Literature DB >> 35670904

Identification of Antigenic Properties of Acinetobacter baumannii Proteins as Novel Putative Vaccine Candidates Using Reverse Vaccinology Approach.

Tohid Piri-Gharaghie1, Abbas Doosti2, Seyed Abbas Mirzaei1,3.   

Abstract

Multidrug-resistant Acinetobacter baumannii (A. baumannii) infections are becoming more prevalent all over the world. As a cost-effective and preventative method, vaccination seems to be required against this bacterium. In the present study, subtractive proteomics along with reverse vaccinology approaches was used to predict suitable therapeutics against A. baumannii. Using the Vaxign online tool, we studied over 35 genomes of A. baumannii strains and chose outer membrane and secreted proteins of A. baumannii 1656-2 as possible vaccine candidates. Then, investigations were performed on the immunogenicity, antigenic characteristics, physicochemical properties, B-cell and MHC class I, and MHC class II molecules epitope densities of proteins. After optimizing the codon of the proteins, the pcDNA3.1( +) expression construct was designed and the immunogenicity, allergenicity, and physicochemical properties of the vaccine construct were predicted. Hcp and OmpC proteins were predicted as extracellular and outer membrane proteins, respectively. These proteins interact with 10 other proteins to form a network of protein interactions with virulence properties. Immunoassays of Hcp and OmpC proteins showed antigenicity of 0.88 and 0.79, respectively. These proteins have 5 structural cell epitope points and 5 linear B epitope points. They are also able to bind to different HLA alleles of MCH class I/class II as selected immunogenic proteins and designed non-allergenic structures with solubility of 0.650 and immunogenicity score of 0.91. The results of this "in silico" study indicate high specificity and the development of a significant humoral and cellular immune response. It can be concluded that the Hcp and OmpC dual vaccine construct is one of the promising candidates against A. baumannii. The findings of this "in silico" study show excellent specificity and the emergence of a substantial humoral and cellular immune response. This is a computer-based study that needs to be tested in vitro and in vivo to corroborate the conclusions of the vaccine design procedures.
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  A. baumannii; Antigen; Reverse vaccinology; Vaccine candidates

Mesh:

Substances:

Year:  2022        PMID: 35670904     DOI: 10.1007/s12010-022-03995-5

Source DB:  PubMed          Journal:  Appl Biochem Biotechnol        ISSN: 0273-2289            Impact factor:   3.094


  28 in total

1.  Antibiotic resistance-the need for global solutions.

Authors:  Ramanan Laxminarayan; Adriano Duse; Chand Wattal; Anita K M Zaidi; Heiman F L Wertheim; Nithima Sumpradit; Erika Vlieghe; Gabriel Levy Hara; Ian M Gould; Herman Goossens; Christina Greko; Anthony D So; Maryam Bigdeli; Göran Tomson; Will Woodhouse; Eva Ombaka; Arturo Quizhpe Peralta; Farah Naz Qamar; Fatima Mir; Sam Kariuki; Zulfiqar A Bhutta; Anthony Coates; Richard Bergstrom; Gerard D Wright; Eric D Brown; Otto Cars
Journal:  Lancet Infect Dis       Date:  2013-11-17       Impact factor: 25.071

Review 2.  Biofilm formation in Acinetobacter baumannii.

Authors:  Francesca Longo; Claudia Vuotto; Gianfranco Donelli
Journal:  New Microbiol       Date:  2014-04-01       Impact factor: 2.479

3.  OmpA: A Flexible Clamp for Bacterial Cell Wall Attachment.

Authors:  Firdaus Samsudin; Maite L Ortiz-Suarez; Thomas J Piggot; Peter J Bond; Syma Khalid
Journal:  Structure       Date:  2016-11-17       Impact factor: 5.006

4.  Purification of integral outer-membrane protein OmpC, a surface antigen from Salmonella typhi for structure-function studies: a method applicable to enterobacterial major outer-membrane protein.

Authors:  A Arockiasamy; S Krishnaswamy
Journal:  Anal Biochem       Date:  2000-07-15       Impact factor: 3.365

5.  Salmonella Typhi Porins OmpC and OmpF Are Potent Adjuvants for T-Dependent and T-Independent Antigens.

Authors:  Marisol Pérez-Toledo; Nuriban Valero-Pacheco; Rodolfo Pastelin-Palacios; Cristina Gil-Cruz; Christian Perez-Shibayama; Mario A Moreno-Eutimio; Ingeborg Becker; Sonia Mayra Pérez-Tapia; Lourdes Arriaga-Pizano; Adam F Cunningham; Armando Isibasi; Laura C Bonifaz; Constantino López-Macías
Journal:  Front Immunol       Date:  2017-03-09       Impact factor: 7.561

Review 6.  Microbe-host interactions: structure and role of Gram-negative bacterial porins.

Authors:  Stefania Galdiero; Annarita Falanga; Marco Cantisani; Rossella Tarallo; Maria Elena Della Pepa; Virginia D'Oriano; Massimiliano Galdiero
Journal:  Curr Protein Pept Sci       Date:  2012-12       Impact factor: 3.272

7.  How Porin Heterogeneity and Trade-Offs Affect the Antibiotic Susceptibility of Gram-Negative Bacteria.

Authors:  Thomas Ferenci; Katherine Phan
Journal:  Genes (Basel)       Date:  2015-10-21       Impact factor: 4.096

Review 8.  The Mechanisms of Disease Caused by Acinetobacter baumannii.

Authors:  Faye C Morris; Carina Dexter; Xenia Kostoulias; Muhammad Ikhtear Uddin; Anton Y Peleg
Journal:  Front Microbiol       Date:  2019-07-17       Impact factor: 5.640

9.  In silico design of a T-cell epitope vaccine candidate for parasitic helminth infection.

Authors:  Ayat Zawawi; Ruth Forman; Hannah Smith; Iris Mair; Murtala Jibril; Munirah H Albaqshi; Andrew Brass; Jeremy P Derrick; Kathryn J Else
Journal:  PLoS Pathog       Date:  2020-03-23       Impact factor: 6.823

10.  Reverse vaccinology approach for the identification and characterization of outer membrane proteins of Shigella flexneri as potential cellular- and antibody-dependent vaccine candidates.

Authors:  Chiuan Yee Leow; Ada Kazi; Che Muhammad Khairul Hisyam Ismail; Candy Chuah; Boon Huat Lim; Chiuan Herng Leow; Kirnpal Kaur Banga Singh
Journal:  Clin Exp Vaccine Res       Date:  2020-01-31
View more
  1 in total

1.  Targeting the MALAT1 gene with the CRISPR/Cas9 technique in prostate cancer.

Authors:  Soraya Ahmadi-Balootaki; Abbas Doosti; Mojtaba Jafarinia; Hamed Reza Goodarzi
Journal:  Genes Environ       Date:  2022-09-26
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.