Literature DB >> 35614376

Description of Corynebacterium poyangense sp. nov., isolated from the feces of the greater white-fronted geese (Anser albifrons).

Qian Liu1, Guoying Fan2, Kui Wu2, Xiangning Bai1, Xi Yang1, Wentao Song2, Shengen Chen2, Yanwen Xiong3, Haiying Chen4.   

Abstract

Two novel Gram-positive, non-spore-forming, facultatively anaerobic, non-motile, and short rods to coccoid strains were isolated from the feces of the greater white-fronted geese (Anser albifrons) at Poyang Lake. The 16S rRNA gene sequences of strains 4H37-19T and 3HC-13 shared highest identity to that of Corynebacterium uropygiale Iso10T (97.8%). Phylogenetic and phylogenomic analyses indicated that strains 4H37-19T and 3HC-13 formed an independent clade within genus Corynebacterium and clustered with Corynebacterium uropygiale Iso10T. The average nucleotide identity and digital DNA-DNA hybridization value between strains 4H37-19T and 3HC-13 and members within genus Corynebacterium were all below 95% and 70%, respectively. The genomic G + C content of strains 4H37-19T and 3HC-13 was 52.5%. Diphosphatidylglycerol (DPG), phosphatidylglycerol (PG), phosphatidylinositol (PI), phosphatidylcholine, and phosphatidyl inositol mannosides (PIM) were the major polar lipids, with C18:1ω9c, C16:0, and C18:0 as the major fatty acids, and MK-8 (H4), MK-8(H2), and MK-9(H2) as the predominant respiratory quinones. The major whole cell sugar was arabinose, and the cell wall included mycolic acids. The cell wall peptidoglycan contained meso-diaminopimelic acid (meso-DAP). The polyphasic taxonomic data shows that these two strains represent a novel species of the genus Corynebacterium, for which the name Corynebacterium poyangense sp. nov. is proposed. The type strain of Corynebacterium poyangense is 4H37-19T (=GDMCC 1.1738T = KACC 21671T).
© 2022. Author(s).

Entities:  

Keywords:  Corynebacterium poyangense sp. nov.; Poyang Lake; feces; greater white-fronted geese; migratory bird

Mesh:

Substances:

Year:  2022        PMID: 35614376      PMCID: PMC9132169          DOI: 10.1007/s12275-022-2089-9

Source DB:  PubMed          Journal:  J Microbiol        ISSN: 1225-8873            Impact factor:   2.902


Appendix
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Journal:  J Gen Microbiol       Date:  1977-06

2.  RefSeq: expanding the Prokaryotic Genome Annotation Pipeline reach with protein family model curation.

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Journal:  Nucleic Acids Res       Date:  2020-12-03       Impact factor: 16.971

3.  Genomic analysis of a novel picornavirus from a migratory waterfowl, greater white-fronted goose (Anser albifrons).

Authors:  Ákos Boros; Péter Pankovics; Peter Simmonds; Tamás Kiss; Tung Gia Phan; Eric Delwart; Gábor Reuter
Journal:  Arch Virol       Date:  2017-12-29       Impact factor: 2.574

Review 4.  Diphtheria.

Authors:  Naresh Chand Sharma; Androulla Efstratiou; Igor Mokrousov; Ankur Mutreja; Bhabatosh Das; Thandavarayan Ramamurthy
Journal:  Nat Rev Dis Primers       Date:  2019-12-05       Impact factor: 52.329

5.  A large-scale evaluation of algorithms to calculate average nucleotide identity.

Authors:  Seok-Hwan Yoon; Sung-Min Ha; Jeongmin Lim; Soonjae Kwon; Jongsik Chun
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6.  Prevalence of Antimicrobial-Resistant Escherichia coli in Migratory Greater White-Fronted Geese (Anser albifrons) and their Habitat in Miyajimanuma, Japan.

Authors:  Akira Fukuda; Masaru Usui; Katsumi Ushiyama; Dipti Shrestha; Nagisa Hashimoto; Masayuki K Sakata; Toshifumi Minamoto; Osamu Yoshida; Kanako Murakami; Yutaka Tamura; Tetsuo Asai
Journal:  J Wildl Dis       Date:  2021-10-01       Impact factor: 1.535

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8.  Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.

Authors:  Ryan R Wick; Louise M Judd; Claire L Gorrie; Kathryn E Holt
Journal:  PLoS Comput Biol       Date:  2017-06-08       Impact factor: 4.475

9.  Significant Differences in Bacterial and Potentially Pathogenic Communities Between Sympatric Hooded Crane and Greater White-Fronted Goose.

Authors:  Xingjia Xiang; Fengling Zhang; Rong Fu; Shaofei Yan; Lizhi Zhou
Journal:  Front Microbiol       Date:  2019-02-05       Impact factor: 5.640

10.  List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ.

Authors:  Aidan C Parte; Joaquim Sardà Carbasse; Jan P Meier-Kolthoff; Lorenz C Reimer; Markus Göker
Journal:  Int J Syst Evol Microbiol       Date:  2020-07-23       Impact factor: 2.747

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