Literature DB >> 35626517

Grand Canonical Ensembles of Sparse Networks and Bayesian Inference.

Ginestra Bianconi1,2.   

Abstract

Maximum entropy network ensembles have been very successful in modelling sparse network topologies and in solving challenging inference problems. However the sparse maximum entropy network models proposed so far have fixed number of nodes and are typically not exchangeable. Here we consider hierarchical models for exchangeable networks in the sparse limit, i.e., with the total number of links scaling linearly with the total number of nodes. The approach is grand canonical, i.e., the number of nodes of the network is not fixed a priori: it is finite but can be arbitrarily large. In this way the grand canonical network ensembles circumvent the difficulties in treating infinite sparse exchangeable networks which according to the Aldous-Hoover theorem must vanish. The approach can treat networks with given degree distribution or networks with given distribution of latent variables. When only a subgraph induced by a subset of nodes is known, this model allows a Bayesian estimation of the network size and the degree sequence (or the sequence of latent variables) of the entire network which can be used for network reconstruction.

Entities:  

Keywords:  Bayesian inference; hierarchical models; network ensembles

Year:  2022        PMID: 35626517      PMCID: PMC9146839          DOI: 10.3390/e24050633

Source DB:  PubMed          Journal:  Entropy (Basel)        ISSN: 1099-4300            Impact factor:   2.738


  21 in total

1.  The average distances in random graphs with given expected degrees.

Authors:  Fan Chung; Linyuan Lu
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-04       Impact factor: 11.205

2.  Entropy of network ensembles.

Authors:  Ginestra Bianconi
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-03-27

3.  Entropies of complex networks with hierarchically constrained topologies.

Authors:  Ginestra Bianconi; Anthony C C Coolen; Conrad J Perez Vicente
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2008-07-28

4.  Entropy measures for networks: toward an information theory of complex topologies.

Authors:  Kartik Anand; Ginestra Bianconi
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-10-13

5.  Statistical physics of complex information dynamics.

Authors:  Arsham Ghavasieh; Carlo Nicolini; Manlio De Domenico
Journal:  Phys Rev E       Date:  2020-11       Impact factor: 2.529

6.  Generalized network structures: The configuration model and the canonical ensemble of simplicial complexes.

Authors:  Owen T Courtney; Ginestra Bianconi
Journal:  Phys Rev E       Date:  2016-06-16       Impact factor: 2.529

7.  Sparse graphs using exchangeable random measures.

Authors:  François Caron; Emily B Fox
Journal:  J R Stat Soc Series B Stat Methodol       Date:  2017-09-23       Impact factor: 4.488

8.  Statistical physics of exchangeable sparse simple networks, multiplex networks, and simplicial complexes.

Authors:  Ginestra Bianconi
Journal:  Phys Rev E       Date:  2022-03       Impact factor: 2.529

9.  Efficient and exact sampling of simple graphs with given arbitrary degree sequence.

Authors:  Charo I Del Genio; Hyunju Kim; Zoltán Toroczkai; Kevin E Bassler
Journal:  PLoS One       Date:  2010-04-08       Impact factor: 3.240

10.  Quantifying randomness in real networks.

Authors:  Chiara Orsini; Marija M Dankulov; Pol Colomer-de-Simón; Almerima Jamakovic; Priya Mahadevan; Amin Vahdat; Kevin E Bassler; Zoltán Toroczkai; Marián Boguñá; Guido Caldarelli; Santo Fortunato; Dmitri Krioukov
Journal:  Nat Commun       Date:  2015-10-20       Impact factor: 14.919

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