Literature DB >> 35622323

cfDNA-Based NGS IG Analysis in Lymphoma.

Christiane Pott1, Michaela Kotrova2, Nikos Darzentas2, Monika Brüggemann2, Mouhamad Khouja2.   

Abstract

Liquid biopsy is a novel diagnostic approach at first developed to characterize the molecular profile of solid tumors by analyzing body fluids. For cancer patients, it represents a noninvasive way to monitor the status of the solid tumor with respect to representative biomarkers. There is growing interest in the utilization of circulating tumor DNA (ctDNA) analysis also in the diagnostic and prognostic fields of lymphomas. Clonal immunoglobulin (IG) gene rearrangements are fingerprints of the respective lymphoid malignancy and thus are highly suited as specific molecular targets for minimal residual disease (MRD) detection. Tracing of the clonal IG rearrangement patterns in ctDNA pool during treatment can be used for MRD assessment in B-cell lymphomas. Here, we describe a reproducible next-generation sequencing assay to identify and characterize clonal IG gene rearrangements for MRD detection in cell-free DNA.
© 2022. The Author(s).

Entities:  

Keywords:  Cell-free DNA; Digital droplet PCR; Immunoglobulin rearrangements; Liquid biopsy; Minimal residual disease; Next-generation sequencing; Plasma; Therapy monitoring

Mesh:

Substances:

Year:  2022        PMID: 35622323     DOI: 10.1007/978-1-0716-2115-8_7

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  2 in total

1.  ARResT/Interrogate: an interactive immunoprofiler for IG/TR NGS data.

Authors:  Vojtech Bystry; Tomas Reigl; Adam Krejci; Martin Demko; Barbora Hanakova; Andrea Grioni; Henrik Knecht; Max Schlitt; Peter Dreger; Leopold Sellner; Dietrich Herrmann; Marine Pingeon; Myriam Boudjoghra; Jos Rijntjes; Christiane Pott; Anton W Langerak; Patricia J T A Groenen; Frederic Davi; Monika Brüggemann; Nikos Darzentas
Journal:  Bioinformatics       Date:  2017-02-01       Impact factor: 6.937

2.  Free DNA in the serum of cancer patients and the effect of therapy.

Authors:  S A Leon; B Shapiro; D M Sklaroff; M J Yaros
Journal:  Cancer Res       Date:  1977-03       Impact factor: 12.701

  2 in total

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