| Literature DB >> 35574300 |
Chenglu Huang1, Suqin Xu2, Zhilin Luo1, Dong Li1, Rui Wang1, Tianhu Wang1.
Abstract
Background: Matrix metalloproteinases (MMPs), a kind of proteases, have a critical function in cancer occurrence, invasion, and migration. MMP gene variants (e.g., MMP-2, MMP-7, and MMP-9) can affect the biological functions of these enzymes and lead to the occurrence and progression of cancer, which has become a hot topic in recent years, but the corresponding results are still controversial. In this context, here, the meta-analysis was conducted for assessing the relations of variants in MMP-2, MMP-7, and MMP-9 with the risk of various cancers.Entities:
Keywords: cancer; gene; matrix metalloproteinases; meta-analysis; variant
Year: 2022 PMID: 35574300 PMCID: PMC9095957 DOI: 10.3389/fonc.2022.856831
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 5.738
Figure 1Flow diagram of search strategy and study selection.
Significant associations between variants in the MMP-2, MMP-7, and MMP-9 and cancer risk.
| Gene | Variant | Alleles | Cancer site | Ethnicity | MAF | Number evaluation | Risk of Meta-Analysis | Venice criteria | FPRP values | Credibility of evidence | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Studies | Sample size (cases/controls) | Genetic models | Effect model | OR (95% CI) |
|
| PQ | |||||||||
| MMP2 | rs243865 | TvsC | Esophageal | Asian | 0.1565 | 4 | 2,850 (1,157/1,693) | Allelic | Fixed | 0.751 (0.643–0.877) | <0.001 | 41.4 | 0.163 | BBA | 0.006 | Strong |
| MMP2 | rs243865 | TvsC | Esophageal | Asian | 0.1565 | 4 | 2,850 (1,157/1,693) | Dominant | Fixed | 0.723 (0.607–0.862) | <0.001 | 46.9 | 0.13 | BBA | 0.007 | Strong |
| MMP2 | rs243865 | TvsC | Lung | Overall | 0.1679 | 5 | 4,734 (2,199/2,535) | Allelic | Random | 0.654 (0.507–0.844) | 0.001 | 72.1 | 0.006 | ACC | 0.045 | Moderate |
| MMP2 | rs243865 | TvsC | Lung | Overall | 0.1679 | 5 | 4,734 (2,199/2,535) | Dominant | Random | 0.613 (0.457–0.823) | 0.001 | 73.8 | 0.004 | ACC | 0.07 | Weak |
| MMP2 | rs243865 | TvsC | Lung | Asian | 0.1667 | 3 | 4,254 (1,909/2,345) | Allelic | Fixed | 0.534 (0.468–0.610) | <0.001 | 0.0 | 0.837 | AAA | 5.60083E−07 | Strong |
| MMP2 | rs243865 | TvsC | Lung | Asian | 0.1667 | 3 | 4,254 (1,909/2,345) | Dominant | Fixed | 0.484 (0.417–0.561) | <0.001 | 0.0 | 0.864 | AAA | 2.79371E−10 | Strong |
| MMP2 | rs243865 | TvsC | Lung | Asian | 0.1667 | 3 | 4,254 (1,909/2,345) | Recessive | Fixed | 0.616 (0.385–0.985) | 0.043 | 0.0 | 0.944 | CAC | 0.688 | Weak |
| MMP2 | rs243865 | TvsC | Nasopharyngeal | Asian | 0.1083 | 3 | 2,946 (1,381/1,565) | Dominant | Random | 0.686 (0.492–0.957) | 0.026 | 63.0 | 0.067 | BCC | 0.47 | Weak |
| MMP2 | rs243865 | TvsC | Prostate | Overall | 0.2044 | 6 | 1,433 (699/734) | Dominant | Fixed | 1.365 (1.094–1.703) | 0.006 | 7.1 | 0.371 | BAA | 0.122 | Moderate |
| MMP2 | rs243865 | TvsC | Prostate | Asian | 0.1535 | 3 | 732 (341/391) | Allelic | Fixed | 1.480 (1.131–1.936) | 0.004 | 0.0 | 0.868 | BAA | 0.13 | Moderate |
| MMP2 | rs243865 | TvsC | Prostate | Asian | 0.1535 | 3 | 732 (341/391) | Dominant | Fixed | 1.657 (1.207–2.276) | 0.002 | 0.0 | 0.962 | BAA | 0.114 | Moderate |
| MMP7 | rs11568818 | CvsT | Bladder | Overall | 0.291 | 4 | 2,377 (1,169/1,208) | Allelic | Fixed | 1.204 (1.055–1.374) | 0.006 | 0.0 | 0.405 | AAA | 0.1 | Strong |
| MMP7 | rs11568818 | CvsT | Bladder | Overall | 0.291 | 4 | 2,377 (1,169/1,208) | Recessive | Fixed | 1.538 (1.198–1.974) | 0.001 | 0.0 | 0.696 | BAA | 0.032 | Strong |
| MMP7 | rs11568818 | CvsT | Bladder | Asian | 0.2651 | 3 | 1,938 (929/1,009) | Allelic | Fixed | 1.229 (1.056–1.431) | 0.008 | 23.7 | 0.269 | AAA | 0.131 | Strong |
| MMP7 | rs11568818 | CvsT | Bladder | Asian | 0.2651 | 3 | 1,938 (929/1,009) | Recessive | Fixed | 1.560 (1.166–2.087) | 0.003 | 0.0 | 0.494 | BAA | 0.116 | Moderate |
| MMP7 | rs11568818 | CvsT | Cervical | Asian | 0.2896 | 3 | 1,179 (597/582) | Allelic | Fixed | 1.372 (1.148–1.640) | 0.001 | 0.0 | 0.583 | BAA | 0.012 | Strong |
| MMP7 | rs11568818 | CvsT | Cervical | Asian | 0.2896 | 3 | 1,179 (597/582) | Dominant | Fixed | 1.381 (1.088–1.753) | 0.008 | 52.8 | 0.12 | BCC | 0.168 | Weak |
| MMP7 | rs11568818 | CvsT | Cervical | Asian | 0.2896 | 3 | 1,179 (597/582) | Recessive | Fixed | 1.664 (1.175–2.357) | 0.004 | 52.7 | 0.121 | BCA | 0.22 | Weak |
| MMP7 | rs11568818 | CvsT | Colorectal | Asian | 0.1292 | 5 | 2,214 (1,045/1,169) | Allelic | Fixed | 0.771 (0.629–0.945) | 0.012 | 0.0 | 0.566 | BAA | 0.202 | Weak |
| MMP7 | rs11568818 | CvsT | Colorectal | Asian | 0.1292 | 5 | 2,214 (1,045/1,169) | Recessive | Fixed | 0.450 (0.256–0.790) | 0.005 | 12.6 | 0.285 | CAC | 0.546 | Weak |
| MMP9 | rs3918242 | TvsC | Breast | Overall | 0.1967 | 6 | 3,316 (1,656/1,660) | Allelic | Fixed | 1.281 (1.134–1.447) | <0.001 | 29.2 | 0.216 | AAA | 0.001 | Strong |
| MMP9 | rs3918242 | TvsC | Breast | Overall | 0.1967 | 6 | 3,316 (1,656/1,660) | Dominant | Fixed | 1.236 (1.065–1.434) | 0.005 | 21.8 | 0.27 | AAC | 0.09 | Weak |
| MMP9 | rs3918242 | TvsC | Breast | Overall | 0.1967 | 6 | 3,316 (1,656/1,660) | Recessive | Fixed | 1.681 (1.279–2.209) | <0.001 | 0.0 | 0.723 | BAA | 0.017 | Strong |
| MMP9 | rs3918242 | TvsC | Breast | Asian | 0.3042 | 3 | 1,196 (601/595) | Allelic | Fixed | 1.501 (1.263–1.785) | <0.001 | 0.0 | 0.731 | BAC | 0.0002 | Moderate |
| MMP9 | rs3918242 | TvsC | Breast | Asian | 0.3042 | 3 | 1,196 (601/595) | Dominant | Fixed | 1.526 (1.207–1.930) | <0.001 | 0.0 | 0.628 | BAA | 0.018 | Strong |
| MMP9 | rs3918242 | TvsC | Breast | Asian | 0.3042 | 3 | 1,196 (601/595) | Recessive | Fixed | 1.710 (1.262–2.317) | 0.001 | 0.0 | 0.917 | BAA | 0.049 | Strong |
| MMP9 | rs3918242 | TvsC | Gastric | Asian | 0.2385 | 3 | 1,128 (539/589) | Recessive | Fixed | 1.612 (1.000–2.598) | 0.05 | 0.0 | 0.551 | CAA | 0.712 | Weak |
| MMP9 | rs3918242 | TvsC | Hepatocellular | Overall | 0.1589 | 3 | 1,280 (657/623) | Recessive | Fixed | 1.973 (1.068–3.645) | 0.03 | 48.1 | 0.165 | CBA | 0.749 | Weak |
| MMP9 | rs3918242 | TvsC | Lung | Overall | 0.141 | 5 | 2,980 (1,539/1,447) | Allelic | Random | 0.754 (0.570–0.999) | 0.049 | 63.3 | 0.028 | BCA | 0.537 | Weak |
| MMP9 | rs3918242 | TvsC | Lung | Overall | 0.141 | 5 | 2,980 (1,539/1,447) | Recessive | Fixed | 0.355 (0.177–0.712) | 0.004 | 42.1 | 0.159 | CCA | 0.639 | Weak |
| MMP9 | rs3918242 | TvsC | Lung | Caucasian | 0.1496 | 3 | 1,890 (1,051/839) | Allelic | Fixed | 0.798 (0.661–0.962) | 0.018 | 0.0 | 0.502 | BAA | 0.276 | Weak |
| MMP9 | rs3918242 | TvsC | Lung | Caucasian | 0.1496 | 3 | 1,890 (1,051/839) | Recessive | Fixed | 0.257 (0.118–0.561) | 0.001 | 0.0 | 0.615 | CAC | 0.595 | Weak |
| MMP9 | rs3918242 | TvsC | Oral | Overall | 0.1406 | 3 | 1,545 (770/775) | Allelic | Fixed | 1.309 (1.078–1.589) | 0.007 | 26.8 | 0.255 | BAA | 0.118 | Moderate |
| MMP9 | rs3918242 | TvsC | Oral | Overall | 0.1406 | 3 | 1,545 (770/775) | Recessive | Fixed | 3.497 (1.812–6.749) | <0.001 | 0.0 | 0.717 | CAA | 0.383 | Weak |
Allelics: minor allelic (bold) vs. major allelic. Venice criteria grades are for amount of evidence, replication of the association, and protection from bias. The prior probability of FPRP is 0.05, and the FPRP level of noteworthiness is 0.20.
C, cytosine; T, thymine; OR, odds ratio; MAF, minor allelic frequency in control; FPRP, false-positive report probability.