| Literature DB >> 35662083 |
Akshata Kishore Karekar1, Sucheta Prakash Dandekar2.
Abstract
Gynaecological cancers are the major cause of cancer-related deaths in Indian women. The poor prognosis and lack of symptoms in the early stages make early cancer diagnosis difficult. The absence of mandatory screening programmes and the lack of awareness pose to be a real challenge in a developing economy as India. Prompt intervention is required to enhance cancer patient survival statistics and to lessen the social and financial burden. Conventional screening and cytological techniques employed currently have helped to reduce the incidence of cancers considerably. However, these tests offer low sensitivity and specificity and are not widely used for risk assessment, leading to inadequate early-stage cancer diagnosis. The accomplishment of Human Genome Project (HGP) has opened doors to exciting 'omics' platforms. Promising research in genomics and proteomics has revolutionized cancer detection and screening methodologies by providing more insights in the gene expression, protein function and how specific mutation in specific genes corresponds to a particular phenotype. However, these are incompetent to translate the information into clinical applicability. Various factors such as low sensitivity, diurnal variation in protein, poor reproducibility and analytical variables are prime hurdles. Thus the focus has been shifted to metabolomics, which is a much younger platform compared to genomics and proteomics. Metabolomics focuses on endpoint metabolites, which are final products sustained in the response to genetic or environmental changes by a living system. As a result, the metabolome indicates the cell's functional condition, which is directly linked to its phenotype. Metabolic profiling aims to study the changes occurred in metabolic pathways. This metabolite profile is capable of differentiating the healthy individuals from those having cancer. The pathways that a cell takes in turning malignant are exceedingly different, owing to the fact that transformation of healthy cells to abnormal cells is linked with significant metabolic abnormalities. This review is aimed to discuss metabolomics and its potential role in early diagnosis of gynaecological cancers, viz. breast, ovarian and cervical cancer.Entities:
Keywords: Biomarker; NMR; cancer metabolomics; early cancer detection; metabolic profiling
Mesh:
Year: 2021 PMID: 35662083 PMCID: PMC9347249 DOI: 10.4103/ijmr.IJMR_239_19
Source DB: PubMed Journal: Indian J Med Res ISSN: 0971-5916 Impact factor: 5.274
Overview of significant research carried out using metabolomics approach in breast, ovarian and cervical cancer
| Study | Cancer type | Biomarkers | Platform |
|---|---|---|---|
| Odunsi | Ovarian | Detection of EOC: 100 per cent | 1H-NMR |
| Denkert | Ovarian | Enzymes regulating pyrimidine metabolism | GC-TOF |
| Woo | Breast, Cervical, Ovarian | BrCa: ↑ 5-hydroxymethyl-2-deoxyuridine and 8-hydroxy-2-deoxyguanosine, 5-hydroxymethyl-2-deoxyuridine, 8-hydroxy-2-deoxyguanosine | GC/MS, LC-MS |
| Kim | Breast | Urine metabolites (multivariate classification) | GC/MS |
| Slupsky | Breast and Ovarian | Supressed TCA and urea cycle; ↓glucose; ↑amino acids transports | NMR |
| Oakman | Breast | Differential metabolites were obtained for metastatic, early patients and control | NMR |
| Li | Breast | Predicted presence of cancer with 69 per cent sensitivity and 94 per cent specificity | HR-MAS MR |
| Fong | Ovarian | Changes in glycolysis; β-oxidation of fatty acids, phenylalanine catabolism; aminobutyrate; isoforms of tocopherols; N-acetyl aspartate; N-acetyl-aspartly-glutamate | GC/MS, LC-MS/MS |
| Budczies | Breast | Detection rate for this biomarker: cytidine-5-phosphate/pentadecanoic acid ratio | GC-TOF-MS |
| Hasim | Cervical | Plasma-free amino acids | HPLC |
| Elia | Cervical | 3-hexanone, hexanal, dodecane, 4-methyl and 3-ethylcyclopentanone | GC/MS |
| Huang | Breast | Found taurine, hypotaurine, glutamate and aspartate pathway metabolites | LC-MS/TOF, GC-TOF-MS |
| Ke C | Ovarian | EOC primary: 37 metabolites identified-abnormal lipid metabolism, energy disorders | LC/MS |
| Yang W | Ovarian | 2-piperidinone and 1-heptadecanoylglycerophosphoethanolamine | UPLC/Q-TOF MS |
| Zhou | Cervical | Cer (d18:1/16:0), PC (15:0/16:0), PC (16:0/16:0), PE (16:0/20:0), PC (14:0/20:0), PS [17:0/22:2 (13Z,16Z)], PG [21:0/22:4 (7Z,10Z,13Z,16Z)] and SM (d18:1/20:0) | UPLC/Q-TOF MS |
| His M | Breast | Acetylcarnitine (Positive association) | QTRAP5500-MS |
| Paraskevaidi M | Cervical | Detection of high risk HPV strain | LA-REIMS |
| Pappa KI | Cervical | Perturbance in normal pathway was noted in cancerous cell line. SiHa and HeLa cell line took purine salvage pathway while C33A showed synthesis of cytidine through novel mechanism. | UPLC-MS/MS |
EOC, epithelial ovarian cancer; NMR, nuclear magnetic resonance; GC, gas chromatography; TOF, time-of-flight; MS, mass spectrometry; LCMS, liquid chromatography mass spectrometry; HR-MAS, high-resolution magic angle spinning; MR, magnetic resonance; HPLC, high-performance liquid chromatography; TCA, tricarboxylic acid