| Literature DB >> 35625488 |
Hsiao-Chen Lee1,2, Chao-Yuan Chang1,3, Yung-Chi Huang1, Kuan-Li Wu1,4, Hung-Hsing Chiang5, Yung-Yun Chang4,6, Lian-Xiu Liu1, Jen-Yu Hung1,4,7, Ya-Ling Hsu1,8,9, Yu-Yuan Wu10, Ying-Ming Tsai1,4,9,10.
Abstract
Lung adenocarcinoma (LUAD) still holds the most dreadful clinical outcomes worldwide. Despite advanced treatment strategies, there are still some unmet needs. Next-generation sequencing of large-scale cancer genomics discovery projects combined with bioinformatics provides the opportunity to take a step forward in meeting clinical conditions. Based on in-house and The Cancer Genome Atlas (TCGA) cohorts, the results showed decreased levels of ADAMTS1 conferred poor survival compared with normal parts. Gene set enrichment analyses (GSEA) indicated the negative correlation between ADAMTS1 and the potential roles of epithelial-mesenchymal transition (EMT), metastasis, and poor prognosis in LUAD patients. With the knockdown of ADAMTS1, A549 lung cancer cells exhibited more aggressive behaviors such as EMT and increased migration, resulting in cancer metastasis in a mouse model. The pathway interaction network disclosed the linkage of downregulated α2-macroglobulin (A2M), which regulates EMT and metastasis. Furthermore, immune components analysis indicated a positive relationship between ADAMTS1 and the infiltrating levels of multiple immune cells, especially anticancer CD4+ T cells in LUAD. Notably, ADAMTS1 expression was also inversely correlated with the accumulation of immunosuppressive myeloid-derived suppressor cells and regulatory T cells, implying the downregulated ADAMTS1 mediated immune adjustment to fit the tumor survival disadvantages in LUAD patients. In conclusion, our study indicates that ADAMTS1 interacts with A2M in regulating EMT and metastasis in LUAD. Additionally, ADAMTS1 contributes to poor prognosis and immune infiltration in LUAD patients.Entities:
Keywords: A2M; ADAMTS1; EMT; LUAD; immunity; metastasis
Year: 2022 PMID: 35625488 PMCID: PMC9139094 DOI: 10.3390/biology11050760
Source DB: PubMed Journal: Biology (Basel) ISSN: 2079-7737
Figure 1The expression of (LUAD). (A) Fold change of ADAMTS1 expression from the lung cancer cells H2087 cultured in normoxia and hypoxia conditions for 24 h (short) or 100 days (long). The RNA levels of ADAMTS1 were determined by qRT−PCR. (B) Fold change of ADAMTS1 expression in the paired tumor and normal tissue from eight patients with LUAD (in−house cohort). ADAMTS1 mRNA (C) and protein (D) expression in the normal tissue and tumor from TCGA cohort. (E) ADAMTS1 mRNA expression in the normal tissue and tumor of eight datasets from the Oncomine datasets. Data shown represent the mean ± SD (* p < 0.05, *** p < 0.001).
Figure 2Tumor characteristics and survival analysis of The mRNA expression of ADAMTS1 among the tumor nodal metastasis (A) and stages (B) in the TCGA cohort. The protein expression among the tumor stages (C) and grade (D) in the CPTAC cohort. Overall survival (OS) (E), time to first progression (FP) (F), and post-progression survival (PPS) (G) with ADAMTS1 expression level were analyzed using Kaplan–Meier methods in the public microarray and TCGA dataset. (*** p < 0.005).
Figure 3Interaction network of (A) Interaction network of ADAMTS1 with 25 other genes analyzed by Pathway Commons. (B) Correlation between ADAMTS1 and these genes in the in-house LUAD patients (C) and in the TCGA cohort (D). (E) Weight analysis of ADAMTS1 and A2M on overall survival (OS) of patients with LUAD. (F) The gene set variation analysis (GSVA) analysis of ADAMTS1 and A2M in TCGA datasets.
Figure 4Tumor characteristics of A2M expression and survival analysis of ADAMTS1-A2M expression in LUAD. (A) The expression of A2M mRNA among the normal tissue and tumor (left), the tumor stages (middle), and the nodal metastasis (right) in the TCGA cohort. (B) The expression of A2M protein expression among the normal tissue and tumor (left), the tumor stages (middle), and the tumor grades (right) in the CPTAC cohort. (C) The level of A2M in the tumor and normal tissue from eight patients with LUAD (in-house cohort). Correlation of OS (D), FP (E), and PPS (F) with A2M expression in patients with LUAD. (NS not significant, ** p < 0.01, *** p < 0.005).
Figure 5Functional states associated with (A) Functional analyses of cancer metastasis and poor survival via gene set enrichment analysis (GSEA) in TCGA LUAD patients with high or low ADAMTS1 levels (p < 0.05). (B) Functional analyses of cancer metastasis and poor survival via GSEA analysis in TCGA LUAD patients with high or low A2M levels (p < 0.05). (C) The analysis of functional states of ADAMTS1 using CancerSEA. (p < 0.05). (D) The analysis of functional states of A2M using CancerSEA (p < 0.05). NES, normalized enrichment score. ** p < 0.01, *** p < 0.001.
Figure 6Correlation of immune or stroma score with Positive (A) and negative (B) correlation of immune cell population with ADAMTS1. (C) The immune cells population of the LUAD patients from our 8 in−house LUAD patients. (D) The correlation of the immune population with the level of ADAMTS1 in 8 in−house LUAD patients.
Figure 7Functional analysis of ADAMTS1 in lung adenocarcinoma. (A) The knockdown efficacy of shRNA transfection. (B) Cell migration of ADAMTS1 knockdown A549 cells, as determined by wound-healing. (C) EMT markers in the ADAMTS1 knockdown A549 cells. The uncropped western blot figures were presented in Figure S1. (D) Tumor metastasis in mice lung after injection of control plasmid transfected and ADAMTS1-knockdown A549 cells. A549 cells were transfected with a control vector or ADAMTS1 shRNA plasmid and selected by puromycin. The cells were implanted into nude mice by tail vein injection, and the tumor nodules were counted after 21 days of inoculation. The data showed represent the mean ± SD (* p < 0.05, ** p < 0.01, **** p < 0.001). ns, not significant.
Multiple linear regression analysis of ADAMTS1 in TCGA-LUAD.
| Factors | Coefficient | Standard Error | 95% Confidential Interval | |
|---|---|---|---|---|
|
| 0.713 | 0.044 | *** | 0.626 to 0.8 |
|
| 0.096 | 0.025 | *** | 0.047 to 0.145 |
|
| −0.040 | 0.023 | 0.076 | −0.084 to 0.004 |
|
| 0.227 | 0.151 | 0.134 | −0.07 to 0.524 |
|
| −0.139 | 0.056 | * | −0.249 to −0.028 |
|
| −0.111 | 0.022 | *** | −0.154 to −0.068 |
|
| −0.026 | 0.035 | 0.458 | −0.094 to 0.042 |
|
| −0.082 | 0.046 | 0.076 | −0.172 to 0.008 |
|
| −0.051 | 0.017 | ** | −0.084 to −0.018 |
* p < 0.05, ** p < 0.01, *** p < 0.001.