Literature DB >> 35674951

Measuring Gene Expression via mRNA Abundance in Candida auris.

Mohd Wasi1, Remya Nair2, Nitesh Kumar Khandelwal3, Rajendra Prasad4.   

Abstract

The recently emerged human pathogenic yeast Candida auris has become a major global threat. As compared to other Candida species, C. auris often displays a high level of resistance to commonly used antifungals and poses additional therapeutic challenges. There is a great need to understand the molecular basis of its success as a drug-resistant human pathogen. The study of condition-specific gene expression can provide good cues of regulatory circuitry governing high drug resistance. Here, we describe the protocol of quantitative reverse transcription PCR (RT-qPCR) which can be conveniently employed as a highly reproducible method for measuring individual transcripts in C. auris cells.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Candida auris; Drug resistance; Polymerase chain reaction; Quantitative reverse transcription; RNA; Transcriptome

Mesh:

Substances:

Year:  2022        PMID: 35674951     DOI: 10.1007/978-1-0716-2417-3_11

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  4 in total

1.  Irreversible heat inactivation of DNase I without RNA degradation.

Authors:  I Wiame; S Remy; R Swennen; L Sági
Journal:  Biotechniques       Date:  2000-08       Impact factor: 1.993

2.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

3.  Genomic insights into multidrug-resistance, mating and virulence in Candida auris and related emerging species.

Authors:  José F Muñoz; Lalitha Gade; Nancy A Chow; Vladimir N Loparev; Phalasy Juieng; Elizabeth L Berkow; Rhys A Farrer; Anastasia P Litvintseva; Christina A Cuomo
Journal:  Nat Commun       Date:  2018-12-17       Impact factor: 14.919

4.  ABC Transporter Genes Show Upregulated Expression in Drug-Resistant Clinical Isolates of Candida auris: A Genome-Wide Characterization of ATP-Binding Cassette (ABC) Transporter Genes.

Authors:  Mohd Wasi; Nitesh Kumar Khandelwal; Alexander J Moorhouse; Remya Nair; Poonam Vishwakarma; Gustavo Bravo Ruiz; Zoe K Ross; Alexander Lorenz; Shivaprakash M Rudramurthy; Arunaloke Chakrabarti; Andrew M Lynn; Alok K Mondal; Neil A R Gow; Rajendra Prasad
Journal:  Front Microbiol       Date:  2019-07-16       Impact factor: 5.640

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.