Literature DB >> 35655960

Evolutionary Traits and Genomic Surveillance of SARS-CoV-2 in South America.

Pablo A Ortiz-Pineda1, Carlos H Sierra-Torres1,2.   

Abstract

Since the zoonotic event from which SARS-CoV-2 started infecting humans late in 2019, the virus has caused more than 5 million deaths and has infected over 500 million people around the world. The pandemic has had a severe impact on social and economic activities, with greater repercussions in low-income countries. South America, with almost 5% of the world's population, has reckoned with almost a fifth of the total people infected and more than 26% (>1/4) of the deceased. Fortunately, the full genome structure and sequence of SARS-CoV-2 have been rapidly obtained and studied thanks to all the scientific efforts and data sharing around the world. Such molecular analysis of SARS-CoV-2 dynamics showed that rates of mutation, similar to other members of the Coronaviridae family, along with natural selection forces, could result in the emergence of new variants; few of them might be of high consequence. However, this is a serious threat to controlling the pandemic and, of course, enduring the process of returning to normalization with the implicit monetary cost of such a contingency. The lack of updated knowledge in South America justifies the need to develop a structured genomic surveillance program of current and emerging SARS-CoV-2 variants. The modeling of the molecular events and microevolution of the virus will contribute to making better decisions on public health management of the pandemic and developing accurate treatments and more efficient vaccines.
Copyright © 2022 Pablo A. Ortiz-Pineda and Carlos H. Sierra-Torres.

Entities:  

Mesh:

Year:  2022        PMID: 35655960      PMCID: PMC9132712          DOI: 10.1155/2022/8551576

Source DB:  PubMed          Journal:  Glob Health Epidemiol Genom        ISSN: 2054-4200


  55 in total

1.  COVID-19 in Latin America: a first glance to the mortality.

Authors:  Nubia Muñoz
Journal:  Colomb Med (Cali)       Date:  2020-06-30

2.  Higher infectivity of the SARS-CoV-2 new variants is associated with K417N/T, E484K, and N501Y mutants: An insight from structural data.

Authors:  Abbas Khan; Tauqir Zia; Muhammad Suleman; Taimoor Khan; Syed Shujait Ali; Aamir Ali Abbasi; Anwar Mohammad; Dong-Qing Wei
Journal:  J Cell Physiol       Date:  2021-03-23       Impact factor: 6.513

Review 3.  Interactions of coronaviruses with ACE2, angiotensin II, and RAS inhibitors-lessons from available evidence and insights into COVID-19.

Authors:  Hisashi Kai; Mamiko Kai
Journal:  Hypertens Res       Date:  2020-04-27       Impact factor: 3.872

4.  Evaluating the Effects of SARS-CoV-2 Spike Mutation D614G on Transmissibility and Pathogenicity.

Authors:  Erik Volz; Verity Hill; John T McCrone; Anna Price; David Jorgensen; Áine O'Toole; Joel Southgate; Robert Johnson; Ben Jackson; Fabricia F Nascimento; Sara M Rey; Samuel M Nicholls; Rachel M Colquhoun; Ana da Silva Filipe; James Shepherd; David J Pascall; Rajiv Shah; Natasha Jesudason; Kathy Li; Ruth Jarrett; Nicole Pacchiarini; Matthew Bull; Lily Geidelberg; Igor Siveroni; Ian Goodfellow; Nicholas J Loman; Oliver G Pybus; David L Robertson; Emma C Thomson; Andrew Rambaut; Thomas R Connor
Journal:  Cell       Date:  2020-11-19       Impact factor: 41.582

5.  South Africa responds to new SARS-CoV-2 variant.

Authors:  Munyaradzi Makoni
Journal:  Lancet       Date:  2021-01-23       Impact factor: 79.321

6.  E484K as an innovative phylogenetic event for viral evolution: Genomic analysis of the E484K spike mutation in SARS-CoV-2 lineages from Brazil.

Authors:  Patrícia Aline Gröhs Ferrareze; Vinícius Bonetti Franceschi; Amanda de Menezes Mayer; Gabriel Dickin Caldana; Ricardo Ariel Zimerman; Claudia Elizabeth Thompson
Journal:  Infect Genet Evol       Date:  2021-05-25       Impact factor: 4.393

7.  SARS-Coronavirus Open Reading Frame-3a drives multimodal necrotic cell death.

Authors:  Yuan Yue; Neel R Nabar; Chong-Shan Shi; Olena Kamenyeva; Xun Xiao; Il-Young Hwang; Min Wang; John H Kehrl
Journal:  Cell Death Dis       Date:  2018-09-05       Impact factor: 8.469

8.  SARS-CoV-2 and COVID-19: The most important research questions.

Authors:  Kit-San Yuen; Zi-Wei Ye; Sin-Yee Fung; Chi-Ping Chan; Dong-Yan Jin
Journal:  Cell Biosci       Date:  2020-03-16       Impact factor: 7.133

Review 9.  Genetics and genomics of SARS-CoV-2: A review of the literature with the special focus on genetic diversity and SARS-CoV-2 genome detection.

Authors:  Azadeh Rahimi; Azin Mirzazadeh; Soheil Tavakolpour
Journal:  Genomics       Date:  2020-09-30       Impact factor: 5.736

Review 10.  Evolution patterns of SARS-CoV-2: Snapshot on its genome variants.

Authors:  Marta Giovanetti; Francesca Benedetti; Giovanni Campisi; Alessandra Ciccozzi; Silvia Fabris; Giancarlo Ceccarelli; Vittoradolfo Tambone; Arnaldo Caruso; Silvia Angeletti; Davide Zella; Massimo Ciccozzi
Journal:  Biochem Biophys Res Commun       Date:  2020-11-06       Impact factor: 3.575

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