| Literature DB >> 35572141 |
Hui-Hui Fan1,2, Bao-Qing Li3, Ke-Yun Wu1, Hai-Dan Yan1, Meng-Jie Gu2, Xing-Hao Yao1, Hao-Jia Dong1, Xiong Zhang2, Jian-Hong Zhu1,2.
Abstract
Background: Environmental substances such as pesticides are well-known in link with Parkinson's disease (PD) risk. Enzymes including cytochromes P450 (CYPs), esterases and glutathione S-transferases (GSTs) are responsible for the xenobiotic metabolism and may functionally compensate each other for subtypes in the same class. We hypothesize that the genetic effects of each class modulate PD risk stronger in a synergistic way than individually.Entities:
Keywords: Parkinsion’s disease; genetic association; metabolizing enzymes; polymorphism; synergistic effect
Year: 2022 PMID: 35572141 PMCID: PMC9099289 DOI: 10.3389/fnagi.2022.888942
Source DB: PubMed Journal: Front Aging Neurosci ISSN: 1663-4365 Impact factor: 5.750
Genotype and allele frequencies of polymorphisms of CYPs, esterases and GSTs in PD patients and controls.
| Polymorphism | Genotype (frequency) |
| Allele (frequency) |
| OR (95% CI) | |||
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| Control | 138 (0.277) | 242 (0.485) | 119 (0.238) | 518 (0.519) | 480 (0.481) | |||
| PD | 150 (0.285) | 280 (0.531) | 97 (0.184) | 0.119 | 580 (0.550) | 474 (0.450) | 0.148 | 0.876 (0.732–1.048) |
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| Control | 288 (0.577) | 174 (0.349) | 37 (0.074) | 750 (0.752) | 248 (0.248) | |||
| PD | 328 (0.622) | 177 (0.336) | 22 (0.042) | 0.181 | 833 (0.790) | 221 (0.210) | 0.068 | 0.820 (0.662–1.015) |
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| Control | 66 (0.132) | 232 (0.465) | 201 (0.403) | 364 (0.365) | 634 (0.635) | |||
| PD | 77 (0.146) | 277 (0.526) | 173 (0.328) | 0.080 | 431 (0.409) | 623 (0.591) | 0.043 | 0.827 (0.688–0.994) |
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| Control | 213 (0.427) | 226 (0.453) | 60 (0.120) | 652 (0.653) | 346 (0.347) | |||
| PD | 223 (0.423) | 246 (0.467) | 58 (0.110) | 0.908 | 692 (0.657) | 362 (0.343) | 0.839 | 0.981 (0.812–1.184) |
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| Control | 12 (0.024) | 157 (0.315) | 330 (0.661) | 181 (0.181) | 817 (0.819) | |||
| PD | 9 (0.017) | 152 (0.288) | 366 (0.694) | 0.486 | 170 (0.161) | 884 (0.839) | 0.266 | 1.144 (0.903–1.450) |
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| Control | 60 (0.120) | 235 (0.471) | 204 (0.409) | 355 (0.356) | 643 (0.644) | |||
| PD | 75 (0.142) | 225 (0.427) | 227 (0.431) | 0.404 | 375 (0.356) | 679 (0.644) | 0.943 | 1.007 (0.836–1.213) |
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| Control | 329 (0.659) | 153 (0.307) | 17 (0.034) | 811 (0.813) | 187 (0.187) | |||
| PD | 347 (0.658) | 170 (0.323) | 10 (0.019) | 0.227 | 864 (0.820) | 190 (0.180) | 0.712 | 0.957 (0.760–1.206) |
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| Control | 393 (0.788) | 101 (0.202) | 5 (0.010) | 887 (0.889) | 111 (0.111) | |||
| PD | 417 (0.791) | 105 (0.199) | 5 (0.009) | 0.949 | 939 (0.891) | 115 (0.109) | 0.751 | 0.955 (0.717–1.271) |
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| Control | 279 (0.559) | 220 (0.441) | ||||||
| PD | 270 (0.512) | 257 (0.488) | 0.371 | 1.123 (0.87–1.448) | ||||
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| Control | 258 (0.517) | 241 (0.483) | ||||||
| PD | 295 (0.560) | 232 (0.440) | 0.252 | 0.862 (0.669–1.111) | ||||
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| Control | 343 (0.687) | 141 (0.283) | 15 (0.030) | 827 (0.829) | 171 (0.171) | |||
| PD | 380 (0.721) | 132 (0.250) | 15 (0.028) | 0.323 | 892 (0.846) | 162 (0.154) | 0.135 | 0.831 (0.653–1.059) |
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| Control | 263 (0.527) | 192 (0.385) | 44 (0.088) | 718 (0.719) | 280 (0.281) | |||
| PD | 305 (0.579) | 189 (0.359) | 33 (0.063) | 0.105 | 799 (0.758) | 255 (0.242) | 0.030 | 0.799 (0.651–0.979) |
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| Control | 320 (0.641) | 159 (0.319) | 20 (0.040) | 799 (0.801) | 199 (0.199) | |||
| PD | 333 (0.632) | 174 (0.330) | 20 (0.038) | 0.886 | 840 (0.797) | 214 (0.203) | 0.631 | 1.056 (0.845–1.320) |
CI, confidence interval; CYPs, cytochromes P450; GSTs, glutathione S-transferases; OR, odds ratio; PD, Parkinson’s disease.
Association analyses with PD using dominant, recessive, and additive models.
| Polymorphism | Genotype |
| OR (95% CI) |
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| Dominant | TT vs. TC + CC | 0.68 | 0.94 (0.71–1.25) |
| Recessive | TT + TC vs. CC | 0.04 | 0.72 (0.53–0.99) |
| Additive | TT vs. TC vs. CC | 0.14 | 0.87 (0.73–1.05) |
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| Dominant | TT vs. TC + CC | 0.13 | 0.82 (0.63–1.06) |
| Recessive | TT + TC vs. CC | 0.14 | 0.66 (0.38–1.15) |
| Additive | TT vs. TC vs. CC | 0.071 | 0.82 (0.67–1.02) |
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| Dominant | CC vs. CA + AA | 0.36 | 0.84 (0.58–1.22) |
| Recessive | CC + CA vs. AA | 0.025 | 0.74 (0.57–0.96) |
| Additive | CC vs. CA vs. AA | 0.038 | 0.82 (0.68–0.99) |
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| Dominant | GG vs. GA + AA | 0.72 | 1.05 (0.81–1.35) |
| Recessive | GG + GA vs. AA | 0.9 | 0.97 (0.65–1.45) |
| Additive | GG vs. GA vs. AA | 0.84 | 1.02 (0.84–1.23) |
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| Dominant | GG vs. GC + CC | 0.4 | 1.47 (0.60–3.70) |
| Recessive | GG + GC vs. CC | 0.31 | 1.15 (0.88–1.52) |
| Additive | GG vs. GC vs. CC | 0.25 | 1.15 (0.90–1.47) |
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| Dominant | TT vs. TC + CC | 0.39 | 0.85 (0.58–1.23) |
| Recessive | TT + TC vs. CC | 0.49 | 1.10 (0.85–1.41) |
| Additive | TT vs. TC vs. CC | 0.94 | 1.01 (0.84–1.20) |
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| Dominant | GG vs. GC + CC | 0.9 | 1.02 (0.78–1.33) |
| Recessive | GG + GC vs. CC | 0.094 | 0.50 (0.22–1.14) |
| Additive | GG vs. GC vs. CC | 0.7 | 0.96 (0.75–1.21) |
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| Dominant | CC vs. CT + TT | 0.76 | 0.95 (0.70–1.30) |
| Recessive | CC + CT vs. TT | 0.87 | 0.90 (0.25–3.20) |
| Additive | CC vs. CT vs. TT | 0.75 | 0.95 (0.71–1.27) |
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| Dominant | CC vs. CA + AA | 0.14 | 0.81 (0.61–1.07) |
| Recessive | CC + CA vs. AA | 0.56 | 0.80 (0.38–1.69) |
| Additive | CC vs. CA vs. AA | 0.14 | 0.83 (0.66–1.06) |
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| Dominant | AA vs. AG + GG | 0.049 | 0.77 (0.60–1.00) |
| Recessive | AA + AG vs. GG | 0.16 | 0.71 (0.44–1.15) |
| Additive | AA vs. AG vs. GG | 0.033 | 0.80 (0.66–0.98) |
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| Dominant | AA vs. AG + GG | 0.67 | 1.06 (0.81–1.38) |
| Recessive | AA + AG vs. GG | 0.72 | 1.13 (0.59–2.16) |
| Additive | AA vs. AG vs. GG | 0.63 | 1.06 (0.84–1.32) |
CI, confidence interval; OR, odds ratio; PD, Parkinson’s disease.
Interaction analyses of polymorphisms of CYPs, esterases and GSTs using backward elimination model.
| Genotype | Control, (F) | PD, (F) |
| OR (95% CI) |
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| 14 (0.028) | 4 (0.008) | 0.020 | 0.250 (0.077–0.806) |
| Female | 4 (0.017) | 1 (0.004) | 0.181 | 0.215 (0.023–2.042) |
| Male | 10 (0.037) | 3 (0.011) | 0.081 | 0.289 (0.071–1.168) |
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| 27 (0.054) | 12 (0.023) | 0.008 | 0.371 (0.177–0.776) |
| Female | 12 (0.052) | 5 (0.019) | 0.044 | 0.320 (0.106–0.969) |
| Male | 15 (0.056) | 7 (0.026) | 0.090 | 0.423 (0.156–1.145) |
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| 34 (0.068) | 15 (0.028) | 0.002 | 0.354 (0.184–0.682) |
| Female | 16 (0.070) | 7 (0.027) | 0.023 | 0.334 (0.130–0.857) |
| Male | 18 (0.067) | 8 (0.030) | 0.028 | 0.360 (0.145–0.898) |
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| 40 (0.080) | 18 (0.034) | 0.002 | 0.393 (0.216–0.715) |
| Female | 17 (0.074) | 8 (0.031) | 0.050 | 0.411 (0.169–1.002) |
| Male | 23 (0.085) | 10 (0.037) | 0.016 | 0.367 (0.163–0.828) |
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| 21 (0.042) | 28 (0.053) | 0.402 | 1.299 (0.704–2.397) |
| Female | 8 (0.035) | 16 (0.062) | 0.168 | 1.889 (0.764–4.666) |
| Male | 13 (0.048) | 12 (0.044) | 0.892 | 0.943 (0.400–2.223) |
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| 28 (0.056) | 36 (0.068) | 0.390 | 1.265 (0.740–2.164) |
| Female | 11 (0.048) | 21 (0.082) | 0.167 | 1.733 (0.794–3.782) |
| Male | 17 (0.063) | 15 (0.056) | 0.933 | 0.968 (0.453–2.069) |
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| 17 (0.034) | 5 (0.009) | 0.005 | 0.209 (0.070–0.624) |
| Female | 9 (0.039) | 3 (0.012) | 0.019 | 0.178 (0.042–0.752) |
| Male | 8 (0.030) | 2 (0.007) | 0.098 | 0.236 (0.043–1.305) |
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| 34 (0.068) | 17 (0.032) | 0.003 | 0.348 (0.171–0.706) |
| Female | 22 (0.096) | 9 (0.035) | 0.003 | 0.226 (0.086–0.595) |
| Male | 12 (0.044) | 8 (0.030) | 0.329 | 0.584 (0.198–1.719) |
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| 57 (0.114) | 32 (0.061) | 0.013 | 0.504 (0.293–0.868) |
| Female | 31 (0.135) | 15 (0.058) | 0.007 | 0.339 (0.154–0.745) |
| Male | 26 (0.096) | 17 (0.063) | 0.335 | 0.688 (0.322–1.472) |
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| 117 (0.234) | 89 (0.169) | 0.018 | 0.642 (0.444–0.928) |
| Female | 58 (0.253) | 44 (0.171) | 0.011 | 0.498 (0.291–0.850) |
| Male | 59 (0.219) | 45 (0.167) | 0.321 | 0.771 (0.462–1.288) |
*P < 0.0038. CI, confidence interval; CYPs, cytochromes P450; F, frequency; GSTs, glutathione S-transferases; OR, odds ratio; PD, Parkinson’s disease.