| Literature DB >> 35564493 |
Farrukh Saleem1, Abdullah Saad Al-Malaise Al-Ghamdi1, Madini O Alassafi2, Saad Abdulla AlGhamdi3.
Abstract
COVID-19 is a disease caused by SARS-CoV-2 and has been declared a worldwide pandemic by the World Health Organization due to its rapid spread. Since the first case was identified in Wuhan, China, the battle against this deadly disease started and has disrupted almost every field of life. Medical staff and laboratories are leading from the front, but researchers from various fields and governmental agencies have also proposed healthy ideas to protect each other. In this article, a Systematic Literature Review (SLR) is presented to highlight the latest developments in analyzing the COVID-19 data using machine learning and deep learning algorithms. The number of studies related to Machine Learning (ML), Deep Learning (DL), and mathematical models discussed in this research has shown a significant impact on forecasting and the spread of COVID-19. The results and discussion presented in this study are based on the PRISMA (Preferred Reporting Items for Systematic Reviews and Meta-Analyses) guidelines. Out of 218 articles selected at the first stage, 57 met the criteria and were included in the review process. The findings are therefore associated with those 57 studies, which recorded that CNN (DL) and SVM (ML) are the most used algorithms for forecasting, classification, and automatic detection. The importance of the compartmental models discussed is that the models are useful for measuring the epidemiological features of COVID-19. Current findings suggest that it will take around 1.7 to 140 days for the epidemic to double in size based on the selected studies. The 12 estimates for the basic reproduction range from 0 to 7.1. The main purpose of this research is to illustrate the use of ML, DL, and mathematical models that can be helpful for the researchers to generate valuable solutions for higher authorities and the healthcare industry to reduce the impact of this epidemic.Entities:
Keywords: basic reproduction rate; deep learning; epidemiology of COVID-19; machine learning
Mesh:
Year: 2022 PMID: 35564493 PMCID: PMC9099605 DOI: 10.3390/ijerph19095099
Source DB: PubMed Journal: Int J Environ Res Public Health ISSN: 1660-4601 Impact factor: 4.614
Figure 1Study Selection Workflow based on PRISMA.
Figure 2Selected Studies Publishing Journals.
Figure 3Region of Selected Studies.
Classification of Selected Research Articles.
| Research Domain Classification | Authors |
|---|---|
| Automatic Detection | [ |
| Estimation of Disease-Related Factors | [ |
| Impact of Quarantine and Traveling | [ |
| Reporting on COVID-19 Numbers | [ |
| Virus Reproduction and Doubling Time | [ |
Figure 4Research Domain Classification.
Figure 5Types of Modeling in Selected Studies.
Number of Articles and Types of Modeling in Selected Studies.
| Types of Modeling | Authors |
|---|---|
| Deep Learning Models | [ |
| Machine Learning Models | [ |
| Others (Regression and Mathematical Models) | [ |
Figure 6Ratio of ML Models in Selected Studies.
Figure 7Ratio of DL Models in Selected Studies.
Figure 8Ratio of Mathematical and Regression Models in Selected Studies.
Figure 9Ratio of Validation Strategies in Selected Studies.
Figure 10List of Evaluation Metrics used in the Selected Studies.
Epidemic Doubling Time in Selected Studies.
| Author | Country | Method | Dataset | Doubling Time | Tool Used | Recommendation by Author |
|---|---|---|---|---|---|---|
| [ | India | Exponential Growth Model | February 2020–March 2021 | 1.7 to 46.2 days (based on districts) | Q-GIS software | no uniformity across country |
| [ | China | Global Epidemic and Mobility Model (GLEAM) | By 23 January 2020 | 4.2 days | - | travel restrictions |
| [ | Multi-Countries | Linear Regression and Support Vector Machine | 22 January 2020, to 12 July 2021 | Min = if (5000 cases) double in 5 days | - | government and individuals aware about the severity |
| [ | China | Exponential Growth Model | 1–23 January 2020 | 3.6 days | - | prevention measures were effective |
| [ | South Africa | Susceptible–Exposed– | By 23 November 2021 | 3.3 days | - | immune evasion is more concerning |
| [ | Argentina | Agent-based Model | Multiple Scenario | 2.0 to 7.14 days | social distancing measures |
Epidemic Basic Reproduction Number in Selected Studies.
| Author | Country | Dataset | Basic | Method | Confidence Interval (CI) | Tool Used |
|---|---|---|---|---|---|---|
| [ | China | 1–15 January 2020 | 2.56 | Exponential Growth Model | 95% CI | - |
| [ | India | February 2020–March 2021 | 0 to > 7 (based on district) | Exponential Growth Model | - | Q-GIS software |
| [ | USA | 21 January 2020–21 June 2020 | 2.3 to 7.1 (based on different states) | Bayesian inference | 95% CI | PyBioNetFit |
| [ | Spain | March–April 2020 | 0.48 to 5.89 (different conditions) | SIR (Susceptible-Infected-Recovered) | 95% CI | - |
| [ | USA | 22 January 2020–10 August 2020 | 2.747 to 3.856 (increase as days increase) | Mathematical Epidemic Model (MEM) + DL | - | MATLAB |
| [ | Morocco | 22 January 2020–22 November 2020 | 0.9 and 1.3 (increase as days increase) | Auto-Regressive Integrated Moving Average (ARIMA) and Long short-term memory (LSTM) | 95% CI | Python |
| [ | China | By 23 January 2020 | 2.57 | Global Epidemic and Mobility Model (GLEAM) | 90% CI | - |
| [ | China | 1–23 January 2020 | 4.2 | Exponential Growth Model | 95% CI | - |
| [ | Malaysia | 1 February 2020–8 November 2020 | 3.96 | Susceptible-Exposed-Infectious-Removed (SEIR) Model | 95% CI | Excel |
| [ | China, USA | By 10 February 2020 | 0.023 (China) | Retrospective Regression Analysis | 95% CI | Python |
| [ | USA | 8 March–12 April | 3.96 | Linear Regression | 95% CI | - |
| [ | USA | By 16 April 2020 | 3.81 to 4.07 (based on method) | SIR (Susceptible-Infected-Recovered) | 95% CI | - |