| Literature DB >> 35567723 |
Yang Sun1,2, Lingling Huang1,2, Jianqi Nie3,4,5, Kai Feng1,2, Yupeng Liu6,7, Zhonghu Bai8,9,10,11.
Abstract
Herpes zoster is caused by reactivation of the varicella zoster virus (VZV). Researching and developing a herpes zoster vaccine will help to decrease the incidence of herpes zoster. To increase the bioreactor productivity, a serum-free HEK293 cell perfusion process with adenovirus vector herpes zoster (rAd-HZ) vaccine production was developed efficiently using the design of experiment (DoE) method. First, serum-free media for HEK293 cells were screened in both batch and semi-perfusion culture modes. Then, three optimal media were employed in a medium mixture design to improve cell culture performance, and the 1:1 mixture of HEK293 medium and MCD293 medium (named HM293 medium) was identified as the optimal formulation. On the basis of the HM293 medium, the relationship of critical process parameters (CPPs), including the time of infection (TOI), multiplicity of infection (MOI), pH, and critical quality attributes (CQAs) (adenovirus titer (Titer), cell-specific virus yield (CSVY), adenovirus fold expansion (Fold)) of rAd-HZ production was investigated using the DoE approach. Furthermore, the robust setpoint and design space of these CPPs were explored. Finally, the rAd-HZ production process with parameters at a robust setpoint (TOI = 7.2 × 106 cells/mL, MOI = 3.7, and pH = 7.17) was successfully scaled-up to a 3-L bioreactor with an alternating tangential flow system, yielding an adenovirus titer of 3.0 × 1010 IFU/mL, a CSVY of 4167 IFU/cells, a Fold of 1117 at 2 days post infection (dpi). The DoE approach accelerated the development of a HEK293 serum-free medium and of a robust adenovirus production process.Entities:
Keywords: Adenovirus vector; Design of experiment.; Herpes zoster vaccine; Perfusion; Serum-free
Year: 2022 PMID: 35567723 PMCID: PMC9107214 DOI: 10.1186/s13568-022-01398-7
Source DB: PubMed Journal: AMB Express ISSN: 2191-0855 Impact factor: 4.126
Mixture design and experimental data of the responses
| No. | HEK293 medium | YCD293 medium | MCD293 medium | Fold expansion |
|---|---|---|---|---|
| 1 | 1 | 0 | 0 | 5.2 |
| 2 | 0 | 1 | 0 | 4.0 |
| 3 | 0 | 0 | 1 | 4.9 |
| 4 | 1/2 | 1/2 | 0 | 4.2 |
| 5 | 1/2 | 0 | 1/2 | 5.9 |
| 6 | 0 | 1/2 | 1/2 | 4.1 |
| 7 | 2/3 | 1/6 | 1/6 | 5.1 |
| 8 | 1/6 | 2/3 | 1/6 | 5.4 |
| 9 | 1/6 | 1/6 | 2/3 | 5.6 |
| 10 | 1/3 | 1/3 | 1/3 | 5.5 |
| 11 | 1/3 | 1/3 | 1/3 | 5.3 |
| 12 | 1/3 | 1/3 | 1/3 | 5.4 |
Reduced combinatorial design and experimental data
| No. | TOIa | MOIb | pH | Titer | CSVYc | Foldd |
|---|---|---|---|---|---|---|
| 1 | 4 | 2 | 7.0 | 1.0E + 10 | 2222 | 1111 |
| 2 | 4 | 5 | 7.0 | 9.5E + 09 | 1939 | 388 |
| 3 | 4 | 10 | 7.2 | 1.2E + 10 | 2667 | 267 |
| 4 | 4 | 15 | 7.2 | 1.3E + 10 | 2453 | 164 |
| 5 | 8 | 2 | 7.2 | 2.1E + 10 | 2770 | 1385 |
| 6 | 8 | 5 | 7.2 | 1.9E + 10 | 2262 | 452 |
| 7 | 8 | 10 | 7.0 | 6.6E + 09 | 821 | 82 |
| 8 | 12 | 15 | 7.0 | 6.3E + 09 | 497 | 33 |
| 9 | 12 | 2 | 7.0 | 5.5E + 09 | 435 | 218 |
| 10 | 12 | 5 | 7.2 | 1.6E + 10 | 1393 | 279 |
| 11 | 16 | 10 | 7.0 | 4.0E + 09 | 247 | 25 |
| 12 | 16 | 15 | 7.2 | 9.5E + 09 | 590 | 39 |
| 13 | 16 | 2 | 7.2 | 9.5E + 09 | 625 | 313 |
| 14 | 4 | 2 | 7.0 | 8.5E + 09 | 1574 | 787 |
| 15 | 8 | 2 | 7.2 | 1.7E + 10 | 1833 | 917 |
| 16 | 8 | 10 | 7.0 | 4.6E + 09 | 575 | 58 |
a TOI: time of infection
b MOI: multiplicity of infection
c CSVY: cell-specific virus yield
d Fold: adenovirus fold expansion
Fig. 1Cell fold expansion of HEK293S cells in different medium within 3 days
Fig. 2The HEK293S cells growth characteristics in batch culture mode. The cell growth curve (a) and metabolite profiles of glucose (b), glutamine (c), lactate (d)
Fig. 3The HEK293S cells growth characteristics in semi-perfusion culture model. The cell growth curve (a) and metabolite profiles of glucose (b), glutamine (c), lactate (d)
Fig. 4The contour plot of mixture design with cell fold expansion as response
Coefficients and ANOVA results for the reduced combinatorial model
| Termsa | Titer | CSVYb | Foldc | |||
|---|---|---|---|---|---|---|
| Coefficient | P value | Coefficient | P value | Coefficient | P value | |
| Constant | 3.13E + 11 | < 0.001 | − 6.51E + 04 | < 0.001 | − 2.69E + 04 | 0.02 |
| MOI | 2.44E + 09 | 0.21 | −7.05E + 02 | 0.09 | 9.98E + 02 | < 0.001 |
| TOI | 1.08E + 09 | 0.29 | 3.45E + 03 | < 0.001 | 1.06E + 03 | < 0.001 |
| pH | 4.56E + 10 | < 0.001 | 9.75E + 03 | < 0.001 | 4.09E + 03 | 0.02 |
| MOI*MOI | 1.53E + 07 | 0.72 | − 6.52E−01 | 0.89 | 6.70E + 00 | 0.03 |
| TOI*TOI | 8.32E + 07 | 0.22 | 1.76E + 00 | 0.81 | 8.78E + 00 | – |
| MOI*TOI | 3.04E + 07 | 0.42 | 1.10E + 01 | 0.03 | − 1.75E + 02 | < 0.001 |
| MOI*pH | 4.46E + 08 | 0.81 | 8.08E + 01 | 0.70 | − 1.66E + 02 | 0.09 |
| TOI*pH | 2.73E + 06 | 1.00 | − 5.27E + 02 | 0.04 | − 2.69E + 04 | 0.18 |
| Regression | – | 0.01 | – | 0.00 | – | 0.00 |
| Lack of fit | – | 0.38 | – | 0.42 | – | 0.08 |
a TOI: time of infection, MOI: multiplicity of infection
b CSVY: cell-specific virus yield
c Fold: adenovirus fold expansion
Fig. 5The model analysis of DoE experiment. The summary of fit and coefficients for titer (a, b), CSVY (c, d) and Fold (e, f)
Fig. 6rAd-HZ production in a bioreactor with process parameters under robust setpoint conditions. A cell growth curve (a), metabolic curves (b, c), and rAd-HZ yield (d). The arrow indicates the time of infection