Literature DB >> 35661238

A novel method for determining postmortem interval based on the metabolomics of multiple organs combined with ensemble learning techniques.

Xiao-Jun Lu1,2, Jian Li1, Xue Wei1, Na Li1, Li-Hong Dang1, Guo-Shuai An1, Qiu-Xiang Du1, Qian-Qian Jin1, Jie Cao3, Ying-Yuan Wang4, Jun-Hong Sun5.   

Abstract

Determining postmortem interval (PMI) is one of the most challenging and essential endeavors in forensic science. Developments in PMI estimation can take advantage of machine learning techniques. Currently, applying an algorithm to obtain information on multiple organs and conducting joint analysis to accurately estimate PMI are still in the early stages. This study aimed to establish a multi-organ stacking model that estimates PMI by analyzing differential compounds of four organs in rats. In a total of 140 rats, skeletal muscle, liver, lung, and kidney tissue samples were collected at each time point after death. Ultra-performance liquid chromatography coupled with high-resolution mass spectrometry was used to determine the compound profiles of the samples. The original data were preprocessed using multivariate statistical analysis to determine discriminant compounds. In addition, three interrelated and increasingly complex patterns (single organ optimal model, single organ stacking model, multi-organ stacking model) were established to estimate PMI. The accuracy and generalized area under the receiver operating characteristic curve of the multi-organ stacking model were the highest at 93% and 0.96, respectively. Only 1 of the 14 external validation samples was misclassified by the multi-organ stacking model. The results demonstrate that the application of the multi-organ combination to the stacking algorithm is a potential forensic tool for the accurate estimation of PMI.
© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  Classification; Forensic pathology; Machine learning algorithms; Metabolomics; Postmortem interval; Stacking algorithm

Year:  2022        PMID: 35661238     DOI: 10.1007/s00414-022-02844-8

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  25 in total

Review 1.  Analysis of RNA in the estimation of post-mortem interval: a review of current evidence.

Authors:  Salvatore Scrivano; Matteo Sanavio; Pamela Tozzo; Luciana Caenazzo
Journal:  Int J Legal Med       Date:  2019-07-18       Impact factor: 2.686

2.  A novel method for post-mortem interval estimation based on tissue nano-mechanics.

Authors:  Fabio De-Giorgio; Matteo Nardini; Federica Foti; Eleonora Minelli; Massimiliano Papi; Ernesto d'Aloja; Vincenzo L Pascali; Marco De Spirito; Gabriele Ciasca
Journal:  Int J Legal Med       Date:  2019-03-27       Impact factor: 2.686

3.  Methods for determining time of death.

Authors:  Burkhard Madea
Journal:  Forensic Sci Med Pathol       Date:  2016-06-04       Impact factor: 2.007

4.  An evaluation of the objectivity and reproducibility of shear wave elastography in estimating the post-mortem interval: a tissue biomechanical perspective.

Authors:  Fabio De-Giorgio; Gabriele Ciasca; Ronel D'Amico; Pietro Trombatore; Anna D'Angelo; Pierluigi Rinaldi; Filippo Milano; Emanuela Locci; Marco De Spirito; Ernesto d'Aloja; Cesare Colosimo; Vincenzo L Pascali
Journal:  Int J Legal Med       Date:  2020-07-17       Impact factor: 2.686

5.  Factors affecting dental DNA in various real post-mortem conditions.

Authors:  Hussam Mansour; Oliver Krebs; Hans O Pinnschmidt; Nadine Griem; Ilona Hammann-Ehrt; Klaus Püschel
Journal:  Int J Legal Med       Date:  2019-09-11       Impact factor: 2.686

6.  Biochemical markers of time since death in cerebrospinal fluid: A first step towards "Forensomics".

Authors:  Pierre-Antoine Peyron; Sylvain Lehmann; Constance Delaby; Eric Baccino; Christophe Hirtz
Journal:  Crit Rev Clin Lab Sci       Date:  2019-06-06       Impact factor: 6.250

7.  Estimation of the post-mortem interval in human bones by infrared spectroscopy.

Authors:  Andreia Baptista; Mariana Pedrosa; Francisco Curate; Maria Teresa Ferreira; M P M Marques
Journal:  Int J Legal Med       Date:  2021-10-06       Impact factor: 2.686

8.  Postmortem proteomics to discover biomarkers for forensic PMI estimation.

Authors:  Kyoung-Min Choi; Angela Zissler; Eunjung Kim; Bianca Ehrenfellner; Eunji Cho; Se-In Lee; Peter Steinbacher; Ki Na Yun; Jong Hwan Shin; Jin Young Kim; Walter Stoiber; Heesun Chung; Fabio Carlo Monticelli; Jae-Young Kim; Stefan Pittner
Journal:  Int J Legal Med       Date:  2019-03-12       Impact factor: 2.686

9.  Human Bone Proteomes before and after Decomposition: Investigating the Effects of Biological Variation and Taphonomic Alteration on Bone Protein Profiles and the Implications for Forensic Proteomics.

Authors:  Hayley L Mickleburgh; Edward C Schwalbe; Andrea Bonicelli; Haruka Mizukami; Federica Sellitto; Sefora Starace; Daniel J Wescott; David O Carter; Noemi Procopio
Journal:  J Proteome Res       Date:  2021-03-08       Impact factor: 4.466

10.  Comparative use of aqueous humour 1H NMR metabolomics and potassium concentration for PMI estimation in an animal model.

Authors:  Emanuela Locci; Matteo Stocchero; Rossella Gottardo; Fabio De-Giorgio; Roberto Demontis; Matteo Nioi; Alberto Chighine; Franco Tagliaro; Ernesto d'Aloja
Journal:  Int J Legal Med       Date:  2020-11-20       Impact factor: 2.686

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