Literature DB >> 35675446

Evaluation of functional MRI-based human brain parcellation: a review.

Pantea Moghimi1, Anh The Dang2, Quan Do2, Theoden I Netoff3, Kelvin O Lim4, Gowtham Atluri2.   

Abstract

Brain parcellations play a crucial role in the analysis of brain imaging data sets, as they can significantly affect the outcome of the analysis. In recent years, several novel approaches for constructing MRI-based brain parcellations have been developed with promising results. In the absence of ground truth, several evaluation approaches have been used to evaluate currently available brain parcellations. In this article, we review and critique methods used for evaluating functional brain parcellations constructed using fMRI data sets. We also describe how some of these evaluation methods have been used to estimate the optimal parcellation granularity. We provide a critical discussion of the current approach to the problem of identifying the optimal brain parcellation that is suited for a given neuroimaging study. We argue that the criteria for an optimal brain parcellation must depend on the application the parcellation is intended for. We describe a teleological approach to the evaluation of brain parcellations, where brain parcellations are evaluated in different contexts and optimal brain parcellations for each context are identified separately. We conclude by discussing several directions for further research that would result in improved evaluation strategies.

Entities:  

Keywords:  brain parcellation; evaluation; fMRI; functional neuroimaging

Mesh:

Year:  2022        PMID: 35675446      PMCID: PMC9291407          DOI: 10.1152/jn.00411.2021

Source DB:  PubMed          Journal:  J Neurophysiol        ISSN: 0022-3077            Impact factor:   2.974


  160 in total

1.  Validating the independent components of neuroimaging time series via clustering and visualization.

Authors:  Johan Himberg; Aapo Hyvärinen; Fabrizio Esposito
Journal:  Neuroimage       Date:  2004-07       Impact factor: 6.556

2.  Effect of prior cognitive state on resting state networks measured with functional connectivity.

Authors:  Anthony B Waites; Alexandra Stanislavsky; David F Abbott; Graeme D Jackson
Journal:  Hum Brain Mapp       Date:  2005-01       Impact factor: 5.038

3.  A cluster separation measure.

Authors:  D L Davies; D W Bouldin
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  1979-02       Impact factor: 6.226

4.  Functional connectivity during rested wakefulness predicts vulnerability to sleep deprivation.

Authors:  B T Thomas Yeo; Jesisca Tandi; Michael W L Chee
Journal:  Neuroimage       Date:  2015-02-17       Impact factor: 6.556

5.  Delayed stabilization and individualization in connectome development are related to psychiatric disorders.

Authors:  Tobias Kaufmann; Dag Alnæs; Nhat Trung Doan; Christine Lycke Brandt; Ole A Andreassen; Lars T Westlye
Journal:  Nat Neurosci       Date:  2017-02-20       Impact factor: 24.884

6.  Detecting network modules in fMRI time series: a weighted network analysis approach.

Authors:  Jeanette A Mumford; Steve Horvath; Michael C Oldham; Peter Langfelder; Daniel H Geschwind; Russell A Poldrack
Journal:  Neuroimage       Date:  2010-05-27       Impact factor: 6.556

7.  Optimization of rs-fMRI Pre-processing for Enhanced Signal-Noise Separation, Test-Retest Reliability, and Group Discrimination.

Authors:  William R Shirer; Heidi Jiang; Collin M Price; Bernard Ng; Michael D Greicius
Journal:  Neuroimage       Date:  2015-05-15       Impact factor: 6.556

8.  Structural and functional, empirical and modeled connectivity in the cerebral cortex of the rat.

Authors:  Antonio Díaz-Parra; Zachary Osborn; Santiago Canals; David Moratal; Olaf Sporns
Journal:  Neuroimage       Date:  2017-07-21       Impact factor: 6.556

9.  Aberrant default mode functional connectivity in early onset schizophrenia.

Authors:  Jinsong Tang; Yanhui Liao; Ming Song; Jia-Hong Gao; Bing Zhou; Changlian Tan; Tieqiao Liu; Yanqing Tang; Jindong Chen; Xiaogang Chen
Journal:  PLoS One       Date:  2013-07-29       Impact factor: 3.240

10.  Parcellating cortical functional networks in individuals.

Authors:  Danhong Wang; Randy L Buckner; Michael D Fox; Daphne J Holt; Avram J Holmes; Sophia Stoecklein; Georg Langs; Ruiqi Pan; Tianyi Qian; Kuncheng Li; Justin T Baker; Steven M Stufflebeam; Kai Wang; Xiaomin Wang; Bo Hong; Hesheng Liu
Journal:  Nat Neurosci       Date:  2015-11-09       Impact factor: 24.884

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  1 in total

1.  Chinese adult brain atlas with functional and white matter parcellation.

Authors:  Jingwen Zhu; Anqi Qiu
Journal:  Sci Data       Date:  2022-06-20       Impact factor: 8.501

  1 in total

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