| Literature DB >> 35602601 |
Sujin Byeon1, Bailey Werner2, Reilly Falter2, Kristian Davidsen3, Calvin Snyder2, Shao-En Ong2, Smita Yadav2.
Abstract
Septins are a family of cytoskeletal proteins that regulate several important aspects of neuronal development. Septin 7 (Sept7) is enriched at the base of dendritic spines in excitatory neurons and mediates both spine formation and spine and synapse maturation. Phosphorylation at a conserved C-terminal tail residue of Sept7 mediates its translocation into the dendritic spine head to allow spine and synapse maturation. The mechanistic basis for postsynaptic stability and compartmentalization conferred by phosphorylated Sept7, however, is unclear. We report herein the proteomic identification of Sept7 phosphorylation-dependent neuronal interactors. Using Sept7 C-terminal phosphopeptide pulldown and biochemical assays, we show that the 14-3-3 family of proteins specifically interacts with Sept7 when phosphorylated at the T426 residue. Biochemically, we validate the interaction between Sept7 and 14-3-3 isoform gamma and show that 14-3-3 gamma is also enriched in the mature dendritic spine head. Furthermore, we demonstrate that interaction of phosphorylated Sept7 with 14-3-3 protects it from dephosphorylation, as expression of a 14-3-3 antagonist significantly decreases phosphorylated Sept7 in neurons. This study identifies 14-3-3 proteins as an important physiological regulator of Sept7 function in neuronal development.Entities:
Keywords: 14-3-3; dendritic spines; phosphoregulation; proteomics; septin
Year: 2022 PMID: 35602601 PMCID: PMC9114808 DOI: 10.3389/fcell.2022.836746
Source DB: PubMed Journal: Front Cell Dev Biol ISSN: 2296-634X
FIGURE 1TAO kinases phosphorylate the C-terminal tail of Sept7 during neuronal development. (A) Top: multiple sequence alignment of the C-terminal tail of Sept7 demonstrating its evolutionarily conserved sequence including the phosphorylation site. The phosphorylated residue T426 is shown in orange. Bottom: AlphaFold2.0 predicted protein structure of Sept7. Magnified inset depicts the T426 phosphorylation site (red) in the C terminal tail of Sept7. (B) Western blot shows kinase activity of sfGFP-TAOK2α, sfGFP-TAOK1, or sfGFP-TAOK2β expressed in HEK293T cells, immunoprecipitated with GFP antibody, and incubated with purified GST-Sept7 C-terminal tail (321–438 amino acids) for an in vitro kinase reaction. Substrate phosphorylation was determined by probing for phosphorylated Sept7 using the pT426 antibody. Total Sept7 was detected by antibody against GST tag. TAO kinase autophosphorylation was determined by probing for phosphorylated S181 residue. (C) Quantification of protein band intensity of Western blot in (B). Bar graph displays the ratio of phosphorylated Sept7 band intensity to GST band intensity for each TAO kinase construct in which no significant difference was observed between TAOK2α and TAOK1 kinases. Error bars represent standard error of mean from n = 4 experiments. (D) Rat hippocampal neurons at DIV3, 10, and 16 were fixed and immunostained for endogenous phosphorylated Sept7 T426 and dendritic protein Map2. Scale bar represents 10 μm. (E) Mean fluorescence intensity of phosphorylated Sept7 T426 at distinct stages of neuronal development DIV3, 10, and 16 are plotted. Error bars represent standard error of mean for n = 20 neurons from three different experiments. Dunnett’s multiple comparison shows significant changes in pSept7 levels between each stage.
FIGURE 2Phosphorylation of Sept7 alters its localization and dynamics. (A) Hippocampal neurons were transfected with GFP-tagged Sept7-WT, phosphomimetic Sept7-T426D, or phosphomutant Sept7-T426A along with membrane marker myristoylated-tdTomato at DIV9 and then fixed at DIV11. Phosphomimetic GFP-Sept7 (T426D) expression leads to early maturation of dendritic spines compared to Sept7-WT, while phosphomutant Sept7-T426A expressing neurons exhibited only filopodial protrusions. (B) Montage of time lapse images showing DIV11 hippocampal neurons transfected at DIV9 with GFP-tagged wild-type Sept7-WT, phosphomimetic Sept7-T426D, or phosphomutant Sept7-T426A. Phosphomimetic Sept7-T426D is stably localized within the dendritic spine head, phosphomutant Sept7-T426A localizes to the base of the dendritic spine, whereas the wild-type Sept7-WT shows dynamic changes in its localization within protrusions. Scale bar represents 5 µm (green) and 1 µm (montage), respectively. (C) Quantification of GFP intensity in protrusions of DIV11 neurons transfected with GFP-tagged wild-type Sept7-WT, phosphomimetic Sept7-T426D, and phosphomutant Sept7-T426A. Values represent mean intensity, error bars represent SEM and n = 50 protrusions from 10 neurons in each condition. Dunnett’s multiple comparison test, p < 0.0001.
FIGURE 3Proteomic identification of Septin 7 phosphorylation-dependent binding partners. (A) Workflow shows the proteomic strategy for identifying Sept7 phosphorylation-dependent binding partners. (B) Volcano plot displays the difference in association of proteins with phosphorylated (pT246) Sept7 versus unphosphorylated Sept7 based on five replicate pulldowns. 14-3-3 protein isoforms are labeled in red. (C) The protein–protein association network of candidate pSept7 interaction partners. The STRING network of identified proteins that significantly associate with phosphorylated Sept7 tail (pT426) versus non-phosphorylated Sept7 tail. Network nodes represent interacting proteins, and network edges indicate both functional and physical protein associations. Strength of the association is denoted by the thickness of the edges. (D) 14-3-3 family of proteins as well as several actin binding and depolymerizing proteins were found to significantly associate with Sept7 when phosphorylated at T426.
List of proteins identified by Mass Spectrometry that associate with Septin 7 when phosphorylated at residue T426.
| Protein name | Gene | Function |
|---|---|---|
| 14-3-3 protein gamma | Ywhag | Binds phospho S/T proteins and moduIates their of activity |
| 14-3-3 protein zeta/delta | Ywhaz | Binds phospho S/T proteins and modulates their of activity |
| Myotrophin | Mtpn | Regulates growth of actin filaments. Inhibits the activity of the F-actin-capping protein complex |
| Destrin | Dstn | Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers (G-actin) |
| Fascin | Fscnl | Organization of actin filament bundles and the formation of microspikes and stress fibers |
| Profilin-2 | Pfn2 | Binds to actin and affects the structure of the cytoskeleton |
| Cofilin-1 | Cfll | Binds to F-actin and exhibits F-actin depolymerizing activity |
| Glutamine synthetase | Glul | Catalyzes the production ofglutamine and 4-am inobutanoate (gamma-aminobutyric acid, GABA) |
| Histidine triad nucleotide-binding protein 1 | Hintl | Hydrolyzes purine nucleotide phosphoramidates |
| Triosephosphate isomerase | Tpil | Triosephosphate isomerase 1 |
| Eukaryotic translation initiationfactor 5A-1; 5A-2 | Eif5a; Eif5a2 | mRNA-binding protein involved in translation elongation |
| Fatty acid-binding protein, brain | Fabp7 | Belongs to the calycin superfamily |
| Translationally-controlled tumor protein | Tptl | Involved in calcium binding and microtubule stabilization |
| Heterogenous nuclear ribonucleo protein A3 | Gm6793; Gm9242; Hnrnpa3 | Plays a role in cytoplasmic trafficking of RNA |
| SUMO-conjugating enzyme UBC9 | Ube2i | Necessary for sumoylation |
| Protein SET | Set | Multitasking protein, involved in apoptosis, transcription, and histone chaperoning |
| Guanine nucleotide-binding protein G(l)/G(S)/G(T) subunit beta-1; beta-2; beta-4 | Gnb1; Gnb2; Gnb4 | Guanine nucleotide-bind ing proteins act as a modulator in various transmembrane signaling events |
| NEDD8-conjugating enzyme Ubc12 | Ube2m | Ubiquitin conjugating enzyme |
| Ubiquitin-conjugating enzyme E2 D2; Ubiquitin-conjugating enzyme E2 D3; D2B | Ube2d2; Ube2d3; Ube2d2b | Ubiquitin conjugating enzyme |
| Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform | Ppp2r2a | Protein Phosphatase |
| Serine/arginine-rich splicing factor 2 | Srsf2 | Necessary for thesplicing of pre-mRNA |
| ADP/ATP translocase 1 | Slc25a4 | Involved in mitochondrial ADP/ATP transport |
| Peptidyl-prolyl cis-trans isomerase A; Peptidyl-prolyl cis-trans isomerase A | Ppia | PPlases accelerate the folding of proteins |
| 14 kDa phosphohistidine phosphatase | Phptl | Exhibits phosphohistidine phosphatase activity |
| Hepatoma-derived growth factor-related protein 2 | Hdgfrp2 | Associates with chromatin |
| Histone H4 | Histlh4a | Core component of nucleosome |
| Obg-like ATPase 1 | Olal | Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency |
| Small nuclear ribonucleoprotein Sm D3 | Snrpd3 | plays an important role in the splicing of cellular pre-mRNAs |
|
| Ldha | Lactatedehydrogenase A |
| Phosphoglycerate kinase 1 | Pgkl | Catalyzes one ofthe two ATP producing reactions in theglycolytic pathway |
| Aconitate hydratase, mitochondrial | Aco2 | Catalyzes the isomerization of citrateto isocitrate |
| Creatine kinase B-type | Ckb | Reversibly catalyzes thetransfer of phosphate between ATP and various phosphogens |
| Nucleolin | Ncl | Induces chromatin decondensation by binding to histone H1 |
FIGURE 414-3-3γ associates with phosphorylated Sept7 and enhances dendritic spine maturation. (A) Western blot of endogenous 14-3-3 protein in DIV18 hippocampal neurons immunoprecipitated with 14-3-3 (pan) antibody and probed for 14-3-3 and phosphorylated Sept7 (pT426) (n = 3 experiments). (B) Western blot of HA-14-3-3γ, HA-14-3-3ζ, or both HA-tagged isoforms co-expressed along with GFP-Sept7 in HEK293T cells immunoprecipitated with HA antibody and probed for HA and phosphorylated Sept7 (pT426). Phosphorylated Sept7 co-immunoprecipitated with HA-14-3-3γ and HA-14-3-3(ζ+γ) but not HA-14-3-3ζ (n = 3 experiments). (C) Western blot shows coimmunoprecipitation of phosphorylated Sept7 with endogenous 14-3-3γ. Lysate from DIV18 hippocampal neurons immunoprecipitated with 14-3-3 (gamma) antibody and probed for 14-3-3γ and phosphorylated T426 Sept7 (n = 3 experiments). (D) Western blot shows phosphorylation dependent interaction of Sept7 with endogenous 14-3-3γ. DIV18 hippocampal neurons were treated with okadaic acid (OA) or DMSO, and lysate treated with or without lambda protein phosphatase (PP) were then immunoprecipitated with 14-3-3 (gamma) antibody and probed for 14-3-3γ and total Sept7 (n = 3 experiments). (E) Fixed images of DIV14 hippocampal neurons co-transfected with membrane marker myristoylated tdTomato and HA-14-3-3γ or HA-14-3-3ζ were immunostained for HA tag. Scale bar is 10µm, and image psuedocolored to represent fluorescence intensity. (F) Bar graph depicts percent of protrusions with mature, spiny morphology in DIV14 hippocampal neurons transfected with HA-14-3-3γ or HA-14-3-3ζ. HA-14-3-3γ expression results in significantly more spiny, mature protrusions (p < 0.05). Values indicate mean, error bars represent SEM and n > 8 neurons each. (G) Bar graph shows ratio of 14-3-3 fluorescent intensity in spines to intensity in corresponding dendritic shaft in DIV14 hippocampal neurons transfected with HA-14-3-3γ or HA-14-3-3ζ. Values indicate mean percent, error bars represent standard error of mean, and n = 20 spines from five neurons each.
FIGURE 5Association with 14-3-3 protects phosphorylation state of Sept7. (A) Fixed images of DIV16 hippocampal neurons transfected at DIV14 with EYFP-control or EYFP-Difopein (magenta), scale bar is 10 μm. Yellow inset is magnified to highlight dendritic protrusions shown in inverted grayscale, scale bar is 5 μm. Bottom row shows levels of pSept7 immunostaining (gray) in the neuronal soma of control and difopein-transfected (magenta) neurons. Transfected neurons are depicted by yellow asterisk, and scale bar is 5 μm. (B) Quantification of phosphorylated Sept7 levels in the soma of DIV16 hippocampal neurons expressing YFP-control or YFP-Difopein. YFP-Difopein expression results in significantly decreased levels of phosphorylated Sept7 (p < 0.0001). Values indicate mean; error bars represent SEM; and n = 13 and 15 neurons, respectively, from three distinct experiments. (C) Density of mushroom spiny protrusions in DIV16 hippocampal neurons expressing YFP-control or YFP-Difopein. Values indicate mean, error bars represent SEM, and n = 11 neurons each from three distinct experiments. (D) Schematic summarizes findings of this study showing 14-3-3 protein association modulates Sept7 function in neurons through protection of its phosphorylation state.