Literature DB >> 35582704

Detection of SARS-CoV-2 in COVID-19 Patient Nasal Swab Samples Using Signal Processing.

Mahmoud Al Ahmad1,2, Lillian J A Olule1, Mohammed Meetani3, Farrukh Amin Sheikh4, Rahima Al Blooshi4, Neena G Panicker5, Farah Mustafa6,2, Tahir A Rizvi7,2.   

Abstract

This work presents an opto-electrical method that measures the viral nucleocapsid protein and anti-N antibody interactions to differentiate between SARS-CoV-2 negative and positive nasal swab samples. Upon light exposure of the patient nasal swab sample mixed with the anti-N antibody, charge transfer (CT) transitions within the altered protein folds are initiated between the charged amino acids side chain moieties and the peptide backbone that play the role of donor and acceptor groups. A Figure of Merit (FOM) was introduced to correlate the relative variations of the samples with and without antibody at two different voltages. Empirically, SARS-CoV-2 in patient nasal swab samples was detected within two minutes, if an extracted FOM threshold of >1 was achieved; otherwise, the sample wasconsidered negative.

Entities:  

Keywords:  COVID-19; SARS-CoV-2; light intensity; nucleocapsid protein; optical detection

Year:  2021        PMID: 35582704      PMCID: PMC9088791          DOI: 10.1109/JSTSP.2021.3134073

Source DB:  PubMed          Journal:  IEEE J Sel Top Signal Process        ISSN: 1932-4553            Impact factor:   7.695


  52 in total

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Review 7.  CRISPR-based tools: Alternative methods for the diagnosis of COVID-19.

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8.  Characterization of spike glycoprotein of SARS-CoV-2 on virus entry and its immune cross-reactivity with SARS-CoV.

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Journal:  Nat Commun       Date:  2020-03-27       Impact factor: 14.919

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10.  Rapid Detection of COVID-19 Causative Virus (SARS-CoV-2) in Human Nasopharyngeal Swab Specimens Using Field-Effect Transistor-Based Biosensor.

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Journal:  ACS Nano       Date:  2020-04-20       Impact factor: 15.881

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