Literature DB >> 35610426

Circadian Control of Transcriptional and Metabolic Rhythms in Primary Hepatocytes.

Sung Kook Chun1, Selma Masri2.   

Abstract

Isolation of primary hepatocytes and culturing these cells ex vivo provides a powerful platform to model liver physiology in vivo. Primary hepatocytes can be cultured for several days, the circadian clock can be synchronized, and these primary cells can be utilized for functional gene regulation analysis and metabolic studies. In this chapter, we describe detailed methodology for isolation of viable primary hepatocytes, techniques for culturing these cells, methods for synchronization of the circadian clock, transfection and luciferase reporter analysis, as well as glucose production assays as a functional readout of metabolic state.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Clock-controlled gene expression; Glucose production assays; Luciferase reporter assays; Primary hepatocyte cell culture; Primary hepatocyte isolation; Synchronization of the circadian clock

Mesh:

Substances:

Year:  2022        PMID: 35610426      PMCID: PMC9435321          DOI: 10.1007/978-1-0716-2249-0_11

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  22 in total

1.  Restricted feeding uncouples circadian oscillators in peripheral tissues from the central pacemaker in the suprachiasmatic nucleus.

Authors:  F Damiola; N Le Minh; N Preitner; B Kornmann; F Fleury-Olela; U Schibler
Journal:  Genes Dev       Date:  2000-12-01       Impact factor: 11.361

2.  Distinct Circadian Signatures in Liver and Gut Clocks Revealed by Ketogenic Diet.

Authors:  Paola Tognini; Mari Murakami; Yu Liu; Kristin L Eckel-Mahan; John C Newman; Eric Verdin; Pierre Baldi; Paolo Sassone-Corsi
Journal:  Cell Metab       Date:  2017-09-05       Impact factor: 27.287

3.  Time-restricted feeding without reducing caloric intake prevents metabolic diseases in mice fed a high-fat diet.

Authors:  Megumi Hatori; Christopher Vollmers; Amir Zarrinpar; Luciano DiTacchio; Eric A Bushong; Shubhroz Gill; Mathias Leblanc; Amandine Chaix; Matthew Joens; James A J Fitzpatrick; Mark H Ellisman; Satchidananda Panda
Journal:  Cell Metab       Date:  2012-05-17       Impact factor: 27.287

4.  Clock Regulation of Metabolites Reveals Coupling between Transcription and Metabolism.

Authors:  Saikumari Y Krishnaiah; Gang Wu; Brian J Altman; Jacqueline Growe; Seth D Rhoades; Faith Coldren; Anand Venkataraman; Anthony O Olarerin-George; Lauren J Francey; Sarmistha Mukherjee; Saiveda Girish; Christopher P Selby; Sibel Cal; Ubeydullah Er; Bahareh Sianati; Arjun Sengupta; Ron C Anafi; I Halil Kavakli; Aziz Sancar; Joseph A Baur; Chi V Dang; John B Hogenesch; Aalim M Weljie
Journal:  Cell Metab       Date:  2017-04-04       Impact factor: 27.287

5.  Time of feeding and the intrinsic circadian clock drive rhythms in hepatic gene expression.

Authors:  Christopher Vollmers; Shubhroz Gill; Luciano DiTacchio; Sandhya R Pulivarthy; Hiep D Le; Satchidananda Panda
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-25       Impact factor: 11.205

6.  Reprogramming of the circadian clock by nutritional challenge.

Authors:  Kristin L Eckel-Mahan; Vishal R Patel; Sara de Mateo; Ricardo Orozco-Solis; Nicholas J Ceglia; Saurabh Sahar; Sherry A Dilag-Penilla; Kenneth A Dyar; Pierre Baldi; Paolo Sassone-Corsi
Journal:  Cell       Date:  2013-12-19       Impact factor: 41.582

7.  Identification of small molecule activators of cryptochrome.

Authors:  Tsuyoshi Hirota; Jae Wook Lee; Peter C St John; Mariko Sawa; Keiko Iwaisako; Takako Noguchi; Pagkapol Y Pongsawakul; Tim Sonntag; David K Welsh; David A Brenner; Francis J Doyle; Peter G Schultz; Steve A Kay
Journal:  Science       Date:  2012-07-12       Impact factor: 47.728

8.  Transcriptional architecture and chromatin landscape of the core circadian clock in mammals.

Authors:  Nobuya Koike; Seung-Hee Yoo; Hung-Chung Huang; Vivek Kumar; Choogon Lee; Tae-Kyung Kim; Joseph S Takahashi
Journal:  Science       Date:  2012-08-30       Impact factor: 47.728

9.  Calorie restriction regulates circadian clock gene expression through BMAL1 dependent and independent mechanisms.

Authors:  Sonal A Patel; Nikkhil Velingkaar; Kuldeep Makwana; Amol Chaudhari; Roman Kondratov
Journal:  Sci Rep       Date:  2016-05-12       Impact factor: 4.379

10.  Characterization of primary human hepatocyte spheroids as a model system for drug-induced liver injury, liver function and disease.

Authors:  Catherine C Bell; Delilah F G Hendriks; Sabrina M L Moro; Ewa Ellis; Joanne Walsh; Anna Renblom; Lisa Fredriksson Puigvert; Anita C A Dankers; Frank Jacobs; Jan Snoeys; Rowena L Sison-Young; Rosalind E Jenkins; Åsa Nordling; Souren Mkrtchian; B Kevin Park; Neil R Kitteringham; Christopher E P Goldring; Volker M Lauschke; Magnus Ingelman-Sundberg
Journal:  Sci Rep       Date:  2016-05-04       Impact factor: 4.379

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