| Literature DB >> 35606726 |
Luisa Salazar-Vizcaya1, Andrew Atkinson2, Andreas Kronenberg3, Catherine Plüss-Suard3, Roger D Kouyos4,5, Viacheslav Kachalov4,5, Nicolas Troillet6, Jonas Marschall2, Rami Sommerstein7.
Abstract
BACKGROUND: Future prevalence of colonization with extended-spectrum betalactamase (ESBL-) producing K. pneumoniae in humans and the potential of public health interventions against the spread of these resistant bacteria remain uncertain.Entities:
Keywords: ESBL-producing Klebsiella pneumoniae; Mathematical model; Public health intervention; Resistance
Mesh:
Substances:
Year: 2022 PMID: 35606726 PMCID: PMC9125893 DOI: 10.1186/s12879-022-07441-z
Source DB: PubMed Journal: BMC Infect Dis ISSN: 1471-2334 Impact factor: 3.667
Fig. 1Simplified model structure. The model considers community and hospital settings interconnected by hospitalizations and dismissals. Transmission within each setting is simulated by means of a core model with setting specific parameters. In the core model (right black box), uncolonized individuals can have «normal» () and «amplified» ( susceptibility to colonization, reflecting increased risk of colonization associated with antimicrobial therapy (dark, orange arrows). Colonization with ESBL-producing Klebsiella pneumoniae (red arrows) can occur through human-to-human contact locally (within hospitals and the community) and through external sources (e.g., traveling to high-prevalence areas and contaminated food). Colonized individuals are classified into two levels according to their ability to transmit the resistant pathogen: «normal» infectiousness () and «amplified» infectiousness (dark, orange arrows). The model explicitly accounts for infections caused by ESBL producing K. pneumoniae with inadequate antimicrobial treatment , otherwise ). *ESBL-producing K. pneumonia
Mathematical model parameters
| Symbol | Description | Value | Source |
|---|---|---|---|
| Biological | |||
| | Coefficient for amplified susceptibility to colonization after therapy with regular antimicrobial | 3 | [ |
| | Coefficient for amplified infectiousness | 2, sensitivity: 1, 3 | [ |
| ω | Susceptibility/infectiousness amplification factor for neutral antimicrobials with respect to regular ones | 0.5 | Assumption based on [ |
| λ | Probability of clearing resistance to regular antimicrobials following treatment with restricted antimicrobials | 0.8 | Assumption (expert guess) |
| α | Rate of spontaneous clearance of colonization (year−1)1 | 1.4 | [ |
| δ | Delay between end of treatment with restricted antimicrobials and complete resolution of colonization (months) | 1 | Assumption (expert guess) |
| 1/ | Average time to spontaneous clearance of infection in the community (days)2 | 30 | [ |
| Transmission | |||
| | human to human transmission colonization rate in hospitals (year−1) | 10.9 (95% CI: 5.8–20.9) | Model fit |
| | human to human transmission colonization rate in the community (year−1) | 0.67 (95% CI: 0.56–0.79) | Model fit |
| ε3 | External force of colonization equivalent (% by 2015) | 49.04 (95% CI:6–100), sensitivity: 0–60% | Model fit; exogenous values |
| Antimicrobial consumption | |||
| Treatment rate (treatments per year per inhabitant/patient, range) | |||
| Hospital setting | |||
| | Regular antimicrobials | 0.18–0.27 | ANRESIS |
| | Restricted antimicrobials | 0.02–0.04 | ANRESIS |
| | Neutral antimicrobials | 0.26–0.34 | ANRESIS |
| Community setting | |||
| | Regular antimicrobials | 0.71 -0.80 | ANRESIS |
| | Restricted antimicrobials | 0.0031–0.0032 | ANRESIS |
| | Neutral antimicrobials | 1.5–1.71 | ANRESIS |
| Average treatment duration (days) | |||
| | Regular antimicrobials | 8 | Assumption based on clinical routine |
| | Restricted antimicrobials | 5 | Assumption based on clinical routine |
| | Neutral antimicrobials | 8 | Assumption based on clinical routine |
| Hospitalisation rate | 0.061–0.069 | ANRESIS | |
| μh | Average length of hospitalization (days) | 10 | ANRESIS (set to reproduce data) |
| | Fraction of infections resulting in antibiotic therapy that were caused by | 7% | [ |
| | Fraction of infections caused by Klebsiella pneumoniae that were treated with restricted antibiotics (in hospitals)6 | 0.026 | ANRESIS |
| | Fraction of infections caused by Klebsiella pneumoniae that were treated with restricted antibiotics (in the community)6 | 0.019 | ANRESIS |
1Average of values reported in the references
2Duration of colonization as proxy
3External force of colonization equivalent: Fraction of observed prevalence of colonization with ESBL-producing Klebsiella pneumonia atrributed to external sources
4Corresponds to a slope of increase in the external force of colonization of 0.13 [95% CI: 0.02 − 0.26] × 10 −3 per year
5Average of fractions reported in the references
6Approximated by assuming that all invasive infections result in treatment with restricted antimicrobials after failure with regular ones
Fig. 2Measured prevalence, model fit and projections of colonization with ESBL-producing Klebsiella pneumoniae for a range of external forces of colonization. Data from ANRESIS (grey dots and error bars with 95% confidence intervals). Projected future incidence in hospitals decreased monotonously with increasing external force of colonization. *The external force of colonization equivalent is a proxy for the fraction of observed prevalence by 2017 attributable to external sources
Fig. 3Projections of colonization with ESBL-producing Klebsiella pneumoniae for representative scenarios/strategies. Scenarios included changing: antimicrobial consumption (A ,B and D), and in-hospital transmission rate (C). In A scenarios of antimicrobial consumption included changes in all types of antimicrobials, while in B they included only antibiotics of the carbapenem class. D displays the comparison between the prevalence in 2019 and 2025 in A. The error bars show 95% confidence intervals over 243 iterations