Literature DB >> 35604448

Analysis of the MCTP Amino Acid Sequence Reveals the Conservation of Putative Calcium- and Lipid-Binding Pockets Within the C2 Domains In Silico.

José Luis Téllez-Arreola1, Ataúlfo Martínez-Torres2, Adriana E Flores-Moran3, José M Lazaro-Guevara4,5,6, Argel Estrada-Mondragón7.   

Abstract

MCTPs (Multiple C2 Domains and Transmembrane region Proteins) are evolutionarily and structurally related to other C2 proteins, which are central to exocytosis and membrane trafficking; however, their specific function has been little studied. MCTPs are associated with endosomes and the endoplasmic reticulum and possess three C2 domains (C2A-C2C) and two transmembrane regions (TMRs) well conserved in different species. Here, we generated structural models of the MCTP C2 domains of C. elegans and analyzed their putative function by docking, which revealed that these domains possess Ca2+- and lipid-binding pockets, suggesting that MCTPs play a significant, calcium-dependent role in membrane physiology.
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  C2 domain; Calcium signaling; Docking; Membrane traffic

Mesh:

Substances:

Year:  2022        PMID: 35604448     DOI: 10.1007/s00239-022-10057-1

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   3.973


  55 in total

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Authors:  A Betz; P Thakur; H J Junge; U Ashery; J S Rhee; V Scheuss; C Rosenmund; J Rettig; N Brose
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2.  Theoretical foundation of the balanced minimum evolution method of phylogenetic inference and its relationship to weighted least-squares tree fitting.

Authors:  Richard Desper; Olivier Gascuel
Journal:  Mol Biol Evol       Date:  2003-12-23       Impact factor: 16.240

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Authors:  Rafaela Bagur; György Hajnóczky
Journal:  Mol Cell       Date:  2017-06-15       Impact factor: 17.970

4.  Model species in evo-devo: a philosophical perspective.

Authors:  Jessica A Bolker
Journal:  Evol Dev       Date:  2014 Jan-Feb       Impact factor: 1.930

5.  In search of allosteric modulators of a7-nAChR by solvent density guided virtual screening.

Authors:  Raja Dey; Lin Chen
Journal:  J Biomol Struct Dyn       Date:  2011-04

6.  Investigation of the Effect of Bilayer Composition on PKCα-C2 Domain Docking Using Molecular Dynamics Simulations.

Authors:  Mohammad Alwarawrah; Jeff Wereszczynski
Journal:  J Phys Chem B       Date:  2016-12-20       Impact factor: 2.991

7.  Structural basis for the evolutionary inactivation of Ca2+ binding to synaptotagmin 4.

Authors:  Han Dai; Ok-Ho Shin; Mischa Machius; Diana R Tomchick; Thomas C Südhof; Josep Rizo
Journal:  Nat Struct Mol Biol       Date:  2004-08-15       Impact factor: 15.369

8.  RIM C2B Domains Target Presynaptic Active Zone Functions to PIP2-Containing Membranes.

Authors:  Arthur P H de Jong; Carlos M Roggero; Meng-Ru Ho; Man Yan Wong; Chad A Brautigam; Josep Rizo; Pascal S Kaeser
Journal:  Neuron       Date:  2018-03-29       Impact factor: 17.173

9.  Postsynaptic regulation of synaptic plasticity by synaptotagmin 4 requires both C2 domains.

Authors:  Cynthia F Barber; Ramon A Jorquera; Jan E Melom; J Troy Littleton
Journal:  J Cell Biol       Date:  2009-10-12       Impact factor: 10.539

10.  Benchmarking orthology methods using phylogenetic patterns defined at the base of Eukaryotes.

Authors:  Eva S Deutekom; Berend Snel; Teunis J P van Dam
Journal:  Brief Bioinform       Date:  2021-05-20       Impact factor: 11.622

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