| Literature DB >> 35668768 |
Chao-Yi Wang1,2, Xiao-Han Liu1,2, Yao-Yao Zheng1,2, Xing-Yan Ning1,2, Ya-Hui Zhang1,2, Xiu-Mei Fu1,2, Xin Li1,2, Chang-Lun Shao1,2, Chang-Yun Wang1,2,3.
Abstract
Three new 2,5-diketopiperazines, speramide C (1), 3,21-epi-taichunamide F (2), and 2-epi-amoenamide C (3), along with four known analogs (4-7), were obtained from the sponge-derived fungus Aspergillus sclerotiorum GDST-2013-0501 collected from the South China Sea. The chemical structures of new compounds were elucidated by analyzing NMR and MS spectroscopy data, and their absolute configurations were determined by electronic circular dichroism (ECD) calculations. Compound 1 represents the first prenylated indole alkaloid with an ethylene oxide ring at the isopentenyl side chain. Compound 4 displayed DNA topoisomerase I inhibitory activity and antibacterial activity against Staphylococcus epidermidis. The low cytotoxic or non-cytotoxic compound 4 displayed DNA topoisomerase I inhibitory activity, which could provide a starting point for the development of antitumor agents.Entities:
Keywords: 2; 5-diketopiperazines; Aspergillus sclerotiorum; DNA topoisomerase I; bicyclo[2.2.2]diazaoctane; sponge-derived fungus
Year: 2022 PMID: 35668768 PMCID: PMC9164150 DOI: 10.3389/fmicb.2022.808532
Source DB: PubMed Journal: Front Microbiol ISSN: 1664-302X Impact factor: 6.064
Figure 1The core structure of 2,5-DKPs and the substructure of common 2,5-DKPs cyclized from Try and Pro.
Figure 2The structures of the isolated compounds.
1H (500 MHz) NMR data and 13C (125 MHz) NMR data for 1–3 in DMSO-d6.
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| 2 | 98.5, C | 151.9, C | 89.0, C | |||
| 3 | 96.4, C | 77.5, C | 197.1, C | |||
| 3a | 119.5, C | 128.9, C | 113.4, C | |||
| 4 | 125.4, CH | 6.98, d (8.0) | 123.7, CH | 7.36, d (8.0) | 125.3, CH | 7.28, d (8.3) |
| 5 | 105.8, CH | 6.04, d (8.0) | 116.4, CH | 6.88, d (8.0) | 108.6, CH | 6.32, d (8.3) |
| 5a | 154.7, C | 153.9, C | 161.8, C | |||
| 7 | 75.8, C | 76.2, C | 75.8, C | |||
| 8 | 127.8, CH | 5.55, d (9.5) | 133.0, CH | 5.93, d (10.2) | 127.6, CH | 5.77, d (10.0) |
| 9 | 118.6, CH | 6.85, d (9.5) | 115.4, CH | 7.76, d (10.2) | 119.5, CH | 7.25, d (10.0) |
| 9a | 102.8, C | 111.4, C | 104.7, C | |||
| 9b | 148.4, C | 139.6, C | 154.9, C | |||
| 10 | 28.3, CH3 | 1.33, s or 1.34, s | 27.5, CH3 | 1.42, s | 27.1, CH3 | 1.46, s |
| 11 | 28.1, CH3 | 1.34, s or 1.33, s | 27.4, CH3 | 1.40, s | 25.7, CH3 | 1.34, s |
| 12 | 39.3, CH2 | 2.35, t (12.3) 2.67, dd (12.6, 7.0) | 75.6, CH | 4.12, s | 80.7, CH | 6.02, s |
| 13 | 63.2, CH | 4.63, dd (11.8, 7.0) | 61.8, C | 60.4, C | ||
| 14 | 166.8, C | 168.0, C | 167.9, C | |||
| 16 | 44.9, CH2 | 3.38, m | 43.9, CH2 | 3.40, t (6.4) | 43.4, CH2 | 3.20, m; 3.33, m |
| 17 | 20.9, CH2 | 1.86, m | 24.0, CH2 | 2.03, m; 1.84, m | 24.1, CH2 | 1.74, m; 1.96, m |
| 18 | 36.6, CH2 | 2.06, m | 28.7, CH2 | 2.55,m; 1.84, m | 28.5, CH2 | 2.45, m |
| 19 | 89.0, C | 66.3, C | 66.4, C | |||
| 20 | 166.0, C | 171.6, C | 172.1, C | |||
| 22 | 60.8, CH2 | 3.41, m | 30.0, CH2 | 2.03, m; 1.84, m | 29.4, CH2 | 1.78, m; 1.98, m |
| 23 | 91.7, CH | 3.57, dd (7.3, 3.0) | 49.5, CH | 3.53, dd (9.9, 8.0) | 41.3, CH | 2.88, dd (10.5, 5.9) |
| 24 | 46.9, C | 36.1, C | 40.2, C | |||
| 25 | 17.8, CH3 | 0.75, s | 13.1, CH3 | 1.15, s | 14.7, CH3 | 0.50, s |
| 26 | 21.8, CH3 | 1.30, s | 22.4, CH3 | 1.30, s | 20.3, CH3 | 1.06, s |
| 12-OMe | 59.5, CH3 | 3.31, s | 54.4, CH3 | 3.29, s | ||
| 1-NH | 6.85, s | 6.24, s | ||||
| 21-NH | 7.85, s | 8.08, s | ||||
| 3-OH | 4.59, br s | 6.26, s | ||||
| 19-OH | 6.74, s | |||||
Figure 3Key 2D NMR correlations for 1.
Figure 4Experimental and calculated ECD spectra of compound 1.
Figure 5Key 2D NMR correlations for 2 and 3.
Figure 6Experimental and calculated ECD spectra of compound 2.
Figure 7Experimental and calculated ECD spectra of compound 3.