Literature DB >> 35658015

RNA exosome drives early B cell development via noncoding RNA processing mechanisms.

Brice Laffleur1, Carolina R Batista1, Wanwei Zhang1, Junghyun Lim1, Biao Yang1, Delphine Rossille2, Lijing Wu1, Jerson Estrella1, Gerson Rothschild1, Evangelos Pefanis3, Uttiya Basu1.   

Abstract

B cell development is linked to successful V(D)J recombination, allowing B cell receptor expression and ultimately antibody secretion for adaptive immunity. Germline noncoding RNAs (ncRNAs) are produced at immunoglobulin (Ig) loci during V(D)J recombination, but their function and posttranscriptional regulation are incompletely understood. Patients with trichohepatoenteric syndrome, characterized by RNA exosome pathway component mutations, exhibit lymphopenia, thus demonstrating the importance of ncRNA surveillance in B cell development in humans. To understand the role of RNA exosome in early B cell development in greater detail, we generated mouse models harboring a B cell-specific cre allele (Mb1cre), coupled to conditional inversion-deletion alleles of one RNA exosome core component (Exosc3) or RNase catalytic subunits (Exosc10 or Dis3). We noticed increased expression of RNA exosome subunits during V(D)J recombination, whereas a B cell developmental blockade at the pro-B cell stage was observed in the different knockout mice, overlapping with a lack of productive rearrangements of VDJ genes at the Ig heavy chain (Igh). This unsuccessful recombination prevented differentiation into pre-B cells, with accumulation of ncRNAs and up-regulation of the p53 pathway. Introduction of a prearranged Igh VDJ allele partly rescued the pre-B cell population in Dis3-deficient cells, although V-J recombination defects were observed at Ig light chain kappa (Igκ), preventing subsequent B cell development. These observations demonstrated that the RNA exosome complex is important for Igh and Igκ recombination and establish the relevance of RNA processing for optimal diversification at these loci during B cell development.

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Year:  2022        PMID: 35658015      PMCID: PMC9357289          DOI: 10.1126/sciimmunol.abn2738

Source DB:  PubMed          Journal:  Sci Immunol        ISSN: 2470-9468


  63 in total

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Journal:  Blood       Date:  2018-06-08       Impact factor: 22.113

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Journal:  Cell       Date:  1985-02       Impact factor: 41.582

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7.  Regulated large-scale nucleosome density patterns and precise nucleosome positioning correlate with V(D)J recombination.

Authors:  Sandhya R Pulivarthy; Mattia Lion; Guray Kuzu; Adam G W Matthews; Mark L Borowsky; John Morris; Robert E Kingston; Jonathan H Dennis; Michael Y Tolstorukov; Marjorie A Oettinger
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-03       Impact factor: 11.205

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Authors:  Fan Yang; Bogdan Tanasa; Rudi Micheletti; Kenneth A Ohgi; Aneel K Aggarwal; Michael G Rosenfeld
Journal:  Nature       Date:  2021-06-30       Impact factor: 69.504

9.  A conserved virus-induced cytoplasmic TRAMP-like complex recruits the exosome to target viral RNA for degradation.

Authors:  Jerome M Molleston; Leah R Sabin; Ryan H Moy; Sanjay V Menghani; Keiko Rausch; Beth Gordesky-Gold; Kaycie C Hopkins; Rui Zhou; Torben Heick Jensen; Jeremy E Wilusz; Sara Cherry
Journal:  Genes Dev       Date:  2016-07-15       Impact factor: 11.361

10.  Two Mutually Exclusive Local Chromatin States Drive Efficient V(D)J Recombination.

Authors:  Daniel J Bolland; Hashem Koohy; Andrew L Wood; Louise S Matheson; Felix Krueger; Michael J T Stubbington; Amanda Baizan-Edge; Peter Chovanec; Bryony A Stubbs; Kristina Tabbada; Simon R Andrews; Mikhail Spivakov; Anne E Corcoran
Journal:  Cell Rep       Date:  2016-06-02       Impact factor: 9.423

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  1 in total

1.  The mammalian SKIV2L RNA exosome is essential for early B cell development.

Authors:  Kun Yang; Jie Han; Jennifer G Gill; Jason Y Park; Meghana N Sathe; Jyothsna Gattineni; Tracey Wright; Christian Wysocki; M Teresa de la Morena; Nan Yan
Journal:  Sci Immunol       Date:  2022-06-03
  1 in total

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