Literature DB >> 35673428

Meta-analysis of HNF1A-MODY3 variants among human population.

Rachna Behl1, Nishtha Malhotra2, Vinay Joshi3, Shruti Poojary4, Sanniya Middha1, Shalini Gupta5, Arinola B Olaonipekun6, Ikechukwu Okoye7, Bhushan Wagh8, Dibyendu Biswas9, Chukwuemelie Aginah10, Bhavya Saini2, Chinaza Nwanya11, Sopuluchukwu Ugwu12, Modupe M Anthony13, Xuanyu S Fang14, Ogunfile Foluso15, Abdulrahman Tudu Ibrahim16.   

Abstract

Background: Previously, numerous case-control studies have highlighted variants responsible for Maturity onset diabetes of young (MODY). However, these studies have been conducted among diverse populations and hence yielded contradictory results. We, therefore, performed a meta-analysis to precisely find the association of SNPs with the disease for the HNF1A gene. Objective: Meta-analysis of clinically defined studies deciphering mutations in the HNF1A gene responsible for the development of MODY3 was conducted among various populations to determine associations using statistical approaches.
Methods: The curation of 505 research articles published between the years 2000-2021 was carried out. Visualization of data-related protocols and statistical-analysis were conducted, which led to the identification of highly prevalent mutations among different populations (majorly Europe). Further comparison between the frequencies of the control (healthy population) and test (diseased population) dataset generated through curation was performed.
Results: We identified nine MODY3 mutations (rs587776825, rs1169288, rs1800574, rs2464196, rs137853244, rs137853238, rs587780357, rs137853240 and rs137853243) at the genome-wide significance level ( p < 5.0 × 10-8). The present study confirmed that the data does not follow a normal distribution. Further, the data was confirmed to be a more homogenous type with frequencies having a significant association with the disease.
Conclusion: This meta-analysis found significant associations of mutations in HNF1A with MODY3, consistent with previous studies. Our findings should help elucidate the mutations in a compiled form responsible for causing MODY3. Supplementary Information: The online version contains supplementary material available at 10.1007/s40200-022-00975-8. © Springer Nature Switzerland AG 2022.

Entities:  

Keywords:  HNF1A; MODY3; Meta-analysis; Single nucleotide polymorphisms

Year:  2022        PMID: 35673428      PMCID: PMC9167412          DOI: 10.1007/s40200-022-00975-8

Source DB:  PubMed          Journal:  J Diabetes Metab Disord        ISSN: 2251-6581


  34 in total

1.  Successful maintenance on sulphonylurea therapy and low diabetes complication rates in a HNF1A-MODY cohort.

Authors:  S Bacon; M P Kyithar; S R Rizvi; E Donnelly; A McCarthy; M Burke; K Colclough; S Ellard; M M Byrne
Journal:  Diabet Med       Date:  2015-11-17       Impact factor: 4.359

Review 2.  Maturity-onset diabetes of the young: From a molecular basis perspective toward the clinical phenotype and proper management.

Authors:  Sofia Castro Oliveira; João Sérgio Neves; Antonio Pérez; Davide Carvalho
Journal:  Endocrinol Diabetes Nutr (Engl Ed)       Date:  2019-11-11       Impact factor: 1.417

3.  A case of digenic maturity onset diabetes of the young with heterozygous variants in both HNF1Α and HNF1Β genes.

Authors:  Konstantina Patouni; Ondrej Cinek; Stepanka Pruhova; Lenka Elblova; Maria Xatzipsalti; Amalia Sertedaki; Andriani Vazeou
Journal:  Eur J Med Genet       Date:  2021-06-20       Impact factor: 2.708

Review 4.  Monogenic Diabetes in Children and Adolescents: Recognition and Treatment Options.

Authors:  May Sanyoura; Louis H Philipson; Rochelle Naylor
Journal:  Curr Diab Rep       Date:  2018-06-22       Impact factor: 4.810

5.  The prevalence of monogenic diabetes in Australia: the Fremantle Diabetes Study Phase II.

Authors:  Timothy Me Davis; Ashley E Makepeace; Sian Ellard; Kevin Colclough; Kirsten Peters; Andrew Hattersley; Wendy A Davis
Journal:  Med J Aust       Date:  2017-10-16       Impact factor: 7.738

6.  Clinical features and treatment of maturity onset diabetes of the young (MODY).

Authors:  Daphne Sl Gardner; E Shyong Tai
Journal:  Diabetes Metab Syndr Obes       Date:  2012-05-01       Impact factor: 3.168

7.  The nature of correlation perception in scatterplots.

Authors:  Ronald A Rensink
Journal:  Psychon Bull Rev       Date:  2017-06

8.  Maturity-onset diabetes of the young: update and perspectives on diagnosis and treatment.

Authors:  Kyung Mi Jang
Journal:  Yeungnam Univ J Med       Date:  2020-01-09

9.  Significance testing and genomic inflation factor using high-density genotypes or whole-genome sequence data.

Authors:  Sanne van den Berg; Jérémie Vandenplas; Fred A van Eeuwijk; Marcos S Lopes; Roel F Veerkamp
Journal:  J Anim Breed Genet       Date:  2019-06-19       Impact factor: 2.380

10.  Hardy-Weinberg Equilibrium in the Large Scale Genomic Sequencing Era.

Authors:  Nikita Abramovs; Andrew Brass; May Tassabehji
Journal:  Front Genet       Date:  2020-03-13       Impact factor: 4.599

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