | c.3533G > A, p.R1178Q | 9.6 | M | N | PU | FSGS | ESRD | 1.4 | |
| SRNS-290 | c.3533G > A, p.R1178Q | 6.2 | F | Y | PU | MesPGN | ESRD | 3.0 | |
| SRNS-291 | c.1853T > C, p.L618P | At birth | M | N | CKD | ND | ESRD | 0.3 | |
| SRNS-144 | c.1682G > A, p.R561H | 6.0 | M | N | NS | FSGS | ESRD | 3.4 | |
| SRNS-287 | c.1411dupA, p.I471Nfs a
| 5.5 | F | N | NS | FSGS | ESRD | 1.5 | |
| SRNS-288 | c.1484A > C, p.Q495P a
| 3.5 | M | N | PU | FSGS | ESRD | 2.1 | |
| SRNS-284 | mtDNA3243A > G | 18.9 | F | Y | PU | DMS | CKD | NA | |
| SRNS-285 | mtDNA3243A > G | 11.8 | F | Y | PU | FSGS | ESRD | 6.0 | |
| SRNS-286 | mtDNA3243A > G | 9.8 | F | N | PU | FSGS | ESRD | 5.3 | |
| SRNS-283 | c.736 − 2A > G in intron 7 a | 3.4 | M | N | NS | MNP | Normal eGFR | NA | |
| SRNS-267 | c.785C > T, p.S262F | 3.5 | M | Y | NS | FSGS | ESRD | 1.2 | |
| SRNS-279 | c. 668G > A, p.R223Q | 2.1 | F | N | NS | FSGS | ESRD | 1.86 | |
| SRNS-65 | c.2305A > T, p.L769* a | 7.7 | M | N | PU | FSGS | Normal eGFR | NA | |
| SRNS-37 | c.523C > G, p.R175G a | 8.5 | F | N | PU | FSGS | ESRD | 2.3 | |
| SRNS-199 | c.4793T > G, p.L1598R | 0.5 | F | N | NS | DMS | ESRD | 0.9 | |
| SRNS-221 | c.194A > T, p.K65M (homozygote) | At birth | F | NA | NA | ND | Death | 0.0 | |
| SRNS-272 | c.501C > G, p.C167W | 0.5 | M | N | PU | FSGS | CKD | NA | |
| SRNS-278 | c.794_801del8, p.E265Afs*18 | 9.6 | M | Y | PU | FSGS | Normal eGFR | NA | |
| SRNS-168 | c.392A > G, p.D131G a
| At birth | F | N | NS | FSGS | ESRD | 0.3 | |
| SRNS-220 | c.3G > T, p.M1? | At birth | M | Y | NS | ND | ESRD | 0.0 | |
a Novel mutations. b Sex of patients with WT1 mutations and sex reversal, followed by their karyotypes. NA, not available; ND, not done; NS, nephrotic syndrome; PU, proteinuria; CKD, chronic kidney disease; ESRD, end-stage renal disease; eGFR, estimated glomerular filtration rate; FSGS, focal segmental glomerulosclerosis; DMS, diffuse mesangial sclerosis; MesPGN, mesangial proliferative glomerulonephritis; MNP, membranous nephropathy; M, male; F, female; Y, yes; N, no.