Literature DB >> 35667639

Transfer learning for cognitive reserve quantification.

Xi Zhu1, Yi Liu2, Christian G Habeck3, Yaakov Stern4, Seonjoo Lee5.   

Abstract

Cognitive reserve (CR) has been introduced to explain individual differences in susceptibility to cognitive or functional impairment in the presence of age or pathology. We developed a deep learning model to quantify the CR as residual variance in memory performance using the Structural Magnetic Resonance Imaging (sMRI) data from a lifespan healthy cohort. The generalizability of the sMRI-based deep learning model was tested in two independent healthy and Alzheimer's cohorts using transfer learning framework. Structural MRIs were collected from three cohorts: 495 healthy adults (age: 20-80) from RANN, 620 healthy adults (age: 36-100) from lifespan Human Connectome Project Aging (HCPA), and 941 adults (age: 55-92) from Alzheimer's Disease Neuroimaging Initiative (ADNI). Region of interest (ROI)-specific cortical thickness and volume measures were extracted using the Desikan-Killiany Atlas. CR was quantified by residuals which subtract the predicted memory from the true memory. Cascade neural network (CNN) models were used to train RANN dataset for memory prediction. Transfer learning was applied to transfer the T1 imaging-based model from source domain (RANN) to the target domains (HCPA or ADNI). The CNN model trained on the RANN dataset exhibited strong linear correlation between true and predicted memory based on the T1 cortical thickness and volume predictors. In addition, the model generated from healthy lifespan data (RANN) was able to generalize to an independent healthy lifespan data (HCPA) and older demented participants (ADNI) across different scanner types. The estimated CR was correlated with CR proxies such education and IQ across all three datasets. The current findings suggest that the transfer learning approach is an effective way to generalize the residual-based CR estimation. It is applicable to various diseases and may flexibly incorporate different imaging modalities such as fMRI and PET, making it a promising tool for scientific and clinical purposes.
Copyright © 2022 The Author(s). Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  ADNI; Cognitive reserve; HCP; MRI; Transfer Learning

Mesh:

Year:  2022        PMID: 35667639      PMCID: PMC9271605          DOI: 10.1016/j.neuroimage.2022.119353

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   7.400


  41 in total

1.  An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest.

Authors:  Rahul S Desikan; Florent Ségonne; Bruce Fischl; Brian T Quinn; Bradford C Dickerson; Deborah Blacker; Randy L Buckner; Anders M Dale; R Paul Maguire; Bradley T Hyman; Marilyn S Albert; Ronald J Killiany
Journal:  Neuroimage       Date:  2006-03-10       Impact factor: 6.556

2.  Association of premorbid intellectual function with cerebral metabolism in Alzheimer's disease: implications for the cognitive reserve hypothesis.

Authors:  G E Alexander; M L Furey; C L Grady; P Pietrini; D R Brady; M J Mentis; M B Schapiro
Journal:  Am J Psychiatry       Date:  1997-02       Impact factor: 18.112

Review 3.  Recent publications from the Alzheimer's Disease Neuroimaging Initiative: Reviewing progress toward improved AD clinical trials.

Authors:  Michael W Weiner; Dallas P Veitch; Paul S Aisen; Laurel A Beckett; Nigel J Cairns; Robert C Green; Danielle Harvey; Clifford R Jack; William Jagust; John C Morris; Ronald C Petersen; Andrew J Saykin; Leslie M Shaw; Arthur W Toga; John Q Trojanowski
Journal:  Alzheimers Dement       Date:  2017-03-22       Impact factor: 21.566

4.  A deep learning architecture for image representation, visual interpretability and automated basal-cell carcinoma cancer detection.

Authors:  Angel Alfonso Cruz-Roa; John Edison Arevalo Ovalle; Anant Madabhushi; Fabio Augusto González Osorio
Journal:  Med Image Comput Comput Assist Interv       Date:  2013

5.  Reliability and validity of composite scores from the NIH Toolbox Cognition Battery in adults.

Authors:  Robert K Heaton; Natacha Akshoomoff; David Tulsky; Dan Mungas; Sandra Weintraub; Sureyya Dikmen; Jennifer Beaumont; Kaitlin B Casaletto; Kevin Conway; Jerry Slotkin; Richard Gershon
Journal:  J Int Neuropsychol Soc       Date:  2014-06-24       Impact factor: 2.892

6.  The Lifespan Human Connectome Project in Aging: An overview.

Authors:  Susan Y Bookheimer; David H Salat; Melissa Terpstra; Beau M Ances; Deanna M Barch; Randy L Buckner; Gregory C Burgess; Sandra W Curtiss; Mirella Diaz-Santos; Jennifer Stine Elam; Bruce Fischl; Douglas N Greve; Hannah A Hagy; Michael P Harms; Olivia M Hatch; Trey Hedden; Cynthia Hodge; Kevin C Japardi; Taylor P Kuhn; Timothy K Ly; Stephen M Smith; Leah H Somerville; Kâmil Uğurbil; Andre van der Kouwe; David Van Essen; Roger P Woods; Essa Yacoub
Journal:  Neuroimage       Date:  2018-10-15       Impact factor: 6.556

7.  Is residual memory variance a valid method for quantifying cognitive reserve? A longitudinal application.

Authors:  Laura B Zahodne; Jennifer J Manly; Adam M Brickman; Atul Narkhede; Erica Y Griffith; Vanessa A Guzman; Nicole Schupf; Yaakov Stern
Journal:  Neuropsychologia       Date:  2015-09-05       Impact factor: 3.139

8.  Extending the Human Connectome Project across ages: Imaging protocols for the Lifespan Development and Aging projects.

Authors:  Michael P Harms; Leah H Somerville; Beau M Ances; Jesper Andersson; Deanna M Barch; Matteo Bastiani; Susan Y Bookheimer; Timothy B Brown; Randy L Buckner; Gregory C Burgess; Timothy S Coalson; Michael A Chappell; Mirella Dapretto; Gwenaëlle Douaud; Bruce Fischl; Matthew F Glasser; Douglas N Greve; Cynthia Hodge; Keith W Jamison; Saad Jbabdi; Sridhar Kandala; Xiufeng Li; Ross W Mair; Silvia Mangia; Daniel Marcus; Daniele Mascali; Steen Moeller; Thomas E Nichols; Emma C Robinson; David H Salat; Stephen M Smith; Stamatios N Sotiropoulos; Melissa Terpstra; Kathleen M Thomas; M Dylan Tisdall; Kamil Ugurbil; Andre van der Kouwe; Roger P Woods; Lilla Zöllei; David C Van Essen; Essa Yacoub
Journal:  Neuroimage       Date:  2018-09-24       Impact factor: 6.556

9.  MRIQC: Advancing the automatic prediction of image quality in MRI from unseen sites.

Authors:  Oscar Esteban; Daniel Birman; Marie Schaer; Oluwasanmi O Koyejo; Russell A Poldrack; Krzysztof J Gorgolewski
Journal:  PLoS One       Date:  2017-09-25       Impact factor: 3.240

10.  Convolutional neural networks for classification of Alzheimer's disease: Overview and reproducible evaluation.

Authors:  Junhao Wen; Elina Thibeau-Sutre; Mauricio Diaz-Melo; Jorge Samper-González; Alexandre Routier; Simona Bottani; Didier Dormont; Stanley Durrleman; Ninon Burgos; Olivier Colliot
Journal:  Med Image Anal       Date:  2020-05-01       Impact factor: 8.545

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