| Literature DB >> 35630675 |
Charles Z Palmer1, Ryan C Fortenberry1, Joseph S Francisco2.
Abstract
For decades, sulfur has remained underdetected in molecular form within the dense interstellar medium (ISM), and somewhere a molecular sulfur sink exists where it may be hiding. With the discovery of hydrogen peroxide (HOOH) in the ISM in 2011, a natural starting point may be found in sulfur-bearing analogs that are chemically similar to HOOH: hydrogen thioperoxide (HOSH) and hydrogen persulfide (HSSH). The present theoretical study couples the accuracy in the anharmonic fundamental vibrational frequencies from the explicitly correlated coupled cluster theory with the accurate rotational constants provided by canonical high-level coupled cluster theory to produce rovibrational spectra for use in the potential observation of HOSH and HSSH. The ν6 mode for HSSH at 886.1 cm-1 is within 0.2 cm-1 of the gas-phase experiment, and the B0 rotational constant for HSSH of 6979.5 MHz is within 9.0 MHz of the experimental benchmarks, implying that the unknown spectral features (such as the first overtones and combination bands) provided herein are similarly accurate. Notably, a previous experimentally-attributed 2ν1 mode, at 7041.8 cm-1, has been reassigned to the ν1+ν5 combination band based on the present work's ν1+ν5 value at 7034.3 cm-1. The most intense vibrational transitions for each molecule are the torsions, with HOSH having a more intense transition of 72 km/mol compared to HSSH's intensity of 14 km/mol. Furthermore, HOSH has a larger net dipole moment of 1.60 D compared to HSSH's 1.15 D. While HOSH may be the more likely candidate of the two for possible astronomical observation via vibrational spectroscopy due to the notable difference in their intensities, both HSSH and HOSH have large enough net dipole moments to be detectable by rotational spectroscopy to discover the role these molecules may have as possible molecular sulfur sinks in the dense ISM.Entities:
Keywords: anharmonic frequencies; astrochemistry; computational spectroscopy; coupled cluster theory; quantum chemistry; rotational spectroscopy; vibrational spectroscopy
Mesh:
Substances:
Year: 2022 PMID: 35630675 PMCID: PMC9143799 DOI: 10.3390/molecules27103200
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.927
Figure 1Visual depiction of the optimized structures for (a) HOOH, (b) HOSH, (c) HSSH.
Geometrical parameters and spectroscopic constants for HOOH compared to the previous gas-phase experiment.
| Units | CcCR | F12-TZ | Prev. Theory | Prev. Expt. | |
|---|---|---|---|---|---|
| R | Å | 0.96198 | 0.96348 | 0.963 | 0.9617 |
| R | Å | 1.44803 | 1.45099 | 1.450 | 1.4524 |
|
| 100.15 | 100.09 | 100.1 | 99.76 | |
|
| 112.80 | 112.66 | 112.7 | 113.6 | |
|
| MHz | 304,899.4 | 303,773.7 | ||
|
| MHz | 26,576.3 | 26,472.3 | ||
|
| MHz | 25,742.3 | 25,646.3 | ||
| R | Å | 0.96228 | 0.96379 | 0.9675 | |
| R | Å | 1.46166 | 1.46464 | 1.461 | |
|
| 100.05 | 99.99 | 100.07 | ||
|
| MHz | 302,188.9 | 301,077.7 | 300,419 | 301,874.2654 |
|
| MHz | 26,276.2 | 26,171.3 | 26,030 | 26,194.08965 |
|
| MHz | 25,286.1 | 25,194.1 | 25,349 | 25,116.88435 |
|
| MHz | 297,349.8 | 296,967.2 | ||
|
| MHz | 26,232.4 | 26,128.6 | ||
|
| MHz | 25,282.6 | 25,191.3 | ||
|
| MHz | 305,755.8 | 304,615.1 | ||
|
| MHz | 26,093.7 | 25,988.4 | ||
|
| MHz | 25,214.1 | 25,121.0 | ||
|
| MHz | 301,557.4 | 300,454.1 | 301,873.4973264 | |
|
| MHz | 25,957.4 | 25,853.2 | 26,193.0529267 | |
|
| MHz | 24,962.0 | 24,871.3 | 25,117.8952429 | |
|
| MHz | 300,894.7 | 299,793.5 | ||
|
| MHz | 26,290.4 | 26,182.9 | ||
|
| MHz | 25,044.4 | 24,958.2 | ||
|
| MHz | 295,700.7 | 293,937.2 | ||
|
| MHz | 26,240.8 | 26,136.4 | ||
|
| MHz | 25,284.4 | 25,193.1 | ||
|
| MHz | 306,454.1 | 305,307.4 | 306,559.6731544 | |
|
| MHz | 26,215.6 | 26,110.0 | 26,162.8878096 | |
|
| MHz | 25,043.1 | 24,951.8 | 24,836.1562867 | |
|
| kHz | 96.817 | 96.409 | 86.6100411 | |
|
| MHz | 11.027 | 10.914 | 13.7784613 | |
|
| MHz | 1.138 | 1.130 | 1.2576293 | |
|
| Hz | −31.906 | −14.235 | ||
|
| MHz | 6.812 | 6.780 | ||
|
| mHz | 392.379 ( | 1.285 | ||
|
| kHz | 1.765 | 1.729 | ||
|
| Hz | 77.849 | 74.877 | ||
|
| Hz | −228.455 | −219.330 | ||
|
| 2.608 (mHz) | 887.135 | |||
|
| Hz | 111.163 | 111.449 | ||
|
| kHz | −53.653 | −55.097 | ||
|
| D | 1.75 | 1.746 |
Experimental ground state rotational constants from [51]. Previous theory computed at CCSD(T)-F12/ccpVTZ-F12 from [52]. Experimental geometrical parameters from [53]. Electric dipole moment calculated at the CCSD(T)/aug-cc-pVTZ level of theory from [54]. Experimental ν6 rotational constant for ν6 from [55]. Experimental rotational constants for ν6 from [56].
Vibrational frequencies (cm), and IR intensities (km/mol) given in parentheses for HOOH compared to the previous theory and gas-phase experiment.
| Mode | Desc. | CcCR | F12-TZ | Prev. Theory | Prev. Theory | Prev. Expt. |
|---|---|---|---|---|---|---|
| S | 3806.1 | 3798.5 | 3798 | |||
| S | 1441.7 | 1437.6 | 1447 | |||
| S | 915.0 | 911.3 | 911 | |||
| S | 380.3 | 380.4 | 378 | |||
| S | 3805.8 | 3798.4 | 3798 | |||
| S | 1333.3 | 1330.1 | 1330 | |||
| S | 3611.1 | 3607.5 (11) | 3607 | 3611.05 | 3609.8 | |
| S | 1398.0 | 1393.9 (1) | 1400 | 1394.43 | 1393.5 | |
| S | 878.4 | 875.3 (1) | 875 | 865.77 | 877.93 | |
| S | 314.7 | 319.4 (164) | 315 | 370.89 | ||
| S | 3608.8 | 3605.2 (49) | 3605 | 3609.73 | 3610.66 | |
| S | 1278.4 | 1275.9 (119) | 1283 | 1264.78 | 1273.68 | |
| ZPT | 5740.5 | 5730.6 |
Previous theoretical QFF computed at CCSD(T)-F12/cc-pVTZ-F12 level of theory from [52]. Previous theoretical values using VMP2 from [53]. Previous gas-phase experimental values gathered from [56], [57]. [58], and [59].
Figure 2Potential energy scan of the torsional motion. (A) HOOH calculated at the F12-TZ level of theory (blue) and a previous theoretical study using HF/STO (black), (B) HOSH calculated at the F12-TZ level of theory, (C) HSSH at the F12-TZ level of theory, (D) comparison of HOOH, HOSH, and HSSH.
Vibrational frequencies (cm) and IR intensities (km/mol) given in parentheses for two-quanta bands of HOOH compared to previous gas-phase experiment.
| Mode | CcCR | F12-TZ | Prev. Expt. | Prev. Theory |
|---|---|---|---|---|
|
| 7131.0 | 7125.6 (1) | 7041.8 | |
|
| 2772.9 | 2764.8 (1) | ||
|
| 1739.6 | 1734.0 (1) | ||
|
| 557.8 | 571.5 (1) | ||
|
| 7125.2 | 7119.8 (1) | ||
|
| 2534.8 | 2529.7 (1) | ||
| 4990.7 | 4983.1 (1) | |||
| 4487.3 | 4480.6 (1) | |||
| 3930.5 | 3931.4 (1) | |||
| 7037.8 | 7034.3 (5) | 7041.8 | ||
| 4879.9 | 4873.8 (1) | 4827.49 | ||
| 2258.6 | 2251.4 (1) | |||
| 1736.0 | 1736.2 (1) | |||
| 4989.4 | 4981.8 (1) | 4982.57 | ||
| 2663.8 | 2657.2 (5) | |||
| 1191.2 | 1193.0 (1) | |||
| 4484.9 | 4478.2 (1) | 4487.27 | ||
| 2141.1 | 2135.5 (1) | |||
| 3926.6 | 3927.4 (1) | |||
| 1576.0 | 1578.6 (1) | |||
| 4876.7 | 4870.7 (1) |
Previous theoretically-attributed overtone from [63]. Previous gas-phase experimentally-attributed overtone from [65]. Previous gas-phase experimentally-attributed two-quanta modes from [64]. Previous gas-phase experimentally-attributed combination band and computationally-attributed overtone from [66]. This attribution is questioned herein. See text for discussion.
Geometrical parameters and spectroscopic constants for HOSH compared to the previous theory and gas-phase experiment.
| Units | CcCRE | CcCR | F12-TZ | Prev. Theory | Prev. Expt. | |
|---|---|---|---|---|---|---|
| R | Å | 0.95700 | 0.96012 | 0.96152 | 0.9601 | 0.9606 |
| R | Å | 1.65350 | 1.66051 | 1.66370 | 1.6614 | 1.6616 |
| R | Å | 1.33758 | 1.34273 | 1.34423 | 1.3413 | 1.3420 |
|
| 107.53 | 107.21 | 107.20 | 107.0 | 107.19 | |
|
| 98.38 | 98.45 | 98.43 | 98.6 | 98.57 | |
|
| 91.58 | 91.31 | 91.42 | 91.3 | 90.41 | |
|
| MHz | 205,070.3 | 203,373.2 | 202,852.8 | 203,624 | |
|
| MHz | 15,546.3 | 15,420.7 | 15,362.9 | 15,406 | |
|
| MHz | 15,116.1 | 14,995.6 | 14,940.2 | 14,985 | |
| R | Å | 0.95493 | 0.95805 | 0.95947 | ||
| R | Å | 1.66203 | 1.66926 | 1.67248 | ||
| R | Å | 1.34726 | 1.35227 | 1.35379 | ||
|
| 107.80 | 107.51 | 107.49 | |||
|
| 98.44 | 98.50 | 98.49 | |||
|
| MHz | 203,686.6 | 202,021.5 | 201,494.3 | 202,199 | 202,069 |
|
| MHz | 15,428.1 | 15,299.9 | 15,242.2 | 15,285 | 15,282 |
|
| MHz | 14,983.2 | 14,860.4 | 14,805.3 | 14,847 | 14,840 |
|
| MHz | 201,230.6 | 199,597.1 | 199,079.8 | 199,769.9 | 199,532.6 |
|
| MHz | 15,403.5 | 15,275.4 | 15,217.9 | 15,255.6 | 15,260.0 |
|
| MHz | 14,971.9 | 14,849.0 | 14,794.0 | 14,829.6 | 14,833.2 |
|
| MHz | 199,585.2 | 197,980.8 | 197,464.1 | ||
|
| MHz | 15,447.6 | 15,318.6 | 15,260.6 | ||
|
| MHz | 14,982.9 | 14,859.6 | 14,804.2 | ||
|
| MHz | 206,750.4 | 205,046.1 | 204,484.5 | ||
|
| MHz | 15,386.9 | 15,257.9 | 15,200.6 | ||
|
| MHz | 14,986.0 | 14,861.5 | 14,806.5 | ||
|
| MHz | 206,017.2 | 204,343.0 | 203,808.7 | ||
|
| MHz | 15,414.9 | 15,286.0 | 15,228.1 | ||
|
| MHz | 14,920.8 | 14,797.9 | 14,742.9 | ||
|
| MHz | 203,499.1 | 201,823.1 | 201,296.5 | ||
|
| MHz | 15,299.2 | 15,168.7 | 15,111.4 | ||
|
| MHz | 14,855.8 | 14,730.7 | 14,675.9 | ||
|
| MHz | 202,269.5 | 200,635.4 | 200,115.3 | ||
|
| MHz | 15,384.1 | 15,255.2 | 15,197.5 | ||
|
| MHz | 14,912.1 | 14,789.6 | 14,734.6 | ||
|
| kHz | 23.614 | 23.535 | 23.346 | 24.528463 | |
|
| MHz | 5.604 | 5.495 | 5.473 | 5.989715 | |
|
| kHz | 388.724 | 385.632 | 382.477 | 0.3904340 (MHz) | |
|
| Hz | 682.725 | 678.344 | 671.200 | ||
|
| MHz | −0.811 | −0.823 | −0.816 | ||
|
| mHz | −12.453 | −14.415 | −14.509 | ||
|
| Hz | 448.475 | 433.966 | 429.934 | ||
|
| Hz | −8.868 | −9.067 | −8.931 | ||
|
| Hz | 58.332 | 58.290 | 57.557 | ||
|
| 484.538 | 407.691 | 394.947 | |||
|
| mHz | −862.352 | −710.680 | −699.524 | ||
|
| kHz | −7.755 | −7.988 | −7.893 | ||
|
| D | 1.41 | ||||
|
| D | 0.76 | ||||
|
| D | 0.05 | ||||
|
| D | 1.66 |
Previous gas-phase ground state rotational constants and centrifugal distortion constants from [67]. Previous theoretical geometrical parameters calculated at the CCSD(T,full)/cc-pwCVQZ level of theory, ground state rotational constants calculated at the CCSD(T, full)/cc-pwCVQZ level of theory with vibration rotation corrections from the CCSD(T)/cc-pV(T+d)Z level of theory, and theoretical dipole moment calculated at the CCSD(T, full)/cc-pwCVQZ level of theory from [68]. Previous empirical equilibrium geometrical parameters from [69]. Previous theoretical rotational constants at the CCSD(T)/cc-pVQZ level of theory with CCSD(T)/cc-pVTZ vibrational correction and experimental rotational constants from [70].
Vibrational frequencies (cm), and IR intensities (km/mol) given in parentheses for HOSH compared to previous theory and gas-phase experiments.
| Mode | Desc. | CcCRE | CcCR | F12-TZ | Prev. Theory | Prev. Gas-Phase | Prev. Ar Matrix |
|---|---|---|---|---|---|---|---|
|
| S | 3854.6 | 3825.8 | 3819.6 | 3829 (69) | ||
|
| S | 2672.4 | 2662.2 | 2656.1 | 2649 (16) | ||
|
| S | 1210.4 | 1210.9 | 1211.0 | 1228 (41) | ||
|
| S | 1043.8 | 1033.7 | 1032.8 | 1029 (2) | ||
|
| S | 794.1 | 786.0 | 784.7 | 777 (52) | ||
|
| S | 487.1 | 479.8 | 479.6 | 490 (75) | ||
|
| S | 3650.8 | 3628.9 | 3626.7 (67) | 3646.5 | 3625.6 | 3608.3 |
|
| S | 2556.8 | 2547.0 | 2544.9 (8) | 2533.3 | 2538 | 2550.1 |
|
| S | 1173.5 | 1174.8 | 1176.7 (36) | 1183.5 | 1175.7 | |
|
| S | 1018.8 | 1009.3 | 1008.3 (2) | 1006.6 | ||
|
| S | 772.2 | 763.7 | 763.4 (47) | 764.4 | 762.5 | |
|
| S | 441.9 | 438.0 | 447.4 (72) | 448.1 | 445.3 | |
| ZPT | 4951.8 | 4922.8 | 4920.2 |
Previous computed harmonic frequencies conducted at the CCSD(T)/cc-pV(T+d)Z level of theory from [68]. Previous theory, conducted at the CCSD(T)/cc-pVTZ level of theory, gas-phase experiment, and Ar Matrix data from [73].
Figure 3Simulated IR spectrum (black) of the S–H stretch for HOSH with the gas-phase IR spectrum from [73] (red) of the same mode containing the contamination from the () combination bands.
Vibrational frequencies (cm), and IR intensities (km/mol) given in parentheses for two-quanta bands of HOSH compared to the previous gas-phase experiment.
| Mode | CcCR | F12-TZ | Prev. Theory |
|---|---|---|---|
|
| 7075.6 | 7074.7 (5) | |
|
| 4986.7 | 4985.7 (1) | |
|
| 2330.8 | 2334.7 (4) | |
|
| 2010.7 | 2008.8 (1) | |
|
| 1524.8 | 1522.5 (1) | |
|
| 839.1 | 864.0 (3) | 846.269 |
| 6174.8 | 6170.5 (1) | ||
| 4781.8 | 4782.1 (1) | ||
| 4637.1 | 4633.8 (1) | ||
| 4394.2 | 4390.7 (1) | ||
| 4063.4 | 4071.3 (1) | ||
| 3721.6 | 3721.4 (1) | ||
| 3537.0 | 3533.9 (1) | ||
| 3315.6 | 3312.2 (1) | ||
| 2988.3 | 2997.4 (1) | ||
| 2178.7 | 2179.4 (1) | ||
| 1935.8 | 1936.2 (1) | ||
| 1612.0 | 1626.5 (1) | ||
| 1768.6 | 1766.2 (1) | ||
| 1448.0 | 1456.5 (1) | ||
| 1202.3 | 1209.7 (1) |
Previous theoretically-attributed overtone at the CCSD(T)/aug-cc-pV(Q+d)Z level of theory from [74].
Geometrical parameters and spectroscopic constants for HSSH compared to the previous gas-phase experiment.
| Units | CcCR | F12-TZ | Prev. Theory | Prev. Expt. | |
|---|---|---|---|---|---|
| r | Å | 1.34066 | 1.34213 | 1.3395 | 1.3421 |
| r | Å | 2.05016 | 2.05579 | 2.0503 | 2.0564 |
|
| 98.19 | 98.17 | 98.18 | 97.88 | |
|
| 90.63 | 90.59 | 90.64 | 90.34 | |
|
| MHz | 147,873.5 | 147,533.6 | ||
|
| MHz | 7023.8 | 6986.4 | ||
|
| MHz | 7022.3 | 6984.9 | ||
| r | Å | 1.34588 | 1.34733 | 1.34 | 1.327 |
| r | Å | 2.05883 | 2.06453 | 2.082 | 2.055 |
|
| 98.23 | 98.21 | 97.8 | 91.33 | |
|
| MHz | 146,754.2 | 146,415.8 | 146,858.1473 | |
|
| MHz | 7010.6 | 6979.5 | 6970.42953 | |
|
| MHz | 6938.1 | 6894.1 | 6967.68832 | |
|
| MHz | 144,632.3 | 144,299.4 | ||
|
| MHz | 7016.9 | 6985.7 | ||
|
| MHz | 6945.2 | 6901.1 | ||
|
| MHz | 149,577.8 | 156,292.4 | ||
|
| MHz | 7001.9 | 7029.5 | ||
|
| MHz | 6924.8 | 6880.8 | ||
|
| MHz | 146,685.6 | 146,348.2 | 146,799.077 | |
|
| MHz | 6969.5 | 6938.4 | 6928.53044 | |
|
| MHz | 6898.1 | 6854.0 | 6926.67937 | |
|
| MHz | 145,893.9 | 145,559.8 | ||
|
| MHz | 6982.3 | 6951.3 | ||
|
| MHz | 6903.0 | 6859.0 | ||
|
| MHz | 144,698.0 | 144,365.9 | 144,702.2 | |
|
| MHz | 7016.2 | 6985.0 | 6977.638 | |
|
| MHz | 6944.5 | 6900.5 | 6975.508 | |
|
| MHz | 146,799.1 | 139,393.7 | ||
|
| MHz | 6980.1 | 6890.5 | ||
|
| MHz | 6914.5 | 6870.6 | ||
|
| kHz | 5.342 | 5.295 | 5.39849 | |
|
| MHz | 2.268 | 2.261 | 2.42355 | |
|
| kHz | 85.417 | 84.400 | 85.5254 | |
|
| Hz | −8.572 | −8.395 | ||
|
| MHz | 17.569 | 20.809 | ||
|
| mHz | −1.211 | −1.270 | ||
|
| Hz | 103.985 | 106.134 | ||
|
| Hz | 5.649 | 6.891 | ||
|
| Hz | −15.461 | −19.644 | ||
|
| 6.012 | 5.185 | |||
|
| Hz | 449.754 | 638.243 | ||
|
| D | 1.15 | 1.30 |
Previous gas-phase ground state rotational constants from [78]. Previous theoretical geometry and dipole moment at the CCSD(T)/cc-pVTZ level of theory from [79]. Previous experimental structural data from [80]. Previous experimental centrifugal distortion constants from [81]. Previous theoretical geometrical parameters at the HF/VnZ(Q,5,6) + fc-CCSD(T)/VnZ(q,5) + CV/CCSD(T)/CVQZ level of theory with full-T,Q corrections and DPT2 corrections from [82]. Previous experimental rotational constants from [83]. Previous experimental rotational constants from [84].
Vibrational frequencies (cm), and IR intensities (km/mol) given in parentheses for HSSH compared to the previous gas-phase experiment.
| Mode | Desc. | CcCR | F12-TZ | Prev. Expt. |
|---|---|---|---|---|
| S | 2680.6 | 2674.8 | ||
| S | 908.1 | 907.9 | ||
| S | 529.9 | 528.0 | ||
| S | 443.7 | 441.1 | ||
| S | 2683.1 | 2677.2 | ||
| S | 907.3 | 907.7 | ||
| S | 2566.3 | 2563.5 (1) | 2555.78 | |
| S | 887.2 | 889.7 (1) | 883 | |
| S | 518.2 | 516.8 (1) | 515.92230 | |
| S | 405.8 | 417.6 (14) | 416 | |
| S | 2569.7 | 2566.2 (1) | 2558.64 | |
| S | 884.1 | 886.1 (2) | 886 | |
| ZPT | 4020.2 | 4018.1 |
Previous gas-phase experimental values from [83]. Previous gas-phase experimental values from [85].
Vibrational frequencies (cm), and IR intensities (km/mol) given in parentheses for two-quanta bands of HSSH compared to the previous gas-phase experiment.
| Mode | CcCR | F12-TZ | Prev. Expt. |
|---|---|---|---|
|
| 5085.8 | 5080.2 (1) | |
|
| 1762.5 | 1766.1 (1) | |
|
| 1031.8 | 1029.2 (1) | |
|
| 776.8 | 811.8 (1) | 808.0 |
|
| 5078.4 | 5074.3 (1) | |
|
| 1760.7 | 1765.1 (1) | |
| 3447.1 | 3445.2 (1) | ||
| 3087.9 | 3082.9 (1) | ||
| 2977.8 | 2985.0 (1) | ||
| 5028.9 | 5025.5 (1) | ||
| 3447.0 | 3445.9 (1) | ||
| 1398.6 | 1399.0 (1) | ||
| 1290.7 | 1306.7 (1) | ||
| 3443.0 | 3442.4 (1) | ||
| 1763.5 | 1767.2 (1) | ||
| 919.1 | 930.3 (1) | ||
| 3084.3 | 3080.1 (1) | ||
| 1398.0 | 1398.6 (1) | ||
| 2973.8 | 2982.5 (1) | ||
| 1281.3 | 1298.1 (1) | ||
| 3444.2 | 3443.4 (1) |
Previous gas-phase experimentally-attributed overtone from [78].