Zhaoxue Zhang1, Rongyu Liu1, Shubin Liu1, Taichang Mu1, Xiuguo Zhang1, Jiwen Xia1. 1. Shandong Provincial Key Laboratory for Biology of Vegetable Diseases and Insect Pests, College of Plant Protection, Shandong Agricultural University, Taian, 271018, China Shandong Agricultural University Taian China.
Abstract
Species of Sporocadaceae have often been reported as plant pathogens, endophytes or saprophytes and are commonly isolated from a wide range of plant hosts. The isolated fungi were studied through a complete examination, based on multilocus phylogenies from combined datasets of ITS/tub2/tef1, in conjunction with morphological characteristics. Nine strains were isolated from Ficusmicrocarpa, Ilexchinensis and Schimasuperba in China which represented four species, viz., Monochaetiaschimae sp. nov., Neopestalotiopsishaikouensis sp. nov., Neopestalotiopsispiceana and Pestalotiopsislicualicola. Neopestalotiopsispiceana was a new country record for China and first host record from Ficusmacrocarpa. Pestalotiopsislicualicola was first report from Ilexchinensis in China. Zhaoxue Zhang, Rongyu Liu, Shubin Liu, Taichang Mu, Xiuguo Zhang, Jiwen Xia.
Species of Sporocadaceae have often been reported as plant pathogens, endophytes or saprophytes and are commonly isolated from a wide range of plant hosts. The isolated fungi were studied through a complete examination, based on multilocus phylogenies from combined datasets of ITS/tub2/tef1, in conjunction with morphological characteristics. Nine strains were isolated from Ficusmicrocarpa, Ilexchinensis and Schimasuperba in China which represented four species, viz., Monochaetiaschimae sp. nov., Neopestalotiopsishaikouensis sp. nov., Neopestalotiopsispiceana and Pestalotiopsislicualicola. Neopestalotiopsispiceana was a new country record for China and first host record from Ficusmacrocarpa. Pestalotiopsislicualicola was first report from Ilexchinensis in China. Zhaoxue Zhang, Rongyu Liu, Shubin Liu, Taichang Mu, Xiuguo Zhang, Jiwen Xia.
The family was established by Corda in 1842 (type genus: ). Species of are endophytic, plant pathogenic or saprobic, and associated with a wide range of host plants (Maharachch. et al. 2013; Jayawardena et al. 2015; Liu et al. 2019). Currently, the family comprises 35 genera including (Sacc.) Allesch., Maharachch. et al., Steyaert, Maharachch.et al., and etc. Most genera have multi-septate and more or less fusiform conidia with appendages at one or both ends, frequently with some melanised cells. Also known as pestalotioid fungi, resembling those taxa having affinities with (Liu et al. 2019).Steyaert (1949) segregated two novel genera from , namely (with 5-celled conidia) and (with 4-celled conidia) based on the conidial forms. This resulted in apparent controversy from Guba (1956, 1961). He emphasised that there was no point in assembling species with similar numbers of conidial septa into distinct genera. Subsequently, Steyaert (1953, 1961, 1963) provided further evidence in support of splitting . Sutton (1980) accepted most of the genera discussed here (, , ) which fitted into fairly well-defined groups and cited the electron microscope investigation of Griffiths and Swart (1974), which examined the conidial wall of and two species of ( and ) to support Steyaert’s division of . Maharachch. et al. 2014 segregated two novel genera from , namely and , based on conidia pigment colour, conidiophores and molecular phylogeny. can be easily distinguished from and by its versicolourous median cells (Maharachch. et al. 2014). Saccardo (1884) introduced as a subgenus of (as ). The genus was introduced by Allescher (1902), which included 23 species. Allescher (1902) designated the type which has a single apical appendage (Guba 1961; Maharachch. et al. 2014; Senanayake et al. 2015). Steyaert (1949) transferred numerous species to or . More than 40 species of were recognised by the monograph of Guba (1961). There are 127 epithets in the Index Fungorum (accession date: 31 March 2022) and most have been transferred to other genera such as , and (Nag Raj 1993; Maharachch. et al. 2011, 2014, 2016). and have obvious morphological differences and show separate clades (de Silva et al. 2017).To date, most phylogenetic studies addressing genera of have been based solely on ITS and LSU sequences (Barber et al. 2011; Tanaka et al. 2011; Jaklitsch et al. 2016), or on concatenated datasets of more genes but with incomplete datasets (Senanayake et al. 2015; Wijayawardene et al. 2016). In this study, we made a collection of the established genera , and species from leaves of , and in Hainan Province, China. The inventories allowed establishing two new species that are described here.
Materials and methods
Isolation and morphological studies
The samples were collected from Hainan Province, China. The strains were isolated from diseased leaves of , and using surface disinfected tissue fragments (0.5 × 0.5 cm) taken from the margin of leaf lesions (Gao et al. 2014; Jiang et al. 2021a). Surface disinfection consisted of steps including immersion in 75% ethanol for 30 s, 5% sodium hypochlorite (Aladdin, Shanghai, China) for 1 min, and sterile distilled water for 30 s. The pieces were dried with sterilized paper towels and placed on potato dextrose agar (PDA). All plates were incubated at 25 °C for 3–4 days. Then, hyphae were picked out of the periphery of the colonies and inoculated onto new PDA plates. Photographs of the colonies were taken at 7 and 15 days using a Powershot G7X mark II digital camera. Micromorphological characters were observed using an Olympus SZX10 stereomicroscope and Olympus BX53 microscope, all fitted with Olympus DP80 high definition colour digital cameras to photo-document fungal structures. The size of conidia was measured by software Digimizer (https://www.digimizer.com/), and thirty individual measurements were obtained for each character. All fungal strains were stored in 10% sterilised glycerin at 4 °C for further studies. The holotype specimens were deposited in the Herbarium of Plant Pathology, Shandong Agricultural University (HSAUP). Ex-type cultures were deposited in theShandong Agricultural University Culture Collection (SAUCC). Taxonomic information on the new taxa was submitted to MycoBank (http://www.mycobank.org).
DNA extraction and amplification
Genomic DNA was extracted from fungal mycelium grown on PDA using cetyltrimethylammonium bromide (CTAB) protocol as described in Guo et al. (2000). The internal transcribed spacer regions with intervening 5.8S nrRNA gene (ITS) and partial beta-tubulin (tub2) and translation elongation factor 1-alpha (tef1) genes were amplified and sequenced by using primers pairs ITS5/ITS4 (White et al. 1990), T1/Bt2b (Glass and Donaldson 1995; O’Donnell and Cigelnik 1997), and EF1-728F/EF-2 (O’Donnell et al. 1998; Carbone and Kohn 1999).PCR was performed using an Eppendorf Master Thermocycler (Hamburg, Germany). Amplification reactions were performed in a 50 μL reaction volume, which contained 25 μL Green Taq Mix (Vazyme, Nanjing, China), 2 μL of each forward and reverse primer (10 μM) (Tsingke, Beijing, China), and 2 μL template genomic DNA, to which distilled deionized water was added. PCR parameters were as follows: 94 °C for 5 min, followed by 35 cycles of denaturation at 94 °C for 30 s, annealing at a suitable temperature for 30 s, extension at 72 °C for 1 min and a final elongation step at 72 °C for 7 min. Annealing temperature was 55 °C for ITS, 54 °C for tub2, 52 °C for tef1. The PCR products were visualised on 1% agarose electrophoresis gel. Sequencing was done bi-directionally, conducted by the Tsingke Biotechnology Company Limited (Qingdao, China). Consensus sequences were obtained using MEGA 7.0 or MEGA-X (Kumar et al. 2016). All sequences generated in this study were deposited in GenBank (Table 1).
Table 1.
Species and GenBank accession numbers of DNA sequences used in this study. New sequences are in bold.
Species
Strain
Host/substrate
Country
GenBank accession number
Reference
ITS
tef1
tub2
Bartaliniarobillardoides
CBS 122705 T
Leptoglossusoccidentalis
Italy
LT853104
LT853202
LT853252
Bonthond et al. 2018
Ciliochorellaphanericola
MFLUCC 14-0984 T
Phanerapurpurea
Thailand
KX789680
–
KX789682
Jiang et al. 2021b
MFLUCC 12-0310
Phanerapurpurea
Thailand
KF827444
KF827477
KF827478
Jiang et al. 2021b
Monochaetiacastaneae
CFCC 54354 = SM9-1 T
Castaneamollissima
China
MW166222
MW199741
MW218515
Jiang et al. 2021b
SM9-2
Castaneamollissima
China
MW166223
MW199742
MW218516
Jiang et al. 2021b
M.dimorphospora
NBRC 9980
Castaneapubinervis
Japan
LC146750
–
–
Liu et al. 2019
M.ilicis
KUMCC 15-0520 T
Ilex sp.
China
KX984153
–
–
de Silva et al. 2017
CBS 101009
Air
Japan
MH553953
MH554371
MH554612
Liu et al. 2019
M.junipericola
CBS 143391 T
Juniperuscommunis
Germany
MH107900
MH108021
MH108045
Crous et al. 2018
M.kansensis
PSHI2004Endo1030
Cyclobalaopsismyrsinaefolia
China
DQ534044
–
DQ534047
Liu et al. 2006
PSHI2004Endo1031
Cyclobalaopsismyrsinaefolia
China
DQ534045
–
DQ534048
Liu et al. 2006
M.monochaeta
CBS 546.80
Culture contaminant
Netherlands
MH554056
MH554491
MH554732
Liu et al. 2019
CBS 199.82 T
Quercuspubescens
Italy
MH554018
–
MH554694
Liu et al. 2019
CBS 115004
Quercusrobur
Netherlands
AY853243
MH554398
MH554639
Liu et al. 2019
M.quercus
CBS 144034 T
Quercuseduardi
Mexico
MH554171
MH554606
MH554844
Liu et al. 2019
M.schimae
SAUCC212201 T
Schimasuperba
China
MZ577565
OK104874
OK104867
This study
SAUCC212202
Schimasuperba
China
MZ577566
OK104875
OK104868
This study
SAUCC212203
Schimasuperba
China
MZ577567
OK104876
OK104869
This study
M.sinensis
HKAS 10065 T
Quercus sp.
China
MH115995
–
MH115999
de Silva et al. 2018
Neopestalotiopsisacrostichi
MFLUCC 17-1754 T
Acrostichumaureum
Thailand
MK764272
MK764316
MK764338
Norphanphoun et al. 2019
N.alpapicalis
MFLUCC 17-2544 T
Rhizophoramucronata
Thailand
MK357772
MK463547
MK463545
Kumar et al. 2019
N.aotearoa
CBS 367.54 T
Canvas
New Zealand
KM199369
KM199526
KM199454
Maharachch. et al. 2014
N.asiatica
MFLUCC 12-0286 T
Unidentified tree
China
JX398983
JX399049
JX399018
Maharachch. et al. 2012
CFCC 54339 = SM32
Castaneamollissima
China
MW166224
MW199743
MW218517
Jiang et al. 2021b
N.brachiata
MFLUCC 17-1555 T
Rhizophoraapiculata
Thailand
MK764274
MK764318
MK764340
Norphanphoun et al. 2019
N.brasiliensis
COAD 2166 T
Psidiumguajava
Brazil
MG686469
MG692402
MG692400
Bezerra et al. 2018
CFCC 54341 = ZY4
Castaneamollissima
China
MW166229
MW199748
MW218522
Jiang et al. 2021b
ZY4-2D
Castaneamollissima
China
MW166230
MW199749
MW218523
Jiang et al. 2021b
N.chiangmaiensis
MFLUCC 18-0113 T
Dead leaves
Thailand
–
MH388404
MH412725
Tibpromma et al. 2018
N.chrysea
MFLUCC 12-0261 T
Pandanus sp.
China
JX398985
JX399051
JX399020
Maharachch. et al. 2012
N.clavispora
MFLUCC 12-0281 T
Magnolia sp.
China
JX398979
JX399045
JX399014
Maharachch. et al. 2012
N.cocoes
MFLUCC 15-0152 T
Cocosnucifera
Thailand
KX789687
KX789689
–
Norphanphoun et al. 2019
N.coffea-arabica
HGUP 4019 T
Coffeaarabica
China
KF412649
KF412646
KF412643
Song et al. 2013
N.cubana
CBS 600.96 T
Leaf litter
Cuba
KM199347
KM199521
KM199438
Maharachch. et al. 2014
N.dendrobii
MFLUCC 14-0106 T
Dendrobiumcariniferum
Chiang Rai, Thailand
MK993571
MK975829
MK975835
Ma et al. 2019
N.egyptiaca
CBS 140162 T
Mangiferaindica
Egypt
KP943747
KP943748
KP943746
Crous et al. 2015
N.ellipsospora
MFLUCC 12-0283 T
Dead plant materials
China
JX398980
JX399047
JX399016
Maharachch. et al. 2012
N.eucalypticola
CBS 264.37 T
Eucalyptusglobulus
–
KM199376
KM199551
KM199431
Maharachch. et al. 2014
N.foedans
CGMCC 3.9123 T
Mangrove plant
China
JX398987
JX399053
JX399022
Maharachch. et al. 2012
N.formicidarum
CBS 362.72 T
Dead ant
Ghana
KM199358
KM199517
KM199455
Maharachch. et al. 2014
CBS 115.83
Plant debris
Cuba
KM199344
KM199519
KM199444
Maharachch. et al. 2014
N.hadrolaeliae
COAD 2637 T
Hadrolaeliajongheana
Minas Gerais, Brazil
MK454709
MK465122
MK465120
Freitas et al. 2019
N.haikouensis
SAUCC212271 T
Ilexchinensis
China
OK087294
OK104877
OK104870
This study
SAUCC212272
Ilexchinensis
China
OK087295
OK104878
OK104871
This study
N.honoluluana
CBS 114495 T
Telopea sp.
USA
KM199364
KM199548
KM199457
Maharachch. et al. 2014
N.iraniensis
CBS 137768 T
Fragariaananassa
Iran
KM074048
KM074051
KM074057
Ayoubi et al. 2016
N.javaensis
CBS 257.31 T
Cocosnucifera
Indonesia
KM199357
KM199543
KM199437
Maharachch. et al. 2014
N.macadamiae
BRIP 63737c T
Macadamiaintegrifolia
Australia
KX186604
KX186627
KX186654
Akinsanmi et al. 2017
N.magna
MFLUCC 12-0652 T
Pteridium sp.
France
KF582795
KF582791
KF582793
Maharachch. et al. 2012
N.mesopotamica
CBS 336.86 T
Pinusbrutia
Iraq
KM199362
KM199555
KM199441
Maharachch. et al. 2014
N.musae
MFLUCC 15-0776 T
Musa sp.
Thailand
KX789683
KX789685
KX789686
Norphanphoun et al. 2019
N.natalensis
CBS 138.41 T
Acaciamollissima
South Africa
KM199377
KM199552
KM199466
Maharachch. et al. 2014
N.pandanicola
KUMCC 17-0175 T
Pandanaceae
China
–
MH388389
MH412720
Tibpromma et al. 2018
N.pernambucana
URM 7148-01 T
Vismiaguianensis
Brazil
KJ792466
KU306739
–
Silvério et al. 2016
N.petila
MFLUCC 17-1738 T
Rhizophoramucronata
Thailand
MK764276
MK764320
MK764342
Norphanphoun et al. 2019
N.phangngaensis
MFLUCC 18-0119 T
Pandanaceae
Thailand
MH388354
MH388390
MH412721
Tibpromma et al. 2018
N.piceana
CBS 394.48 T
Picea sp.
UK
KM199368
KM199527
KM199453
Maharachch. et al. 2014
CBS 254.32
Cocosnucifera
Indonesia
KM199372
KM199529
KM199452
Maharachch. et al. 2014
SAUCC210112
Ficusmicrocarpa
China
OK149224
OK206436
OK206434
This study
SAUCC210113
Ficusmicrocarpa
China
OK149225
OK206437
OK206435
This study
N.protearum
CBS 114178 T
Leucospermumcuneiforme cv. “Sunbird”
Zimbabwe
JN712498
KM199542
KM199463
Maharachch. et al. 2014
N.rhizophorae
MFLUCC 17-1550 T
Rhizophoramucronata
Thailand
MK764278
MK764322
MK764344
Norphanphoun et al. 2019
N.rosae
CBS 124745
Paeoniasuffruticosa
USA
KM199360
KM199524
KM199430
Maharachch. et al. 2014
CBS 101057 T
Rosa sp.
New Zealand
KM199359
KM199523
KM199429
Maharachch. et al. 2014
N.rosicola
CFCC 51992 T
Rosachinensis
China
KY885239
KY885243
KY885245
Norphanphoun et al. 2019
CFCC 51993
Rosachinensis
China
KY885240
KY885244
KY885246
NNorphanphoun et al. 2019
N.samarangensis
MFLUCC 12-0233 T
Syzygiumsamarangense
Thailand
JQ968609
JQ968611
JQ968610
Maharachch. et al. 2012
N.saprophytica
MFLUCC 12-0282 T
Magnolia sp.
China
KM199345
KM199538
KM199433
Maharachch. et al. 2014
N.sichuanensis
CFCC 54338 = SM15-1 T
Castaneamollissima
China
MW166231
MW199750
MW218524
Jiang et al. 2021b
N.sonneratae
MFLUCC 17-1745 T
Sonneronataalba
Thailand
MK764280
MK764324
MK764346
Norphanphoun et al. 2019
N.steyaertii
IMI 192475 T
Eucalytpusviminalis
Australia
KF582796
KF582792
KF582794
Maharachch. et al. 2012
N.surinamensis
CBS 450.74 T
soil under Elaeisguineensis
Suriname
KM199351
KM199518
KM199465
Maharachch. et al. 2014
N.thailandica
MFLUCC 17-1730 T
Rhizophoramucronata
Thailand
MK764281
MK764325
MK764347
Norphanphoun et al. 2019
N.umbrinospora
MFLUCC 12-0285 T
unidentified plant
China
JX398984
JX399050
JX399019
Maharachch. et al. 2012
N.vitis
MFLUCC 15-1265 T
Vitisvinifera cv. “Summer black”
China
KU140694
KU140676
KU140685
Jayawardena et al. 2016
N.zimbabwana
CBS 111495 T
Leucospermumcunciforme cv. “Sunbird”
Zimbabwe
JX556231
KM199545
KM199456
Maharachch. et al. 2014
Nonappendiculataquercina
CBS 116061 T
Quercussuber
Italy
MH553982
MH554400
MH554641
Liu et al. 2019
CBS 270.82
Quercuspubescens
Italy
MH554025
MH554459
MH554701
Liu et al. 2019
Pestalotiopsisaustralasiae
CBS 114126 T
Knightia sp.
New Zealand
KM199297
KM199499
KM199409
Maharachch. et al. 2014
P.australis
CBS 114193 T
Grevillea sp.
Australia
KM199332
KM199475
KM199383
Maharachch. et al. 2014
P.grevilleae
CBS 114127 T
Grevillea sp.
Australia
KM199300
KM199504
KM199407
Maharachch. et al. 2014
P.hollandica
CBS 265.33 T
Sciadopitysverticillata
The Netherlands
KM199328
KM199481
KM199388
Maharachch. et al. 2014
P.kenyana
CBS 442.67 T
Coffea sp.
Kenya
KM199302
KM199502
KM199395
Maharachch. et al. 2014
P.knightiae
CBS 114138 T
Knightia sp.
New Zealand
KM199310
KM199497
KM199408
Maharachch. et al. 2014
P.licualicola
HGUP4057 T
Licualagrandis
China
KC492509
KC481684
KC481683
Geng et al. 2013
SAUCC210087
Ilexchinensis
China
OK087323
OK104879
OK104872
This study
SAUCC210088
Ilexchinensis
China
OK087324
OK104880
OK104873
This study
P.oryzae
CBS 353.69 T
Oryzasativa
Denmark
KM199299
KM199496
KM199398
Maharachch. et al. 2014
P.parva
CBS 278.35
Leucothoefontanesiana
–
KM199313
KM199509
KM199405
Maharachch. et al. 2014
P.portugalica
CBS 393.48 T
–
Portugal
KM199335
KM199510
KM199422
Maharachch. et al. 2014
P.spathuliappendiculata
CBS 144035 T
Phoenixcanariensis
Australia
MH554172
MH554607
MH554845
Liu et al. 2019
Pseudopestalotiopsiscocos
CBS 272.29 T
Cocosnucifera
Indonesia
KM199378
KM199553
KM199467
Maharachch. et al. 2014
Pse.elaeidis
CBS 413.62 T
Elaeisguineensis
Nigeria
MH554044
MH554479
MH554720
Liu et al. 2019
Pse.indica
CBS 459.78 T
Rosasinensis
India
KM199381
KM199560
KM199470
Maharachch. et al. 2014
Seiridiumpapillatum
CBS 340.97 T
Eucalyptusdelegatensis
Australia
LT853102
MH554468
LT853250
Bonthond et al. 2018
Seir.phylicae
CBS 133587 T
Phylicaarborea
Tristan da Cunha
LT853091
LT853188
LT853238
Bonthond et al. 2018
Isolates marked with “T” are ex-type or ex-epitype strains.
Phylogeny
Newly generated sequences in this study were aligned with additional related sequences downloaded from GenBank (Table 1) using MAFFT 7 online service with the Auto strategy (Katoh et al. 2019, http://mafft.cbrc.jp/alignment/server/). To establish the identity of the isolates at the species level, phylogenetic analyses were conducted first individually for each locus and then as combined analyses of three loci (ITS, tub2 and tef1). Phylogenetic analyses were based on maximum likelihood (ML) and Bayesian inference (BI) for the multi-locus analyses. For BI, the best evolutionary model for each partition was determined using MrModeltest v. 2.3 (Nylander 2004) and incorporated into the analyses. ML and BI were run on the CIPRES Science Gateway portal (https://www.phylo.org/) (Miller et al. 2012) using RaxML-HPC2 on XSEDE v. 8.2.12 (Stamatakis 2014) and MrBayes on XSEDE v. 3.2.7a (Huelsenbeck and Ronquist 2001; Ronquist and Huelsenbeck 2003; Ronquist et al. 2012), respectively. Four Markov chains were run for two runs from random starting trees for 10,000,000 generations (ITS + tub2 + tef1) until the split deviation frequency value < 0.01, and trees were sampled every 1000 generation. The first quarter generations were discarded as burn-in. A majority rule consensus tree of all remaining trees was calculated. The resulting trees were plotted using FigTree v. 1.4.4 (http://tree.bio.ed.ac.uk/software/figtree) and edited with Adobe Illustrator CC 2019. New sequences generated in this study were deposited at GenBank (https://www.ncbi.nlm.nih.gov; Table 1). The final concatenated sequence alignments were deposited in TreeBase (http://purl.org/phylo/treebase/phylows/study/TB2:S29480).Species and GenBank accession numbers of DNA sequences used in this study. New sequences are in bold.Isolates marked with “T” are ex-type or ex-epitype strains.
Result
Phylogenetic analyses
Nine strains of isolated from plant hosts from Hainan, China, were grown in culture and used for analyses of molecular sequence data. The combined dataset of ITS-tub2-tef1 has an aligned length of 2285 total characters (ITS: 1–638, tub2: 639–1558, tef1: 1559–2285) including gaps, of which 869 characters are constant, 292 variable and parsimony-uninformative, and 1124 parsimony-informative. For the BI and ML analyses, the substitution model GTR+G for ITS, HKY+I+G for tub2 and GTR+I+G for tef1 were selected and incorporated into the analyses. The MCMC analysis of the three concatenated genes run for 7,795,000 generations, resulting in 7796 trees. The ML tree topology confirmed the tree topologies obtained from the BI analyses, and therefore, only the ML tree is presented (Fig. 1).
Figure 1.
Phylogram of based on combined ITS, tub2 and tef1 sequences. The BI and ML bootstrap support values above 0.90 and 70% are shown at the first and second position, respectively. The tree is rooted to (CBS 122705), ex-type or ex-epitype cultures are indicated in bold face. Strains from the current study are in red. Some branches were shortened according to the indicated mulipliers.
Phylogram of based on combined ITS, tub2 and tef1 sequences. The BI and ML bootstrap support values above 0.90 and 70% are shown at the first and second position, respectively. The tree is rooted to (CBS 122705), ex-type or ex-epitype cultures are indicated in bold face. Strains from the current study are in red. Some branches were shortened according to the indicated mulipliers.Bayesian posterior probability (≥ 0.90) and ML bootstrap support values (≥ 70%) are shown as first and second position above nodes. The 96 strains were assigned to 75 species clades based on the three gene loci phylogeny (Fig. 1). Based on the multi-locus phylogeny and morphology, nine isolates were assigned to four species, including sp. nov., sp. nov., and .
Taxonomy
Z. X. Zhang, J. W. Xia & X. G. Zhang
sp. nov.5ACD3395-C104-58D5-8EC2-53136E31A7FEMycoBank No: 841381Fig. 2
Figure 2.
(SAUCC212201, ex-type) a diseased leaf of b surface of colony after 15 days on PDAc reverse of colony after 15 days on PDAd conidiomata e, f conidiogenous cells with conidia g–j conidia. Scale bars: 10 μm (e–j).
Type.
China, Hainan Province: East Harbour National Nature Reserve, on diseased leaves of , 23 May 2021, Z.X. Zhang (holotype HSAUP212201; ex-type living culture SAUCC212201).(SAUCC212201, ex-type) a diseased leaf of b surface of colony after 15 days on PDAc reverse of colony after 15 days on PDAd conidiomata e, f conidiogenous cells with conidia g–j conidia. Scale bars: 10 μm (e–j).
Etymology.
Name refers to the genus of the host plant .
Description.
Leaf spots irregular, pale brown in centre, brown to tan at margin. Sexual morph not observed. Asexual morph on PDA: Conidiomata solitary, scattered, black, raising above surface of culture medium, subglobose, exuding black conidial droplets from central ostioles after 10 days in light at 25 °C. Conidiophores cylindrical, hyaline, smooth-walled. Conidiogenous cells 9.0–16.5 × 1.2–2.2 μm, phialidic, ampulliform, discrete, hyaline, smooth, thin-walled. Conidia 18–24 × 4.5–6.0 μm, mean ± SD = 20.5 ± 1.1 × 5.5 ± 0.4 μm, fusiform, tapering at both ends, 4-septate; apical cell 2.0–4.0 μm long, conical, hyaline and smooth-walled; three median cells doliiform, 12.5–15.5 μm long, mean ± SD = 14.2 ± 0.7 μm, olivaceous, rough-walled, upper second cell 3.8–5.3 μm long, upper third cell 3.4–5.0 μm long, upper fourth cell 4.4–5.4 μm long; basal cell 2.2–4.5 μm long, conical, hyaline and smooth-walled; apical appendage 7.0–12.5 μm long (mean = 9.2 μm), single, unbranched, central, tubular, filiform; basal appendage 2.5–5.0 μm long, single, unbranched tubular, filiform.
Culture characteristics.
Colonies on PDA 39.0–45.0 mm in diameter after 15 days at 25 °C in darkness, growth rate 2.5–3.0 mm/day, irregularly circular, raised, dense surface with lobate edge, zonate in different sectors, light brown at the margin, brown at the centre; reverse brown at the margin, dark brown at the centre.
Additional specimen examined.
China, Hainan Province: East Harbour National Nature Reserve, 23 May 2021, Z.X. Zhang. On diseased leaves of , paratype HSAUP212202, living culture SAUCC212202; on diseased leaves of , paratype HSAUP212203, living culture SAUCC212203.
Notes.
is introduced based on the multi-locus phylogenetic analysis, with three isolates clustering separately in a well-supported clade (BI/ML = 0.99/96). is phylogenetically close to from leaves of , from leaves of sp., and from twigs of . However, differs from by 148 nucleotides (11/463 in ITS, 89/743 in tub2 and 48/403 in tef1), from by 94 nucleotides (18/526 in ITS, 32/698 in tub2 and 44/456 in tef1), and from by 91 nucleotides (10/524 in ITS, 40/411 in tub2 and 41/304 in tef1). Furthermore, they are distinguished by hosts and conidial sizes (18.0–24.0 × 4.5–6.0 μm in vs. 18.8–27.3 × 4.7–6.6 μm in vs. 20.0–27.0 × 5.0–8.0 μm in vs. 22.0–28.0 × 5.0–7.0 μm in ). In morphology, differs from by the colour of colonies (cinnamon vs. brown), differs from by the colour of median cells (brown vs. olivaceous), and differs from by longer conidiogenous cells (10.0–30.0 μm vs. 9.0–16.5 μm) (de Silva et al. 2017; Crous et al. 2018; Jiang et al. 2021b).Z. X. Zhang, J. W. Xia & X. G. Zhang
sp. nov.258515C1-6141-59F9-8114-3C1274776E97MycoBank No: 841382Fig. 3
Figure 3.
(SAUCC212271, ex-type) a diseased leaf of b surface of colony after 7 days on PDAc reverse of colony after 7 days on PDAd conidiomata e–g conidiogenous cells with conidia h–j conidia. Scale bars: 10 μm (e–j).
China, Hainan Province, Haikou City: East Harbour National Nature Reserve, on diseased leaves of . 23 May 2021, Z.X. Zhang (holotype HSAUP212271; ex-type living culture SAUCC212271).(SAUCC212271, ex-type) a diseased leaf of b surface of colony after 7 days on PDAc reverse of colony after 7 days on PDAd conidiomata e–g conidiogenous cells with conidia h–j conidia. Scale bars: 10 μm (e–j).Named after the host location, Haikou City.Leaf spots irregular, grey white in centre, brown to tan at margin. Sexual morph not observed. Asexual morph on PDA: Conidiomata globose to clavate, solitary or confluent, embedded or semi-immersed to erumpent, dark brown, exuding globose, dark brown to black conidial masses. Conidiophores indistinct, often reduced to conidiogenous cells. Conidiogenous cells discrete, subcylindrical to ampulliform, hyaline, 5.0–10.0 × 2.0–6.0 μm, apex 1.0–2.0 μm diam. Conidia fusoid, ellipsoid, straight to slightly curved, 4-septate, 16.0–22.0 × 4.5–7.0 μm, mean ± SD = 20.0 ± 1.8 × 5.5 ± 0.4 μm; basal cell conical with a truncate base, hyaline, rugose and thin-walled, 3.0–4.5 μm long; three median cells doliiform, 11.5–15.0 μm long, mean ± SD = 13.2 ± 1.0 μm, wall rugose, septa darker than the rest of the cell, second cell from the base pale brown, 3.5–5.5 μm long; third cell honey-brown, 4.0–6.0 μm long; fourth cell brown, 3.8–5.7 μm long; apical cell 2.5–5.5 μm long, hyaline, cylindrical to subcylindrical, thin- and smooth-walled; with 2–3 tubular apical appendages (mostly 3), arising from the apical crest, unbranched, filiform, 13.5–24.0 μm long, mean ± SD = 19.1 ± 3.5 μm; basal appendage 2.0–7.0 μm long, single, tubular, unbranched, centric.Colonies on PDA occupying an entire 90 mm petri dish in 7 days at 25 °C in darkness, growth rate of 7.0–14.0 mm/day, edge undulate, white to grey white, with moderate aerial mycelium on the surface, with black, gregarious conidiomata; reverse similar in colour.China, Hainan Province: East Harbour National Nature Reserve, 23 May 2021, Z.X. Zhang. On diseased leaves of , paratype HSAUP212272, living culture SAUCC212272.Phylogenetic analysis of a combined three-gene ITS-tub2-tef1 showed that formed an independent clade with full-supported (BI/ML = 1/100, Fig. 1) and is phylogenetically distinct from (MFLUCC 15-0152), (CBS 362.72) and (CFCC 54338). can be distinguished from the phylogenetically most closely related species by narrower conidia (4.5–7.0 vs. 7.5–9.5 μm), by smaller conidia (16.0–22.0 × 4.5–7.0 vs. 20.0–29.0 × 7.5–9.5 μm), and by shorter conidia (16.0–22.0 vs. 23.2–32.8 μm). Furthermore, some species were reported from the same host genus , including , , and . After comparison, was closest to in morphology, but with 78/588 differences in the ITS region (Maharachch. et al. 2014; Liu et al. 2019; Jiang et al. 2021b).S.S.N. Maharachch., K.D. Hyde & P.W. Crous, Studies in Mycology 79:146. (2014)6B8AB555-F733-5E02-8311-780850EB95F6Fig. 4
Figure 4.
(SAUCC210112) a diseased leaf of b surface of colony after 7 days on PDAc reverse of colony after 7 days on PDAd conidiomata e–g conidiogenous cells with conidia h–j conidia. Scale bars: 10 μm (e–j).
Leaf spots irregular, pale brown in centre, brown to tan at margin. Asexual morph on PDA: Conidiomata solitary, globose to clavate, semi-immersed, brown to black; exuding globose, dark brown to black conidial masses. Conidiophores reduced to conidiogenous cells. Conidiogenous cells discrete, ampulliform to lageniform, hyaline, smooth and thin walled, simple, 4.0–12.0 × 2.0–10.0 μm, apex 2.0–5.0 μm diam. Conidia ellipsoid to clavate, straight to slightly curved, 4-septate, 19.5–26.5 × 5.5–7.0 μm, mean ± SD = 22.7 ± 0.8 × 6.1 ± 0.4 μm; somewhat constricted at septa; basal cell obconic with truncate base, rugose and thin-walled, 2.7–5.0 μm long; three median cells 12.0–16.0 μm long, mean ± SD = 14.7 ± 0.9 μm, doliiform, verruculose, versicoloured, septa darker than the rest of the cell, second cell from base pale brown, 4.0–5.7 μm long; third cell dark brown, 3.5–5.2 μm long; fourth cell brown, 3.8–5.8 μm long; apical cell obconic, hyaline, thin and smooth-walled, 2.5–5.2 μm long; with 1–3 tubular apical appendages, arising from the apical crest, flexuous, unbranched, 21.0–32.0 μm long, mean ± SD = 24.8 ± 3.5 μm; basal appendage single, tubular, unbranched, centric, 2.7–6.5 μm long.(SAUCC210112) a diseased leaf of b surface of colony after 7 days on PDAc reverse of colony after 7 days on PDAd conidiomata e–g conidiogenous cells with conidia h–j conidia. Scale bars: 10 μm (e–j).Colonies on PDA incubated at 25 °C in the dark with an average radial growth rate of 9.0–14.0 mm/day and occupying an entire 90 mm petri dish in 7 d, with edge undulate, whitish, aerial mycelium on surface, fruiting bodies black, concentric; reverse of culture yellow to pale brown.
Specimen examined.
China, Hainan Province: Five Fingers Group Scenic Area, 20 May 2021, Z.X. Zhang. On diseased leaves of , HSAUP210112, living culture SAUCC210112; on diseased leaves of , HSAUP210113, living culture SAUCC210113.In the present study, two strains (SAUCC210112 and SAUCC210113) from symptomatic leaves of were clustered with clade (Maharachch. et al. 2014) based on phylogeny (Fig. 1). Morphologically, our strains were the same as , which was originally described with an asexual morph on wood of sp., and fruit of . The sexual morph of was undetermined yet. was a new record for China and first reported from ().K. Geng, Y. Song, K.D. Hyde & Yong Wang bis, Phytotaxa 88 (3):51. (2013)CE5D32D9-599D-5EF1-BF8F-16BB35C4CE4FFig. 5
Figure 5.
(SAUCC210087) a diseased leaf of b surface of colony after 7 days on PDAc reverse of colony after 7 days on PDAd conidiomata f, g, j, k conidiogenous cells with conidia e, h, i, l, m conidia. Scale bars: 10 μm (e–m).
Leaf spots irregular, pale brown in centre, brown to tan at margin. Asexual morph on PDA: Conidiomata solitary, scattered, black, raising above surface of culture medium, subglobose. Conidiophores cylindrical, hyaline, smooth-walled. Conidiophores often indistinct. Conidiogenous cells discrete, hyaline, simple, filiform, 5.5–10.0 μm long. Conidia 18.0–24.5 × 4.0–5.5 μm, mean ± SD = 20.5 ± 1.9 × 5.3 ± 0.3 μm, fusiform, straight to slightly curved, 4-septate, smooth, greyish brown; basal cell conical, hyaline, thin-walled, 2.8–6.0 μm long; with three median cells, dark brown, concolorous, septa and periclinal walls darker than the rest of the cell, together 11.5–16.0 μm long, mean ± SD = 13.2 ± 1.2 μm; second cell from base 3.4–5.5 μm; third cell 3.3–4.7 μm; fourth cell 3.5–5.1 μm; apical cell hyaline, conic to subcylindrical, 3.1–5.3 μm; with 1–3 tubular apical appendages (mostly 1) without knobs, arising from the apex of the apical cell, 10.0–20.5 μm long, mean ± SD = 16.0 ± 4.0 μm; basal appendage filiform, short.(SAUCC210087) a diseased leaf of b surface of colony after 7 days on PDAc reverse of colony after 7 days on PDAd conidiomata f, g, j, k conidiogenous cells with conidia e, h, i, l, m conidia. Scale bars: 10 μm (e–m).Colonies on PDA reaching 70.0–80.0 mm diam after 7 d at 25 °C, growth rate 9.0–12.0 mm/day, edge entire, whitish to pale honey coloured, with sparse aerial mycelium on the surface, with black, gregarious conidiomata; reverse similar in colour.China, Hainan Province: East Harbour National Nature Reserve, 23 May 2021, Z.X. Zhang. On diseased leaves of , HSAUP210087, living culture SAUCC210087; on diseased leaves of , HSAUP210088, living culture SAUCC210088.In the present study, two strains (SAUCC210087 and SAUCC210088) from symptomatic leaves of were clustered to clade (Geng et al. 2013) based on phylogeny (Fig. 1). Morphologically, our strains were the same as , which was originally described with an asexual morph on leaves of in China. The sexual morph of was undetermined yet. This is the first time this species has been reported in () in China.
Discussion
Based on phylogeny and morphology, nine strains from three host species (, and ) were described as well as two new species ( sp. nov. and sp. nov.) and two known species ( and ). In the genus , most species were found on hosts, including (), (), () and etc. In our study, the species of () was first reported from (). was widely grown as an evergreen tree all over the world and isolated many pathogens, endophytes or saprophytes (Alfieri et al. 1984; Maharachch. et al. 2014; de Silva et al. 2017; Solarte et al. 2018). More than 100 strains () have been isolated from the genus . Among these, there was 13 pestalotia-like fungi, and we compare morphology with my new collection. In morphology, the conidia size of is similar to . Phylogenetic analyses of Maharachch. et al. (2014) and the current study show and are different genus. The known species was described from sp. () in United Kingdom (Maharachch. et al. 2014) and was described from () in China (Geng et al. 2013). In this study, was a new record for China and first reported from (), was first reported from () in China, so we described and illustrated and again. Species in genera have multi-septate and more or less fusiform conidia with a single apical and basal appendage (, ); other genera do not form appendages () or have 2–4 appendages (, , , ) (Maharachch. et al. 2014; Bonthond et al. 2018; Liu et al. 2019). Our study supported this phenomenon.As many pestalotioid species have overlapping morphological traits, sequence data is essential to resolve these three genera and introduce new species (Jeewon et al. 2002; de Silva et al. 2017; Norphanphoun et al. 2019). Combined gene sequences of ITS, tub2 and tef1 can provide a better resolution for . However, more genes are needed to provide better resolution and support in . In the previous studies, members of are of particular interest with regard to the production of secondary metabolites, e.g. , and (Collado et al. 2006; Gangadevi and Muthumary 2008; Liu et al. 2009). was shown to possess a very high number of gene clusters involved in bioactive compound synthesis (Wang et al. 2016). Owing to and other genus in this family sharing the same evolutionary history, it is important to report novel species and screen for novel metabolites in future studies.
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