Literature DB >> 35641770

Biparental Crossing and QTL Mapping for Validation of Genome-Wide Association Studies.

Pawan L Kulwal1, Ravinder Singh2.   

Abstract

Association mapping (AM), also known as genome-wide association studies (GWAS), is increasingly being employed in crop plants for the identification of QTL/genes and marker-trait associations (MTAs) in natural populations. Large numbers of such associations have been identified for variety of traits in different crop plants. However, not many of these associations have been used practically in the crop improvement program due to lack of validation. Although there are different ways through which the results of AM/GWAS could be validated, the best approach is to develop a biparental population for the trait of interest. An overview of the steps involved in the validation of results of AM using biparental mapping population in plants is provided in this chapter.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Association mapping; Biparental crossing; Crop plants; GWAS; Marker–trait association; QTL mapping; Validation

Mesh:

Year:  2022        PMID: 35641770     DOI: 10.1007/978-1-0716-2237-7_16

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  6 in total

Review 1.  Association mapping in plants in the post-GWAS genomics era.

Authors:  Pushpendra K Gupta; Pawan L Kulwal; Vandana Jaiswal
Journal:  Adv Genet       Date:  2019-01-22       Impact factor: 1.944

Review 2.  Trait Mapping Approaches Through Linkage Mapping in Plants.

Authors:  Pawan L Kulwal
Journal:  Adv Biochem Eng Biotechnol       Date:  2018       Impact factor: 2.635

3.  A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species.

Authors:  Robert J Elshire; Jeffrey C Glaubitz; Qi Sun; Jesse A Poland; Ken Kawamoto; Edward S Buckler; Sharon E Mitchell
Journal:  PLoS One       Date:  2011-05-04       Impact factor: 3.240

4.  Association mapping and validation of QTLs for flour yield in the soft winter wheat variety Kitahonami.

Authors:  Goro Ishikawa; Kazuhiro Nakamura; Hiroyuki Ito; Mika Saito; Mikako Sato; Hironobu Jinno; Yasuhiro Yoshimura; Tsutomu Nishimura; Hidekazu Maejima; Yasushi Uehara; Fuminori Kobayashi; Toshiki Nakamura
Journal:  PLoS One       Date:  2014-10-31       Impact factor: 3.240

Review 5.  Recommendations for Choosing the Genotyping Method and Best Practices for Quality Control in Crop Genome-Wide Association Studies.

Authors:  Stefano Pavan; Chiara Delvento; Luigi Ricciardi; Concetta Lotti; Elena Ciani; Nunzio D'Agostino
Journal:  Front Genet       Date:  2020-06-05       Impact factor: 4.599

6.  Genome-wide association analysis and QTL mapping reveal the genetic control of cadmium accumulation in maize leaf.

Authors:  Xiongwei Zhao; Longxin Luo; Yanhua Cao; Yajuan Liu; Yuhua Li; Wenmei Wu; Yuzhou Lan; Yiwei Jiang; Shibin Gao; Zhiming Zhang; Yaou Shen; Guangtang Pan; Haijian Lin
Journal:  BMC Genomics       Date:  2018-01-25       Impact factor: 3.969

  6 in total

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