Literature DB >> 35572627

Corrigendum: Differences in Bioenergetic Metabolism of Obligately Alkaliphilic Bacillaceae Under High pH Depend on the Aeration Conditions.

Toshitaka Goto1,2, Shinichi Ogami1,2, Kazuaki Yoshimume3, Isao Yumoto1,2.   

Abstract

[This corrects the article DOI: 10.3389/fmicb.2022.842785.].
Copyright © 2022 Goto, Ogami, Yoshimume and Yumoto.

Entities:  

Keywords:  Bacillaceae; Donnan effect; Evansella clarkii; H+ capacitor; alkaliphilic; bioenergetic mechanism; cytochrome c; membrane electrical potential

Year:  2022        PMID: 35572627      PMCID: PMC9097818          DOI: 10.3389/fmicb.2022.903233

Source DB:  PubMed          Journal:  Front Microbiol        ISSN: 1664-302X            Impact factor:   5.640


In the original article, there was a mistake in the legend for Figure 2 as published. It described that “The acid residue-abundant segment of Glu25-Lys46 (Glu6-Lys27 in the processed protein base) in S. cohnii DSM 6307T is indicated by green box” at L2 –L3. The correct legend appears below. Figure 2. Amino acid sequence alignment of membrane bound cytochrome c-550 from Evansella clarkii and other alkaliphilic and neutralophilic Bacillaceae. Asn (N)-rich segment, Asn (N)21-Asn (N)43 [Asn (N)4-Asn (N)26 in the processed protein base] in the E. clarkii cytochromes c is indicated by red box. The acid residue-abundant segment of Glu25-Lys46 (Glu6-Lys27 in the processed protein base) in S. cohnii DSM 6307T is indicated by red box. N-terminal amino acid residue in processed cytochrome c, [Cys (C)] is indicated by blue marker. The blue boxed sequences are heme sequences representing heme-binding site and axical ligands (H and M). Acidic and basic residues are indicated by blue and red letters. Although A. pseudofirmus OF4 is a facultative alkaliphile, the species A. pseudofirmus and the presented cytochrome c sequence are classified in obligate alkaliphile. Although Sporosarcina pasteurii is an obligate alkaliphile, its cytochrome c sequence is similar to those in the facultative alkaliphilic strains. In the original article, there was a mistake in Table 2 as published. The unit for respiratory rate was incorrect. The corrected Table 2 appears below.
Table 2

Summary for high aeration and low aeration in obligate alkaliphilic Evansella clarkii, facultative alkaliphilic Sutcliffiella cohnii, and neutralophilic Bacillussubtilis.

Growth rate (μmax)1 Cytochrome c content (nmol ·mg−1)1 ΔΨ (mV)1,2 Respiratory rate (μmol ·O2 min−1 mg−1)2 H+/O1 Maximum ATP synthesis rate2 (nmol ·min−1 ·mg−1)2
E. clarkii DSM8720TLow aeration0.360.89 ± 0.07−135 ± 8ND0.6 ± 0.1 (6)§ND
E. clarkii DSM 8720THigh aeration0.420.36 ± 0.01−192 ± 30.19 ± 0.042.2 ± 0.2 (6)26.2 ± 1.7
S. cohnii YN-2000High aeration0.380.62 ± 0.01−173 ± 50.20 ± 0.032.6 ± 0.3 (6)9.6 ± 0.9
B. subtilis IAM 1026Low aeration0.260.18 ± 0.06−133 ± 13ND2.8 ± 0.8 (6)ND
B. subtilis IAM 1026High aeration0.550.21 ± 0.02−121 ± 70.50 ± 0.064.9 ± 0.1 (6)2.0 ± 0.6

These data cited from

Goto (

Goto et al. (.

The numbers in parentheses are based on the theoretically extruded H.

Summary for high aeration and low aeration in obligate alkaliphilic Evansella clarkii, facultative alkaliphilic Sutcliffiella cohnii, and neutralophilic Bacillussubtilis. These data cited from Goto ( Goto et al. (. The numbers in parentheses are based on the theoretically extruded H. The authors apologize for this error and state that this does not change the scientific conclusions of the article in any way. The original article has been updated.

Publisher's Note

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  1 in total

1.  Contribution of intracellular negative ion capacity to Donnan effect across the membrane in alkaliphilic Bacillus spp.

Authors:  Toshitaka Goto; Toshinao Hirabayashi; Hajime Morimoto; Koji Yamazaki; Norio Inoue; Hidetoshi Matsuyama; Isao Yumoto
Journal:  J Bioenerg Biomembr       Date:  2016-01-09       Impact factor: 2.945

  1 in total

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