Literature DB >> 35654896

The role of zinc in the adaptive evolution of polar phytoplankton.

Naihao Ye1,2, Wentao Han3, Andrew Toseland4, Yitao Wang3, Xiao Fan3, Dong Xu3, Cock van Oosterhout4, Igor V Grigoriev5,6, Alessandro Tagliabue7, Jian Zhang3, Yan Zhang3, Jian Ma3, Huan Qiu8, Youxun Li9, Xiaowen Zhang10,11, Thomas Mock12.   

Abstract

Zinc is an essential trace metal for oceanic primary producers with the highest concentrations in polar oceans. However, its role in the biological functioning and adaptive evolution of polar phytoplankton remains enigmatic. Here, we have applied a combination of evolutionary genomics, quantitative proteomics, co-expression analyses and cellular physiology to suggest that model polar phytoplankton species have a higher demand for zinc because of elevated cellular levels of zinc-binding proteins. We propose that adaptive expansion of regulatory zinc-finger protein families, co-expanded and co-expressed zinc-binding proteins families involved in photosynthesis and growth in these microalgal species and their natural communities were identified to be responsible for the higher zinc demand. The expression of their encoding genes in eukaryotic phytoplankton metatranscriptomes from pole-to-pole was identified to correlate not only with dissolved zinc concentrations in the upper ocean but also with temperature, suggesting that environmental conditions of polar oceans are responsible for an increased demand of zinc. These results suggest that zinc plays an important role in supporting photosynthetic growth in eukaryotic polar phytoplankton and that this has been critical for algal colonization of low-temperature polar oceans.
© 2022. The Author(s), under exclusive licence to Springer Nature Limited.

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Year:  2022        PMID: 35654896     DOI: 10.1038/s41559-022-01750-x

Source DB:  PubMed          Journal:  Nat Ecol Evol        ISSN: 2397-334X            Impact factor:   19.100


  38 in total

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Authors:  A D Anbar; A H Knoll
Journal:  Science       Date:  2002-08-16       Impact factor: 47.728

Review 2.  The biogeochemical cycles of trace metals in the oceans.

Authors:  F M M Morel; N M Price
Journal:  Science       Date:  2003-05-09       Impact factor: 47.728

3.  Structural classification of zinc fingers: survey and summary.

Authors:  S Sri Krishna; Indraneel Majumdar; Nick V Grishin
Journal:  Nucleic Acids Res       Date:  2003-01-15       Impact factor: 16.971

4.  Primary production of the biosphere: integrating terrestrial and oceanic components

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Journal:  Science       Date:  1998-07-10       Impact factor: 47.728

5.  Comparative and Functional Algal Genomics.

Authors:  Crysten E Blaby-Haas; Sabeeha S Merchant
Journal:  Annu Rev Plant Biol       Date:  2019-03-01       Impact factor: 26.379

6.  Biological uptake and reversible scavenging of zinc in the global ocean.

Authors:  Thomas Weber; Seth John; Alessandro Tagliabue; Tim DeVries
Journal:  Science       Date:  2018-07-06       Impact factor: 47.728

7.  Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus.

Authors:  Thomas Mock; Robert P Otillar; Jan Strauss; Mark McMullan; Pirita Paajanen; Jeremy Schmutz; Asaf Salamov; Remo Sanges; Andrew Toseland; Ben J Ward; Andrew E Allen; Christopher L Dupont; Stephan Frickenhaus; Florian Maumus; Alaguraj Veluchamy; Taoyang Wu; Kerrie W Barry; Angela Falciatore; Maria I Ferrante; Antonio E Fortunato; Gernot Glöckner; Ansgar Gruber; Rachel Hipkin; Michael G Janech; Peter G Kroth; Florian Leese; Erika A Lindquist; Barbara R Lyon; Joel Martin; Christoph Mayer; Micaela Parker; Hadi Quesneville; James A Raymond; Christiane Uhlig; Ruben E Valas; Klaus U Valentin; Alexandra Z Worden; E Virginia Armbrust; Matthew D Clark; Chris Bowler; Beverley R Green; Vincent Moulton; Cock van Oosterhout; Igor V Grigoriev
Journal:  Nature       Date:  2017-01-16       Impact factor: 49.962

8.  Adaptation to Extreme Antarctic Environments Revealed by the Genome of a Sea Ice Green Alga.

Authors:  Zhenhua Zhang; Changfeng Qu; Kaijian Zhang; Yingying He; Xing Zhao; Lingxiao Yang; Zhou Zheng; Xiaoya Ma; Xixi Wang; Wenyu Wang; Kai Wang; Dan Li; Liping Zhang; Xin Zhang; Danyan Su; Xin Chang; Mengyan Zhou; Dan Gao; Wenkai Jiang; Frederik Leliaert; Debashish Bhattacharya; Olivier De Clerck; Bojian Zhong; Jinlai Miao
Journal:  Curr Biol       Date:  2020-07-02       Impact factor: 10.834

Review 9.  The discovery of zinc fingers and their applications in gene regulation and genome manipulation.

Authors:  Aaron Klug
Journal:  Annu Rev Biochem       Date:  2010       Impact factor: 23.643

10.  Structure of the C3HC4 domain by 1H-nuclear magnetic resonance spectroscopy. A new structural class of zinc-finger.

Authors:  P N Barlow; B Luisi; A Milner; M Elliott; R Everett
Journal:  J Mol Biol       Date:  1994-03-25       Impact factor: 5.469

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  2 in total

1.  Polar algae flaunt their zinc assets.

Authors:  Crysten E Blaby-Haas
Journal:  Nat Ecol Evol       Date:  2022-07       Impact factor: 19.100

2.  Multiomics in the central Arctic Ocean for benchmarking biodiversity change.

Authors:  Thomas Mock; William Boulton; John-Paul Balmonte; Kevin Barry; Stefan Bertilsson; Jeff Bowman; Moritz Buck; Gunnar Bratbak; Emelia J Chamberlain; Michael Cunliffe; Jessie Creamean; Oliver Ebenhöh; Sarah Lena Eggers; Allison A Fong; Jessie Gardner; Rolf Gradinger; Mats A Granskog; Charlotte Havermans; Thomas Hill; Clara J M Hoppe; Kerstin Korte; Aud Larsen; Oliver Müller; Anja Nicolaus; Ellen Oldenburg; Ovidiu Popa; Swantje Rogge; Hendrik Schäfer; Katyanne Shoemaker; Pauline Snoeijs-Leijonmalm; Anders Torstensson; Klaus Valentin; Anna Vader; Kerrie Barry; I-M A Chen; Alicia Clum; Alex Copeland; Chris Daum; Emiley Eloe-Fadrosh; Brian Foster; Bryce Foster; Igor V Grigoriev; Marcel Huntemann; Natalia Ivanova; Alan Kuo; Nikos C Kyrpides; Supratim Mukherjee; Krishnaveni Palaniappan; T B K Reddy; Asaf Salamov; Simon Roux; Neha Varghese; Tanja Woyke; Dongying Wu; Richard M Leggett; Vincent Moulton; Katja Metfies
Journal:  PLoS Biol       Date:  2022-10-17       Impact factor: 9.593

  2 in total

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