| Literature DB >> 35596167 |
Mostafa Shanbehzadeh1, Azita Yazdani2, Mohsen Shafiee3, Hadi Kazemi-Arpanahi4,5.
Abstract
INTRODUCTION: The COVID-19 pandemic overwhelmed healthcare systems with severe shortages in hospital resources such as ICU beds, specialized doctors, and respiratory ventilators. In this situation, reducing COVID-19 readmissions could potentially maintain hospital capacity. By employing machine learning (ML), we can predict the likelihood of COVID-19 readmission risk, which can assist in the optimal allocation of restricted resources to seriously ill patients.Entities:
Keywords: COVID-19; Data mining; Machine learning; Patient readmission
Mesh:
Year: 2022 PMID: 35596167 PMCID: PMC9122247 DOI: 10.1186/s12911-022-01880-z
Source DB: PubMed Journal: BMC Med Inform Decis Mak ISSN: 1472-6947 Impact factor: 3.298
A list of variables and their corresponding category utilized in predicting COVID-19 readmission risk
| Type | Category | Variables |
|---|---|---|
| Inputs | Demographic characteristics | Age, sex, height, weight, blood group, hospitalization length of stay (LOS) |
| Clinical manifestation | Dry cough, nausea, headache, gastrointestinal (GI) manifestation, Chill, loss of taste and smell, rhinorrhea, sore throat, contusion, high body temperature, muscular pain, vomiting, dyspnea | |
| Past medical history and comorbidities | Cardiac disease, smoking, pneumonia, hypertension (diastolic/ systolic), alcohol addiction, diabetes, and other underline diseases | |
| Laboratory results | Red-cell count, hematocrit, hemoglobin, absolute lymphocyte count, blood calcium, blood potassium, absolute neutrophil count, alanine aminotransferase (ALT), magnesium, prothrombin time, alkaline phosphatase, platelet count, hypersensitive troponin creatinine, white cell count, aspartate aminotransferase (ASP), blood glucose, total bilirubin, erythrocyte sedimentation rate (ESR), C-reactive protein(CRP), albumin, thromboplastin time, lactate dehydrogenase (LDH), D-dimer, blood phosphorus, blood sodium, and blood urea nitrogen (BUN), oxygen saturation | |
| Radiological factors | Pleural fluid, consolidation | |
| Treatment | Oxygen therapy | |
| Output | Readmission: yes (1), no (0) | |
Fig. 1The proposed method framework for predicting the risk of COVID-19 readmission
Definitions of evaluation metrics
| Performance measures | Definitions |
|---|---|
| Precision | TP/(TP + FP) |
| Specificity/true negative rate (TNR) | TN/(TN + FP) |
| Sensitivity/true positive rate (TPR) or Recall | TP/(TP + FN) |
| Accuracy | (TP + TN)/(TP + TN + FP + FN) |
| F-measure | (2 × Precision × Recall)/ (Precision + Recall) |
*True positive (TP), true negative (TN), false positive (FP), false negative (FN)
Comparison of algorithms in terms of different criteria in 20 runs
| Measure | Algorithms | |||||
|---|---|---|---|---|---|---|
| GA | PSO | DE | GWO | HHO | HOA | |
| Mean fitness value | 0.101 (95% CI 0.103 to 0.099) | 0.095 (95% CI 0.096 to 0.094) | 0.096 95% CI 0.095 to 0.097) | 0.098 (95% CI 0.099 to 0.097) | 0.101 (95% CI 0.102 to 0.099) | 0.083 (95% CI 0.082 to 0.084) |
| Accuracy | 0.891 (95% CI 0.888 to 0.894) | 0.903 (95% CI 0.901 to 0.905) | 0.904 (95% CI 0.903 to 0.905) | 0.900 (95% CI 0.901 to 0.899) | 0.892 (95% CI 0.891 to 0.893) | 0.924 (95% CI 0.923 to 0.925) |
| No. selected features | 18 | 21 | 20 | 24 | 19 | 17 |
The performance of ML algorithms before and after preprocessing
| ML algorithm | Accuracy | Precision | Recall | Specificity | F-Measure | F.a. r | p-value | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| b.p | a.p | b.p | a.p | b.p | a.p | b.p | a.p | b.p | a.p | |||
| Decision tree | 0.761 | 0.958 | 0.564 | 0.961 | 0.534 | 0.903 | 0.906 | 0.982 | 0.547 | 0.922 | 2.04 | 0.0091 |
| SVM | 0.457 | 0.821 | 0.287 | 0.743 | 0.412 | 0.792 | 0.375 | 0.921 | 0.336 | 0.767 | 4 | 0.0001 |
| KNN | 0.526 | 0.941 | 0.462 | 0.942 | 0.485 | 0.765 | 0.912 | 0.961 | 0.471 | 0.823 | 2.201 | 0.0063 |
| Proposed model | 0.782 | 0.9705 | 0.8064 | 0.9729 | 0.8333 | 0.9863 | 0.7 | 0.9259 | 0.8196 | 0.9795 | 2.187 | 0.0065 |
b.p Before preprocessing, a.p after preprocessing, F.a. r Friedman aligned ranks
Fig. 2ROC curve for the proposed model