New insights via a multicomponent cyclocondensation reaction of 2-hydroxy benzaldehyde acetoacetic ester and malononitrile were attained under efficient conditions. A detailed mechanistic study exhibits that the reaction via multicomponent, one-pot, two-step incooperating three-components' reactants under nominal conditions efficiently synthesizes the intermediates in shorter than reported time along with the formation of a novel compound [5-amino-6-cyano-3-hydroxybenzo[c]coumarin] in the presence of Ni-Cu-Al-CO3 hydrotalcite as a heterogeneous catalyst. Hydrotalcite functions as an efficient and versatile catalyst as it is safe, easy to work up, and recyclable many times under ambient conditions, and the reaction time is shorter. The aforementioned conditions make these solid basic heterogeneous catalysts environmentally friendly. The product yield obtained was 89%. The product was characterized using FTIR, LCMS, and NMR. Electrochemical studies were also carried out to check the reduction and oxidation behavior. The synthesized product showed antimicrobial activity. Antimicrobial activity against human pathogens, viz, S. Aureus, P. Aeruginosa, and P. Bulgaria, was studied by using the agar well diffusion method. The molecular docking studies of 5-amino-6-cyano-3-hydroxybenzo[c]coumarin exhibit its suitable attachment at the active center of the type IIA topoisomerases and gyrase enzymes which suggest its potential antibacterial activity when compared using ciprofloxacin drug as the control.
New insights via a multicomponent cyclocondensation reaction of 2-hydroxy benzaldehyde acetoacetic ester and malononitrile were attained under efficient conditions. A detailed mechanistic study exhibits that the reaction via multicomponent, one-pot, two-step incooperating three-components' reactants under nominal conditions efficiently synthesizes the intermediates in shorter than reported time along with the formation of a novel compound [5-amino-6-cyano-3-hydroxybenzo[c]coumarin] in the presence of Ni-Cu-Al-CO3 hydrotalcite as a heterogeneous catalyst. Hydrotalcite functions as an efficient and versatile catalyst as it is safe, easy to work up, and recyclable many times under ambient conditions, and the reaction time is shorter. The aforementioned conditions make these solid basic heterogeneous catalysts environmentally friendly. The product yield obtained was 89%. The product was characterized using FTIR, LCMS, and NMR. Electrochemical studies were also carried out to check the reduction and oxidation behavior. The synthesized product showed antimicrobial activity. Antimicrobial activity against human pathogens, viz, S. Aureus, P. Aeruginosa, and P. Bulgaria, was studied by using the agar well diffusion method. The molecular docking studies of 5-amino-6-cyano-3-hydroxybenzo[c]coumarin exhibit its suitable attachment at the active center of the type IIA topoisomerases and gyrase enzymes which suggest its potential antibacterial activity when compared using ciprofloxacin drug as the control.
Diseases
caused by bacteria are potent health hazards internationally
due to the growing number of drug-resistant microbes.[1−4] The increasing number of drug-resistant bacteria has focused the
scientists to look for the latest drug. Benzo[c]coumarin
derivatives show numerous biological actions like antimicrobial, anticancer,
anti-inflammatory, antiasthmatic, and antioxidant.[5−9] In recent years, heterocyclic compounds have attracted
strong interest due to their pharmacological properties and biological
activity.In molecular studies, type IIA topoisomerase enzymes
multiply the
eukaryotic topoisomerases II and relax DNA in an ATP-dependent reaction,
while the bacterial topoisomerases IV multiply enzymes of decadent
DNA and gyrase enzymes of negative supercoils into DNA.[10]The production of polyfunctionalized pyrans
using Mg/La mixed oxides
was reported by Seshu et al., which was synthesized using malononitrile,
aldehydes, and ethyl acetoacetates as reactants.[11] The literature suggests few organic bases as catalysts,[12,13] viz., tetrabutylammonium bromide, l-proline, rare earth
perfluorooctanoates, and hexadecyltrimethylammonium bromide, for the
preparation of benzocoumarin and 4H-pyrans using
multicomponent synthesis. Also, the multicomponent synthesis of 5-amino-6-cyano-3-hydroxybenzocoumarin
has been reported using MgO as catalysts.[14] All these catalysts have an advantage, while some are disadvantaged
by restrictions such as strict reaction conditions, low yields, poor
recyclability, and tedious workup. Thus, the development of an appropriate
solid base catalyst for the efficient synthesis of 4H-pyrans and 5-amino-6-cyano-3-hydroxybenzocoumarin in one pot remains
an important target for chemists, as an economically and eco-friendly
idea, and the use of environmentally friendly solvents is very desirable.
In the past few years, a heterogeneous catalyst derived from alkali
earth metallic precursors has found application in catalyzed reactions.
Thus, the heterogeneous solid base hydrotalcite catalysts have been
recognized as potential alternatives to homogeneous organic basic
catalysts.This paper reports the synthesis and antimicrobial
activity of
5-amino-6-cyano-3-hydroxybenzo[c]coumarin. This shows
that the compound synthesis follows a different mechanism (Scheme ) from the reported
mechanism. In the present work, various solid base catalysts for the
preparation of 5-amino-6-cyano-3-hydroxybenzo[c]coumarin
have been tried. We have identified that Ni–Cu–Al–CO3 hydrotalcite acts as an efficient catalyst in multicomponent
condensation of 2-hydroxy benzaldehyde, acetoacetic ester, and malononitrile
(Scheme ). Ni–Cu–Al–CO3 hydrotalcite is a recyclable catalyst, and the presence of
nickel, copper, and aluminum increases the basicity of the catalyst.
The present catalyst leads to 5-amino-6-cyano-3-hydroxybenzo[c]coumarin in high yields within short reaction times. After
that, the molecular docking studies were carried out to evaluate the
possible interaction of synthesized compounds with active pockets.
After that, the electrochemical studies were carried out to check
the response, in which a synthesized compound shows reduction and
oxidation behavior.
Scheme 1
Synthesis of 5-Amino-6-cyano-3-hydroxybenzo[c]coumarin
by the Ni–Cu–Al–CO3 Hydrotalcite Catalyst
To the best of our knowledge, Ni–Cu–Al–CO3 is being reported as a heterogeneous catalyst for the synthesis
of 5-amino-6-cyano-3-hydroxybenzocoumarin under mild reaction conditions.
MgO has been studied as a heterogeneous catalyst due to its good activity
at low temperature (at room temperature) and low cost. Lowering of
catalytic activity due to leaching of MgO has restricted its application.
Another advantage of Ni–Cu–Al–CO3 hydrotalcites
is high yield (i.e., 89% yield in comparison with MgO which resulted
in 80% yield). Hydrotalcites are more basic than MgO due to the presence
of more basic metal in their structure. In a previous paper, MgO was
used as a catalyst one time, but hydrotalcite was reused three times.
The yield, conversion, and purity of the product were determined using
various analytical techniques.
Results and Discussion
Synthesis and Characterizations of Ni–Cu–Al–CO3 Hydrotalcite
The synthesis of hydrotalcite is simple,
nontoxic, and environmentally friendly. The Ni–Cu–Al–CO3 hydrotalcite was synthesized via the coprecipitation method.[15] The Ni–Cu–Al–CO3 hydrotalcite has been characterized by powder-X-ray diffraction
(P-XRD), Fourier transform infrared spectroscopy (FTIR), thermal gravimetric
analysis (TGA), and transmission electron microscopy (TEM).The hydrotalcite Ni–Cu–Al–CO3 synthesized
in ratios of 1:3:1 was dried overnight and after drying exhibited
a layered structure of compounds. The XRD patterns confirm the anionic
clay-like structures of the crystallized hydrotalcite (Figure a). The 2 theta angles reflected
in X-ray were at 12.16°, 23.4°, 35.43°, 48.2°,
and 61.5° with corresponding d values of 7.273,
3.79, 2.53, 1.88, and 1.50 Å, respectively, confirming the synthesis
of the hydrotalcite. The product exhibited low crystallinity because
of the incorporation of the copper in higher molar ratios into the
reaction mixtures. These broadenings of the peaks can be suggested
due to the small size of the particles of the existence of a strain
among crystalline phases. The second reason is that the structures
exhibit octahedron coordination, and serious deformations occur via
incorporating copper in them. This effect is known as Jahn–Teller
distortion. On further increasing the ratio, the copper peak at 12.5
appeared, which corresponds to the hydroxylated structure. The presence
of copper oxide was indicated by the black color. Its presence was
further confirmed by the presence of the peak at 39.17, which is a
typical peak of copper oxide. Therefore, XRD exhibited poor crystallinity.
Our findings were supported by other research; i.e., similar results
were also reported by Fetter et al., Venugopal et al., and Behamani
et al.[16−22]
Figure 1
PXRD
of Ni–Cu–Al–CO3 hydrotalcite
[a], FTIR of Ni–Cu–Al–CO3 hydrotalcite
catalyst [b], TGA of Ni–Cu–Al–CO3 hydrotalcite
catalyst [c], and TEM of Ni–Cu–Al–CO3 hydrotalcite (A and B fresh catalyst image and C and D recycle catalyst
image) [d].
PXRD
of Ni–Cu–Al–CO3 hydrotalcite
[a], FTIR of Ni–Cu–Al–CO3 hydrotalcite
catalyst [b], TGA of Ni–Cu–Al–CO3 hydrotalcite
catalyst [c], and TEM of Ni–Cu–Al–CO3 hydrotalcite (A and B fresh catalyst image and C and D recycle catalyst
image) [d].The bands (Figure b) from the FTIR spectra were similar to
the CO3 anion
interlamellar-like phases in hydrotalcites. The absorption bands around
3434.88 cm–1 were ascribed to the stretching vibrations
of the valence OH groups, which were present in the brucite layer,
and the water molecules occupy the spaces in interlamellates which
are related to carbonates via hydrogen bonds, as the disordered structure
appeared, followed by the unfolding of the νOH band. Another
peak appearing at 1629 cm–1 was due to the presence
of vibrations of reformatted water molecules which were intercalated
in interlamellate spaces. The band located at 1384 cm–1 exhibited the presence of the CO3 anion. All the bands
which were recorded in the area of low frequency were ascribed to
the vibrations of metallic oxides MO and O–M–O, where
M = Cu, Ni, or Al. These bands appear in between 800 and 400 cm–1. These readings which were recorded were supported
by several researchers, as reported in the literature.[16,22,23]The weight loss noticed
in the TGA graph was mainly found to be
in two places. The TGA curves of Ni–Cu–Al–CO3 HT were carried out up to 800 °C in a N2 gas
flow. The first weight loss exhibited (Figure c) at about 230 °C can be attributed
to the presence of the water molecules adsorbed on the surface of
the material, i.e., because of the presence of the coordinated water
molecules with the surface of the catalyst. The second weight loss
was at around 390 °C because of the presence of the metal oxide
formations. Further, no weight loss was substantially exhibited over
the 450 °C temperature. Our readings were similar to the reported
readings in the literature.[18,22]TEM results of
the Ni–Cu–Al–CO3 catalyst are shown
in Figure d (A and
B) as a fresh catalyst or in Figure d (C and D) as a recycled catalyst. The corresponding
TEM images of the fresh sample and recycled catalyst sample of the
Ni–Cu–Al–CO3 catalyst NiO particles
with a diameter around 15–90 nm have been observed in the transmission
electron microscope (TEM) analysis of the spent catalyst, and the
presence of nickel and copper oxide particles (dark zones) over the
mesoporous structure of Al2O3 suggests changes
in the surface of the catalyst.
Investigation
of Catalytic Activity of Ni–Cu–Al–CO3 Hydrotalcite and Its Best Results Obtained
The reactions
were carried out by optimizing various parameters given as follows.
The detailed investigation using different hydrotalcite catalysts
is shown in Figure A. In the presence of a catalyst (100 mg), the highest yield obtained
was 89% with Ni–Cu–Al–CO3 hydrotalcites
as catalysts. Because Cu2+ 3d9,4s0 shows strong static John–Teller distortion, CuII has relatively strong electronegativity compared to other
transition metals. The basicity is directly proportional to electronegativity,
so Ni–Cu–Al–CO3 hydrotalcites are
more basic in nature as compared to other hydrotalcites. The lowest
yield of 35% was obtained with Ca–Al–CO3 hydrotalcite
because Ca2+ and Al3+ have a small size and
show higher solvation in protic solvent. So, the basicity of the Ca–Al–CO3 hydrotalcite in protic solvent is reduced. The catalyst could
be reused at least four to five times with only a slight reduction
in the activity of the catalyst, as shown Figure B. The reaction was highly sensitive to the
nature of the solvent, as shown in Figure C below. Our investigations exhibited that
the highest yields of the reaction product were obtained by using
the polar organic solvents. Salicyaldehyde, ethyl acetoacetate, and
malononitrile are soluble in water and miscible in ethanol and become
a homogeneous mixture, so that reacting molecules come closer to each
other, hence increasing effective collision. Ethanol and water are
protic solvents and thus stabilize the transition state in reactant
molecules; hence, higher yields are obtained.
Figure 2
Effect of different hydrotalcites
as catalysts [A], effect of recycling
of Ni–Cu–Al hydrotalcite catalysts [B], and effect of
solvents in the presence of a Ni–Cu–Al hydrotalcite
catalyst [C].
Effect of different hydrotalcites
as catalysts [A], effect of recycling
of Ni–Cu–Al hydrotalcite catalysts [B], and effect of
solvents in the presence of a Ni–Cu–Al hydrotalcite
catalyst [C].The effect on the product yield
in the presence of different catalyst
concentrations of Ni–Cu–Al–CO3 hydrotalcite
was also investigated. Initially, with the increase in the concentration
of catalysts from 20 to 80 mg, the yield of the products was also
enhanced from 60% to 78%, respectively. The highest yield of 89% was
obtained with the concentration of 100 mg of catalyst, as shown in Table below. The reaction
effected by temperature change was studied in the temperature range
(room temp to 120 °C) for the synthesis of 5-amino-6-cyano-3-hydroxybenzo[c]coumarin. According to the collision model, a chemical
reaction can occur only when reactant molecules collide with more
than a certain amount of kinetic energy and in the proper orientation
shown Table .
Table 1
Effect of Concentration of the Ni–Cu–Al
Hydrotalcite Catalyst
S. no.
catalyst
amount (mg)
yield (%)
1
20
60
2
40
67
3
60
72
4
80
78
5
100
89
Table 2
Effect of Temperature
on Product Yield
in the Presence of Catalyst
S. no.
temperature
(°C)
time (minutes)
yield (%)
1
room temperature
300
60
2
60
250
75
3
80
180
89
4
100
100
85
5
120
90
82
Characterization of Product 5-Amino-6-cyano-3-hydroxybenzo[c]coumarin
In the mass spectra of the final compound,
the molecular ion peak is obtained at 252 m/z, matching to the calculated molecular weight of the molecule
supporting the proposed structure. In the FTIR spectra of the final
compound, a band due to the (CN) group appeared at 2195 cm–1. The bands due to NH2 stretching vibrations were observed
at 3351 cm–1. The other characteristic groups (C–H),
(C–C), and (C–O) were observed at 3450, 1606, and 1185
cm–1, respectively. These observations support the
proposed structure. In the C13 NMR spectrum, the cyclic
ester peak is observed at 156.66–152 ppm. Here the carbon is
attached to two electronegative oxygen atoms, one of which is sp2 hybridized. Due to this, C13 shows a large chemical
shift (deshielding). The nitrile (CN) peak is at 117.60 ppm. The carbon
is directly attached to the electronegative nitrogen atom which is
SP hybridized and hence shows a large chemical shift value. Aromatic
carbon signals are from 129.45 to 129.49 ppm, which show slight deshielding
due to the electron-withdrawing group (CN group) which is directly
attached to C13. The peak at 125.88 ppm shows a slight
shielding due to the electron-donating group attached to C13. The 124.75 ppm peak shows slight shielding due to the electron-donating
group (NH2), which is attached directly to C13 (carbon attached to OH shows slight deshielding as compared to a
carbon attached to the NH2 group). It is due to the electronegativity
of oxygen which is greater than nitrogen, as shown in the spectra.The purity of the synthesized product was greater than 96%, checked
by HPLC techniques. The synthesized product with a flow rate of 0.6
mL/min and mobile phase used was 0.1% formic acid (pump A) and 100%
methanol (pump B).
Mechanism of 5-Amino-6-cyano-3-hydroxybenzo[c]coumarin
The possible mechanism for the formation
of 5-amino-6-cyano-3-hydroxybenzocoumarin is shown Figure . The first step is the formation
of intermediate 3 by the Knoevenagel condensation of
2-hydroxybenzeldehyde 1 and ethyl acetoacetate 2.
Figure 3
Reaction mechanism of 5-amino-6-cyano-3-hydroxybenzocoumarin.
Reaction mechanism of 5-amino-6-cyano-3-hydroxybenzocoumarin.The second pathway involves the initial step that
leads to the
formation of intermediate 3 by the Knoevenagel condensation
of salicylaldehyde (1) and malononitrile (4). This step is followed by Michael addition by the malononitrile
anion (4), and subsequent cyclization results in the
final product (5), i.e., 5-amino-6-cyano-3-hydroxybenzo[c]coumarin. The synthesized compound of 5-amino-6-cyano-3-hydroxybenzo[c]coumarin is the same. However, our mechanism of this compound
is a different mechanism from that found by Valizadeh.[14] They have reported that the intermediate is
favored by Knoevenagel condensation of salicylaldehyde and malononitrile,
but in our reaction mechanism, the formation of intermediate 3 was a result of Knoevenagel condensation of salicylaldehyde
and ethyl acetoacetate. This intermediate (3) is more
electrophilic due to an α,β-unsaturated carbonyl group,
which decreases the energy of the LUMO intermediate (low in energy
of LUMO) as compared to the intermediate found by Valizadeh[14] et al. The intermediate become highly electrophilic
and reacted rapidly with a nucleophile (protonated malononitrile).In our reaction, the Knoevengel condensation reaction is the first
step. When the reaction of ethyl acetoacetate (2) with
malononitrile (4) was tried, no product was formed, which
shows that this reaction is not possible because the methyl active
group is present in both components.
Electrochemical
Studies
The electrochemical
response of the synthesized compound 5-amino-6-cyano-3-hydroxybenzo[c]coumarin was investigated by cyclic voltammetry (CV) using
Ag/AgCl, glassy carbon, and silver wire as a reference and working
and counter electrodes, respectively. CV was employed to investigate
the electrochemical changes of 5 ppb of catalyst in BR buffer (pH
10.5) solution by applying potential ranging from −2.0 to 1.5
V at the scan rate of 50 mV/s, as shown in Figure A. During the scan, an oxidation peak was
observed at 0.955 V, which was an indication of the oxidation state
in amino-6-cyano-3-hydroxybenzo[c]coumarin (Table ). A cathodic peak
was observed at −0.499 V, which corresponds to the reduction
of synthesized compounds. The cyclic voltammogram of the title compound
was recorded at various scan rates (from 0.02 to 0.1 V/s) in the same
potential range as previously shwon in Figure B. On increasing the scan rate, it was observed
that the peak current increases. The anodic peak potential was found
to shift toward a more positive value, while the cathodic peak potential
moves toward a more negative value. The shifting of peak potential
and increase in peak current indicate the mode of interaction and
the nature of binding of compounds in solution.[31] Based on information of potential separation and linearity
at all scan rates, the title compound exhibits reversible behavior
in the present electrolyte solution.[32][34]
Figure 4
Cyclic voltammograms were recorded in BR buffer
(pH 10.5) containing
0.1 M KCl as electrolyte solution on a glassy carbon electrode at
the scan rate of 50 mV/s [A]. Cyclic voltammogram of the 5-amino-6-cyano-3-hydroxybenzo[c]coumarin sample at various scan rates of 0.02 V/s to 0.1
V/s [B]. Represents linearity curves at different scan rates [C].
Table 3
Electrochemical Data for Compound
5-Amino-6-cyano-3-hydroxybenzo[c]coumarin vs Ag/AgClin
BR Buffer (pH 10.5) Containing 0.1 M KCl as a Supporting Electrolyte
on a Glassy Carbon Electrode at the Scan Rate of 50 mV/s and 25°
C
compound
Epa/V
Epc/V
ΔEp/V
E1/2/V
5-amino-6-cyano-3-hydroxybenzo[c]coumarin
0.955
–0.499
1.454
0.228
Cyclic voltammograms were recorded in BR buffer
(pH 10.5) containing
0.1 M KCl as electrolyte solution on a glassy carbon electrode at
the scan rate of 50 mV/s [A]. Cyclic voltammogram of the 5-amino-6-cyano-3-hydroxybenzo[c]coumarin sample at various scan rates of 0.02 V/s to 0.1
V/s [B]. Represents linearity curves at different scan rates [C].A plot between the peak current (ip) and the square
root of the
scan rate (υ1/2) is linear (Figure B and 4C). For the
synthesized compound, it is suggested that the reaction that occurs
on the electrode surface is reversible, and there is confirmed diffusion-controlled
behavior of electrodes.
Molecular Docking Studies
Molecular
docking analysis is a crucial tool for analyzing interactions and
motions during ligand–protein binding in structural molecular
biology and computer-assisted drug discovery.[24,25] This drug was docked with a protein chosen using the Swiss ADME-Target
prediction system. Before choosing the protein, the activities of
the specific ligand were investigated, and the strong activities were
taken into consideration. For the interaction, the protein was received
in PDB format from the RCBS protein library,[26,27] as shown in Figure B,D. With the help of AutodockVina[28] and
Chimera,[29] the titled molecule is studied
further for biological activity. Lowering the value of binding energy
more will show biological activity. In order to study the best in
silico conformation with compounds under study, the Topoisomerase
II alpha as a target receptor was used for docking studies. The titled
molecule’s structure was drawn in Chimera by using a canonical
smiles structure using Swiss ADME.[30] The
structure was reduced to the minimum energy state. The suitable protein
was downloaded from the RSB Protein data bank in PDB format, and then
protein was prepared for docking by removing water moieties. The docking
studies suggest well-established hydrogen bonds with amino acids at
active sites. The active sites are locations where Topoisomerase II
alpha formed a complex with compounds under evaluation. The active
pocket consisted of amino acid residues such as LEU476, HIS475, GLY472,
MET340, PHE356, ALA302, and MET295, as shown in Figure c. The energy minimization program was used
to create a 3D structure of synthesized compounds; it was then used
for protein ligand docking. Figure d exhibits docked images of the standard drug and synthesized
compound ciprofloxacin. Figure a and b exhibits the binding energy and inhibition constant
of compounds as well as the standard. In silico studies suggest that
all the molecules under study showed good binding energy toward the
target protein and the value of −0.2 kJ mol–1.
Figure 5
Protein binding active site of control drug ciprofloxacin [A].
Receptor with ligand docking of control drug [B]. Synthesis of 5-amino-6-cyano-3-hydroxybenzo[c]coumarin of the protein binding active site [C]. Receptor
with ligand molecule docking autodockvina [D].
Protein binding active site of control drug ciprofloxacin [A].
Receptor with ligand docking of control drug [B]. Synthesis of 5-amino-6-cyano-3-hydroxybenzo[c]coumarin of the protein binding active site [C]. Receptor
with ligand molecule docking autodockvina [D].
Antimicrobial Activity
The MIC of
the synthesized compound was evaluated by analyzing the turbidity
observed in the culture tubes containing compounds ranging from 0.1
to 1 mg/mL, which suggests bacterial growth, whereas no growth could
be seen in culture tubes containing compounds ranging from 0.5 to
10 mg/mL (Table ).
A small aliquot of the sample from the culture tube containing compounds
ranging from 0.5 to 10 mg/mL were collected and poured in an agar
plate, which were allowed to grow for 24 h at ambient temperature
conditions. No growth of bacteria was seen, thus indicting the antibacterial
property of the compound at this particular concentration. Thus, it
can be inferred that the MIC of the compound is observed at a concentration
of 0.5 mg/mL.
Table 4
Minimum Inhibitory Concentration of
Compoundsa
bacterial
growth at different concentrations
compound
dilution
for same bacterial concentration
sets
10 mg/mL
5 mg/mL
1 mg/mL
0.5 mg/mL
0.1 mg/mL
Staphylococcus
aureus
1
-
-
-
-
+
2
-
-
-
-
+
3
-
-
-
-
+
Pseudomonas
aeroginosa
1
-
-
-
-
+
2
-
-
-
-
+
3
-
-
-
-
+
Proteus
vulgaris
1
-
-
-
-
-
2
-
-
-
-
+
3
-
-
+
-
+
(+) = Turbidity
due to microbial
growth; (−) = No Turbidity.
(+) = Turbidity
due to microbial
growth; (−) = No Turbidity.
Conclusion
The present
article reports the synthesis of heterocyclic compound
5-amino-6-cyano-3-hydroxybenzo[c]coumarin using an
environmentally friendly procedure via Ni–Cu–Al–CO3 hydrotalcite, which has been used as efficient catalysts.
These catalysts are inexpensive and nontoxic powders. Data of spectra
and another analytical research supported the formation of 5-amino-6-cyano-3-hydroxybenzo[c]coumarin. The present work offers many merits such as
ethanol/water, which were used as solvents, and the reaction conditions
were extremely simple. There was operational simplicity; the reaction
time was short and easy to work up; and purification was also easy
for the products via simple means of recrystallization. The addition
of the concentration of catalysts, i.e., hydrotalcites (0.1 g), viz.,
Ni–Cu–Al–CO3 hydrotalcite, resulted
in the formation of product in good yields (89%), and with water the
yield obtained was 70%. No yields were obtained when the reaction
was carried out in solvents like acetonitrile and acetone. The molecular
docking study showed the antimicrobial activity presence in the compounds.
This was further confirmed by antimicrobialactivity. The synthesized
compounds thus can be considered as promising leads, having biological
activity such as antimicrobial. The electrochemical study showed the
reduction and oxidation behavior of synthesized compounds.
Experimental Section
Methods and Materials
Nickel sulfate,
copper sulfate, and aluminum nitrate were purchased from Rankem Fine
Chemicals Ltd. NaOH and Na2CO3 were purchased
from Fisher Scientific, respectively. The chemicals and the solvents
were procured from laboratory/spectroscopy chemical suppliers and
were used without purification. The salicylaldehyde was purchased
from Himedia, and malononitrile, ethyl-acetoacetate, and ethanol were
purchased from Thermo-Fisher.All the catalyst patterns were
obtained by Rigaku X’Pert diffractometer equipment, R (Modal
no Mini Flex 600), using Cu Ka radiation (λ = 1.5406 Å)
and a step size of 0.02°, voltage of 40 kV, and tube current
of 15 mA. The data collected were in the 2θ range of 3–900.
The goniometer used is Mini Flex 300/600, and the scanning speed of
the instrument is 10.0000°/min. The incident slit is 1.250°,
with a length limiting slit of 10.0 mm. The scanning mode is continuous,
and the detector used is D/te X Ultra. The thermal stability of the
hydrotalcite was determined using a Shimadzu thermal analyzer, Model
No. TGA-50. The weight losses were recorded in the temperature range
between 30 and 1000 °C, with a heating rate of 10 °C/min
and under a constant flow of nitrogen (20 ± 0.5 mL/min). FTIR
is one of the molecular vibrational spectroscopic techniques used
to investigate the structural bonding and chemical properties of compounds
and hence is helpful in the determination of the quantitative as well
as qualitative analysis. The various functional groups have their
frequencies, and hence they absorb specific IR radiations which detect
the presence or absence of the groups. Infrared spectra were recorded
using the PerkinElmer FTIR spectrometer in the range 4000–400
cm–1 using KBr pellets. IR vibration modes of hydroxyl
groups and intercalated anions have been used in identifying interlayer
species. C13 and 1H NMR spectra of the synthesized
compounds were recorded using a Bruker 300 MHz or Bruker Advance III
500 MHz instrument, respectively. Chemical shifts (d) are given in parts per million using TMS as an internal standard.
The abbreviations s, d, t, q, and m are used to indicate singlet,
doublet, triplet, quadruplet, and multiple signals, respectively.
The molecular weight of the compound was determined in an LC-MS instrument
manufactured by Shimazdu equipment model number 8030.HPLC analysis
(Shimadzu LC8030 AD) was carried out on a C18 reversed-phase
analytical column (150 mm–4.6 mm, particle size 5 mm) at 37
°C using mobile phases A, 0.1% formic acid in distilled water,
and B, 100% methanol at a flow rate 0.6 mL min–1 (Table ). The following
gradient was applied: linear increase from solution 30% B to 100%
B in 15 min. The total flow rate is 0.6000 mL/min, and the pump concentration
of B/A is 75:25%. The maximum and minimum pressure limits of both
pumps A and B are 300 kgF/cm3 and 0 kgF/cm3,
respectively. The detector used is a UV detector along with the wavelength
of 254 nm with an auxillary range of 1.04 Au/m, and the temperature
of the column oven is 40 °C.
Table 5
Zone of Inhibition
Using 5-Amino-6-cyano-3-hydroxybenzo[c]coumarin and
Standard Ciprofloxacina
zone of
inhibition of standard drug ciprofloxacin
zone of inhibition of synthesized compound
S. no.
microbes
A
B
A
B
1
Staphylococcus aureus
40 mm
≥40 mm
20 mm
21 mm
2
Pseudomonas aeruginosa
37 mm
40 mm
10 mm
22 mm
3
Proteus bulgaria
39 mm
35 mm
10 mm
21 mm
A is the concentration
(100 μg/mL) of the standard drug and synthesized compounds,
and B is the concentration (500 μg/mL) of the
standard and synthesized compounds.
A is the concentration
(100 μg/mL) of the standard drug and synthesized compounds,
and B is the concentration (500 μg/mL) of the
standard and synthesized compounds.
Preparation of the Ni–Cu–Al–CO3 Hydrotalcite Catalyst
The Ni–Cu–Al–CO3 hydrotalcite was synthesized using a coprecipitation technique
at pH 10. In a typical method, 1 M NiSO4 (1.9 g), 3 M CuSO4 (9 g), and 1 M Al2NO3 (2.6 g) corresponding
to a Ni/Cu/Al molar ratio of 1:3:1 were dissolved in water (50 mL).
Addition of 1 M NaOH and 1 M Na2CO3 results
in the precipitation. After the precipitation is completed, the solutions
are kept for 6 h. The precipitate was washed several times with deionized
water and filtered. The obtained catalyst was dried at 120 °C
for 8 h.
General Synthesis of the Product [5-Amino-6-cyano-3-hydroxybenzo[c]coumarin]
A mixture of salicyl-aldehyde (2 mmol)
and ethyl-acetoacetate (2 mmol) and 100 mg of Ni–Cu–Al–CO3 hydrotalcite catalyst were mixed in 5 mL of ethanol/water
at 80 °C for 30 min. After 30 min, malononitrile (2 mmol) was
added to the reaction mixture, keeping the same reaction conditions.
After 1 h when the reaction was completed, the reaction mixture was
filtered using the Whatman filter paper, and the filtered mass was
kept for 24 h for the separation of the catalyst from the product;
the solvent was also evaporated from the product. A reported compound
named [5-amino-6-cyano-3-hydroxybenzo[c]coumarin]
was obtained. The color of the compound obtained was brownish orange
which was soluble in ethanol, and the observed melting point was 201
°C. Brownish orange powder, mp 201 °C; 1H NMR
(300 MHz, MeOH) (δ ppm) 9.96 (broad OH, 1H), 8.67 (s, 1H), 7.60
(dd, j = 1.42 Hz and j = 8.10 Hz),
7.378 (m, 2H), 7.36 (dd, j = 1.45 Hz, j = 8.12 Hz, 1H), 7.122 (broad, 2H, NH2). 13C NMR (75 MHz CDCl3-d6) δ
= 156.66, 152.07, 135.73, 129.49, 129.10, 125.88, 124.75, 118.04,
117.60, 113.73, 103.48, 61.60, 50.33, 14.26, 77.23 (solvent peak).
Anal. Calcd (%) for C14H8N2O3; LCMS spectra (ESI) m/z (%) 251 (M–).
1H NMR and 13C NMR Spectra
of the 3-Acetylcoumarin [Intermediate]
Yellow powder, mp
120 °C; 1H NMR (CDCl3, 500 MHz) (δ
ppm) 2.71 (aliphatic C–H), 7.32–7.65 (Ar–H),
8.45 (benzo-fused-coumarin-H-proton). 13C (CDCl3, 500 MHz) (δ ppm) 134.38 (C7), 130.23 (C5), 124.97 (C6), 124.47
(C8), 118.21 (C9), 116.61 (C3) (all peaks were observed to have a
chemical shift), 195.386 (C17-carbonyl carbon), 30.493 (C19-methyl
group carbon), 159.146 (C2), 155.251 (C10), 147.395 (C4), 77 (solvent
peak); LCMS (ESI) m/z (%) 189 (M+).
Evaluation of Antimicrobial
Activities
Working Stock Solution Preparation
The stock solution was prepared by dissolving 0.1,
0.5, 1, 5, and 10 mg of synthesized compound in 1 mL of DMSO. Three
prospective pathogenic microbes were evaluated against five different
concentrations of synthesized compound.
Microorganisms
Used and Their Preparation
Three microbial species were used
for the present study which are
as follows: Staphylococcus aureus. MTCC 87 it is
an example of Gram-positive bacteria, Pseudomonas aeruginosa. MTCC 424 an example for Gram-negative bacteria, Proteus
bulgaris (Figure ). MTCC 742 is an example of Gram-negative bacteria. All bacterial
samples were cultured into nutrient agar and malt extract broth for
incubation overnight at 37 °C.
Figure 6
Antimicrobial activity of the compound
5-amino-6-cyano-3-hydroxybenzo[c]coumarin synthesized
using standard drug ciprofloxacin
with Staphylococcus aureus [A], Pseudomonas
aeruginosa [B], and Proteus bulgaria [C].
Antimicrobial activity of the compound
5-amino-6-cyano-3-hydroxybenzo[c]coumarin synthesized
using standard drug ciprofloxacin
with Staphylococcus aureus [A], Pseudomonas
aeruginosa [B], and Proteus bulgaria [C].
Antimicrobial Susceptibility
Testing
Well Diffusion Method
Agar well
diffusion is a method which is widely used to study the antimicrobial
activity of synthesized compounds. Similarly to the procedure used
in the disc diffusion method, the agar plate surface is inoculated
by spreading a volume of the microbial inoculum over the entire agar
surface. Then, a hole with a diameter of 6–8 mm is punched
aseptically with a sterile cork borer or a tip, and a volume (20–100
μL) of the antimicrobial agent or synthesized compound solution
at the desired concentration is introduced into the well. Then, agar
plates are incubated under suitable conditions depending on the test
microorganism. The antimicrobial agents diffuse in the agar medium
and inhibit the growth of the microbial strain tested.
Minimum Inhibitory Concentrations (MICs)
The minimum
inhibitory concentration of the synthesized compound
was then calculated at different concentrations ranging from 0.1,
0.5, 1, 5, and 10 mg/mL against Staphylococcus aureus, Pseudomonas aeroginosa, and Proteus vulgaris by a broth dilution method in nutrient broth. The concentration
of culture was adjusted to 0.2 at 568 nm (1 × 108 CFU/mL,
0.5 McFarland’s standard). Positive and negative control was
used as a standard. The minimum inhibitory concentration was evaluated
by moving the turbidity. Small aliquots of the sample (approximately
50 μL) from the culture tubes showing the least or no turbidity
were taken and poured in an agar plate for 24 h, and the bacterial
growth was observed. The experiment was performed in triplicates (Krishnan
et al., 2015; Cavassin et al., 2015).
Authors: Eric F Pettersen; Thomas D Goddard; Conrad C Huang; Gregory S Couch; Daniel M Greenblatt; Elaine C Meng; Thomas E Ferrin Journal: J Comput Chem Date: 2004-10 Impact factor: 3.376
Authors: Sharad C Karad; Vishal B Purohit; Rahul P Thummar; Beena K Vaghasiya; Ronak D Kamani; Parth Thakor; Vasudev R Thakkar; Sampark S Thakkar; Arabinda Ray; Dipak K Raval Journal: Eur J Med Chem Date: 2016-12-09 Impact factor: 6.514
Authors: Garrett M Morris; Ruth Huey; William Lindstrom; Michel F Sanner; Richard K Belew; David S Goodsell; Arthur J Olson Journal: J Comput Chem Date: 2009-12 Impact factor: 3.376