Literature DB >> 35582203

Flex Printed Circuit Board Implemented Graphene-Based DNA Sensor for Detection of SARS-CoV-2.

Samar Damiati1,2, Sindre Sopstad3, Martin Peacock4, Ahmad S Akhtar5, Ines Pinto5, Ruben R G Soares5, Aman Russom5.   

Abstract

Since the COVID-19 outbreak was declared a pandemic by the World Health Organization (WHO) in March 2020, ongoing efforts have been made to develop sensitive diagnostic platforms. Detection of viral RNA provides the highest sensitivity and specificity for detection of early and asymptomatic infections. Thus, this work aimed at developing a label-free genosensor composed of graphene as a working electrode that could be embedded into a flex printed circuit board (FPCB) for the rapid, sensitive, amplification-free and label-free detection of SARS-CoV-2. To facilitate liquid handling and ease of use, the developed biosensor was embedded with a user-friendly reservoir chamber. As a proof-of-concept, detection of a synthetic DNA strand matching the sequence of ORF1ab was performed as a two-step strategy involving the immobilization of a biotinylated complementary sequence on a streptavidin-modified surface, followed by hybridization with the target sequence recorded by the differential pulse voltammetric (DPV) technique in the presence of a ferro/ferricyanide redox couple. The effective design of the sensing platform improved its selectivity and sensitivity and allowed DNA quantification ranging from 100 fg/mL to [Formula: see text]/mL. Combining the electrochemical technique with FPCB enabled rapid detection of the target sequence using a small volume of the sample (5-[Formula: see text]). We achieved a limit-of-detection of 100 fg/mL, whereas the predicted value was ~33 fg/mL, equivalent to approximately [Formula: see text] copies/mL and comparable to sensitivities provided by isothermal nucleic acid amplification tests. We believe that the developed approach proves the ability of an FPCB-implemented DNA sensor to act as a potentially simpler and more affordable diagnostic assay for viral infections in Point-Of-Care (POC) applications.

Entities:  

Keywords:  DNA; SARS-CoV-2; flex printed circuit board (FPCB); graphene; streptavidin–biotin complex

Year:  2021        PMID: 35582203      PMCID: PMC8864937          DOI: 10.1109/JSEN.2021.3068922

Source DB:  PubMed          Journal:  IEEE Sens J        ISSN: 1530-437X            Impact factor:   3.301


  16 in total

1.  Direct molecular level measurements of the electrostatic properties of a protein surface.

Authors:  S Sivasankar; S Subramaniam; D Leckband
Journal:  Proc Natl Acad Sci U S A       Date:  1998-10-27       Impact factor: 11.205

2.  A PNA-based Lab-on-PCB diagnostic platform for rapid and high sensitivity DNA quantification.

Authors:  Pawan Jolly; Joshua Rainbow; Anna Regoutz; Pedro Estrela; Despina Moschou
Journal:  Biosens Bioelectron       Date:  2018-09-06       Impact factor: 10.618

3.  A model for Structure and Thermodynamics of ssDNA and dsDNA Near a Surface: a Coarse Grained Approach.

Authors:  J Ambia-Garrido; Arnold Vainrub; B Montgomery Pettitt
Journal:  Comput Phys Commun       Date:  2010-12-01       Impact factor: 4.390

4.  Optimization of label-free DNA detection with electrochemical impedance spectroscopy using PNA probes.

Authors:  Simon D Keighley; Pedro Estrela; Peng Li; Piero Migliorato
Journal:  Biosens Bioelectron       Date:  2008-08-05       Impact factor: 10.618

5.  How the biotin-streptavidin interaction was made even stronger: investigation via crystallography and a chimaeric tetramer.

Authors:  Claire E Chivers; Apurba L Koner; Edward D Lowe; Mark Howarth
Journal:  Biochem J       Date:  2011-04-01       Impact factor: 3.857

6.  An electrochemical method for sensitive and rapid detection of FAM134B protein in colon cancer samples.

Authors:  Farhadul Islam; Md Hakimul Haque; Sharda Yadav; Md Nazmul Islam; Vinod Gopalan; Nam-Trung Nguyen; Alfred K Lam; Muhammad J A Shiddiky
Journal:  Sci Rep       Date:  2017-03-09       Impact factor: 4.379

7.  Label-Free Sensors Based on Graphene Field-Effect Transistors for the Detection of Human Chorionic Gonadotropin Cancer Risk Biomarker.

Authors:  Carrie Haslam; Samar Damiati; Toby Whitley; Paul Davey; Emmanuel Ifeachor; Shakil A Awan
Journal:  Diagnostics (Basel)       Date:  2018-01-08

Review 8.  Electrochemical detection of viruses and antibodies: A mini review.

Authors:  Miren Ruiz de Eguilaz; Loanda R Cumba; Robert J Forster
Journal:  Electrochem commun       Date:  2020-05-26       Impact factor: 4.724

Review 9.  Electrochemical Biosensors Based on S-Layer Proteins.

Authors:  Samar Damiati; Bernhard Schuster
Journal:  Sensors (Basel)       Date:  2020-03-19       Impact factor: 3.576

10.  Rapid Detection of COVID-19 Causative Virus (SARS-CoV-2) in Human Nasopharyngeal Swab Specimens Using Field-Effect Transistor-Based Biosensor.

Authors:  Giwan Seo; Geonhee Lee; Mi Jeong Kim; Seung-Hwa Baek; Minsuk Choi; Keun Bon Ku; Chang-Seop Lee; Sangmi Jun; Daeui Park; Hong Gi Kim; Seong-Jun Kim; Jeong-O Lee; Bum Tae Kim; Edmond Changkyun Park; Seung Il Kim
Journal:  ACS Nano       Date:  2020-04-20       Impact factor: 15.881

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  3 in total

1.  Electrochemical Biosensor for SARS-CoV-2 cDNA Detection Using AuPs-Modified 3D-Printed Graphene Electrodes.

Authors:  Luiz R G Silva; Jéssica S Stefano; Luiz O Orzari; Laís C Brazaca; Emanuel Carrilho; Luiz H Marcolino-Junior; Marcio F Bergamini; Rodrigo A A Munoz; Bruno C Janegitz
Journal:  Biosensors (Basel)       Date:  2022-08-10

Review 2.  Recent Progresses in Electrochemical DNA Biosensors for SARS-CoV-2 Detection.

Authors:  Yanqiu Mei; Xiaofeng Lin; Chen He; Weijia Zeng; Yan Luo; Chenghao Liu; Zhehao Liu; Min Yang; Ying Kuang; Qitong Huang
Journal:  Front Bioeng Biotechnol       Date:  2022-07-15

Review 3.  The role of electrochemical biosensors in SARS-CoV-2 detection: a bibliometrics-based analysis and review.

Authors:  Shudan Mao; Li Fu; Chengliang Yin; Xiaozhu Liu; Hassan Karimi-Maleh
Journal:  RSC Adv       Date:  2022-08-12       Impact factor: 4.036

  3 in total

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