| Literature DB >> 35582230 |
Bao-Jie Zhang1, Deng Chen1, Frank J Dekker1, Wim J Quax1.
Abstract
Epigenetic regulation refers to alterations to the chromatin template that collectively establish differential patterns of gene transcription. Post-translational modifications of the histones play a key role in epigenetic regulation of gene transcription. In this review, we provide an overview of recent studies on the role of histone modifications in carcinogenesis. Since tumour-selective ligands such as tumor necrosis factor-related apoptosis-inducing ligand (TRAIL) are well-considered as promising anti-tumour therapies, we summarise strategies for improving TRAIL sensitivity by inhibiting aberrant histone modifications in cancers. In this perspective we also discuss new epigenetic drug targets for enhancing TRAIL-mediated apoptosis.Entities:
Keywords: Epigenetics; apoptosis; histone modification; selective epigenetic inhibitors; tumor necrosis factor-related apoptosis-inducing ligand
Year: 2020 PMID: 35582230 PMCID: PMC8992553 DOI: 10.20517/cdr.2020.58
Source DB: PubMed Journal: Cancer Drug Resist ISSN: 2578-532X
Histone modifications
| Amino acids | Modifications | Positions | Nomenclature | Ref. |
|---|---|---|---|---|
| Arginine | Methylation | *H3R2/R8/R17/R26, H4R3, H2AR3 | R-me1, R-me2s, R-me2a | [ |
| Citullination | *H3R2/R8/R17/R26/R42, H4R3, H2A, and H1 | R-citrulline | [ | |
| Lysine | Methylation | *H3K9/K4/K36/K79/K27, H4K5/K20 | K-me1, K-me2, K-me3 | [ |
| Acetylation | *H3K9/K14/K56, H4K5/K12/K16 | K-acetyl | [ | |
| Propionylation | *H3K14 | K-propionyl | [ | |
| Butyrylation | *H3K14, H4K5/K8 | K-butyryl | [ | |
| 2-hydroxyisobutyrylation | H2AK5/9/36/74/75/95/118, H2BK5/12/20/23/24/34/43/46/57/85/108/116/120,
| K-2-hydroxyisobutyryl | [ | |
| Malonylation | *H2AK119 | K-malonyl | [ | |
| Succinylation | *H3K79 | K-succinyl | [ | |
| Crotonylation | H2AK36/118/119/125, H2BK5/11/12/15/16/20/23/34
| K-crotonyl | [ |
*Specific positions which were identified to have certain effects in nuclear processes
Figure 1Acetylation or deacetylation of histone lysine residues is catalysed by HATs and HDACs, respectively. Lysine acetylation is connected to loosening of the chromatin structure. This change enables DNA binding and eventually leads to activation of gene transcription. In contrast, deacetylation closes the chromatin structure and represses gene transcription. HATs: histone acetyltransferases; HDACs: histone deacetylases
Inhibitors of histone methylation in clinical studies
| Name | Type of histone modification | Target | Clinical phase | Condition or disease in clinic | Disease in preclinical studies |
|---|---|---|---|---|---|
| Pinometostat
| Lysine methylation | DOT1L | 1 | Advanced acute leukemia, particularly MLL-r[ | Rearranged mixed lineage leukemia (MLL-r)[ |
| CPI-1205 | EZH2 | 1 | B-cell lymphomas[ | B-cell lymphomas[ | |
| Tazemetostat
| 2 | Elapsed or refractory B-cell non-Hodgkin lymphoma and advanced solid tumours[ | Non-Hodgkin lymphoma[ | ||
| GSK2879552 | LSD1 | 1 | Relapsed or refractory SCLC[ | Small cell lung carcinoma[ | |
| JNJ-64619178 | Arginine methylation | PRMT5 | 1 | Relapsed/refractory B cell non-Hodgkin lymphoma (NHL) or advanced solid tumours | Human NSCLC and SCLC cancer mouse xenograft models[ |
| GSK3326595
| PRMT5 | 1 | Advanced or metastatic solid tumours and non-Hodgkin’s lymphoma[ | Hematologic and solid tumour cells lines[ | |
| GSK3368715
| Type I PRMTs | 1 | Solid tumours and diffuse large B-cell lymphoma | Lymphoma and AML cell lines[ |
SCLC: small cell lung cancer; NSCLC: non-small-cell lung carcinoma; AML: acute myeloid leukemia
Specific HAT and HDAC inhibitors developed between 2009 and 2019, and their applications in cancer in vitro
| Name | Target | Links to cancer |
|---|---|---|
| BG45 | Class I HDAC | multiple myeloma[ |
| TMP-195 | Class IIa HDAC | Breast tumour[ |
| LMK235 | HDAC4,5 | Chemoresistant cancer cells[ |
| Tubastatin A | HDAC6 | cholangiocarcinoma[ |
| Ricolinostat (ACY-1215) | multiple myeloma[ | |
| SKLB-23bb | solid and hematologic tumour[ | |
| Cay 10603 | Burkitt’s lymphoma[ | |
| Nexturastat A | myeloma[ | |
| PCI-34051 | HDAC8 | neuroblastoma[ |
| A485 | P300/CBP | myeloma[ |
HAT: histone acetyltransferase; HDAC: histone deacetylase
Figure 2TRAIL-induced apoptotic pathways. After trimerization, TRAIL binds to death receptors, which triggers the formation of the DISC and activates caspase-8/10. Subsequently, activated caspase-8/10 induces cleavage of caspase-3/7, which leads to apoptosis. On the other hand, cleaved caspase-8/10 can also recruit Bid to trigger apoptosis via the intrinsic pathways. The intrinsic pathway is usually activated by DNA damage followed by p53 activation, whereas TRAIL-induced intrinsic apoptotic pathway is independent of p53. Interestingly, p53 has also been found to regulate TRAIL receptors DR4, DR5, DcR1, and DcR2[. Anti-apoptotic proteins, including c-FLIP, c-IAP1/2, Bcl-2, Bfl-1, Mcl-1, Bcl-XL, XIAP, and survivin, are shown in blue circles. DISC: death-inducing signalling complex; DR4: death receptor 4; DR4: death receptor 5; DcR1: decoy receptor 1; DcR2: decoy receptor 2
Improved TRAIL-induced apoptosis pathway using inhibitors targeting enzymes in histone modifications
| Target | Small molecule | Regulation mechanisms | Cancer type | Ref. |
|---|---|---|---|---|
| Euchromatic histone-lysine | BIX-01294 | Downregulation of Survivin and Upregulation of DR5 | Renal carcinoma | [ |
| Upregulation of DR5 | Breast cancer | [ | ||
| PRC2 | Retinoic acid (RA) or 3-deazaneplanocin A (DZNep) | Increased DR5 transcript level | Colon cancer | [ |
| Class I HDAC | Entinostat
| Restore expression of Coxsackie Adenovirus receptor | Prostate cancer | [ |
| Upregulation of DR4, DR5, Bax, Bak | Breast cancer | [ | ||
| Decrease degradation of endogenous TRAIL | Anaplastic thyroid carcinoma | [ | ||
| Expression of endogenous TRAIL | Acute myeloid leukemia | [ | ||
| HDAC3 | RGFP966 | Upregulation of DR4 | Colon cancer | [ |
| HDAC8 | PCI34051 |