Literature DB >> 35624351

Changes in the Expression of miRNA Isoforms and Their Targets in HT-29 Cells after Hypoxic Exposure.

M P Raigorodskaya1, A P Zhiyanov2, D A Averinskaya1, E A Tonevitsky1.   

Abstract

Tumor hypoxia is one of the main causes of progression and metastasis of colorectal cancer. Changes in the expression of miRNA responsible for post-translation regulation of gene expression is an important molecular mechanism of cell response to hypoxia. We performed sequencing of miRNA and mRNA of human colorectal adenocarcinoma HT-29 cells treated with two chemical agents mimicking hypoxia: cobalt (II) chloride and oxyquinoline. Bioinformatics analysis revealed differentially expressed miRNA isoforms (hsa-miR-210-3p|0, hsa-miR- 22-3p|0, hsa-let-7a-3p|0, hsa-miR-615-3p|0, and hsa-miR-4521|0) and their targets that changed their expression in both models of hypoxia. Thus, we identified new regulatory mechanisms of cell response to hypoxia.
© 2022. Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  HT-29; hypoxia; miRNA isoforms

Mesh:

Substances:

Year:  2022        PMID: 35624351     DOI: 10.1007/s10517-022-05506-2

Source DB:  PubMed          Journal:  Bull Exp Biol Med        ISSN: 0007-4888            Impact factor:   0.804


  22 in total

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Review 4.  Hypoxia and cancer.

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Journal:  J Mol Med (Berl)       Date:  2007-11-20       Impact factor: 4.599

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Journal:  Sci Rep       Date:  2018-02-05       Impact factor: 4.379

9.  MiR-210-3p protects endometriotic cells from oxidative stress-induced cell cycle arrest by targeting BARD1.

Authors:  Yongdong Dai; Xiang Lin; Wenzhi Xu; Xiaona Lin; Qianmeng Huang; Libing Shi; Yibin Pan; Yinli Zhang; Yunshan Zhu; Chao Li; Lulu Liu; Songying Zhang
Journal:  Cell Death Dis       Date:  2019-02-13       Impact factor: 8.469

10.  miRDB: an online database for prediction of functional microRNA targets.

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Journal:  Nucleic Acids Res       Date:  2020-01-08       Impact factor: 16.971

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