| Literature DB >> 35558619 |
Imran Ali1,2, Sofi Danish Mukhtar1, Ming Fa Hsieh3, Zeid A Alothman4, Abdulrahman Alwarthan4.
Abstract
Facile synthesis of micellar "nano" indole heterocyclic anti-cancer compounds is described. The synthesized compounds (11-23) were characterized by UV-VIS, 1H NMR, FT-IR and mass spectroscopy. The binding energies of DNA-compound adducts varied from -20.08 to -23.85 kJ mol-1, and they were stabilized by hydrophobic interactions and H-bonding. The synthesized compounds enter into minor grooves of DNA during adduct formation. The DNA binding constant of compounds 11-23 was 1.00 to 2.00 × 105 M-1. The drug-loading efficiency and drug-loading content in their micellar forms were recorded. Compounds 11, 12, 14 and 19 at a micellar concentration of 670 μL mL-1 displayed excellent anticancer activities against the HepG2/C3A line (25-50%). The potency of nano anticancer drugs was predicted by drug likeness using Lipinski's "rule of five". Taken together, compounds 11-23 could be used to treat cancers. This journal is © The Royal Society of Chemistry.Entities:
Year: 2018 PMID: 35558619 PMCID: PMC9089882 DOI: 10.1039/c8ra07060a
Source DB: PubMed Journal: RSC Adv ISSN: 2046-2069 Impact factor: 4.036
Fig. 1Chemical structures of indole-3-carboxaldehyde, indole-2-carboxaldehyde and indole-3-carboxylic acid.
Scheme 1Synthesis of indole derivatives.
Docking parameters of compounds 11–23
| Compound | Binding energy KJ mol−1 | No. of H-bonds | Residues involved in H-bonding (bond length) | Residues involved in hydrophobic interactions |
|---|---|---|---|---|
| 11 | −20.50 | 3 | A: DT′8H:Unk0:O of nitro group (3.55) | Dt8, Dc9, Dg10, Dg14 & Dc15 |
| B: DG′10H : Unk0:N of C | ||||
| C: DC′15H:Unko:N of morpholine group (3.48) | ||||
| 12 | −21.34 | 2 | A: DG′14H:Unk0:N of C | Dt8, Dc9, Dg10, Dc13, Dg14, Dc15 & Dg16 |
| B: DG′10H:Unk0:O of nitro group (3.39) | ||||
| 13 | −22.59 | 2 | A: DG′14H:Unk0:O of morpholine group (3.36) | Dt8, Dc9, Dg10, Dg14, Dc15 & Dg16 |
| B: DG′10H:Unk0:N of C | ||||
| 14 | −22.59 | 1 | A: DG′10H:Unk0:Nof morpholine group (3.51) | Dt8, Dc9, Dg10, Dc13, Dg14, Dc15 & Dg16 |
| 15 | −23.85 | 1 | A: DG′10H:Unk0:Nof morpholine group (3.49) | Dt8, Dc9, Dg10, Dg14 & Dc15 |
| 16 | −20.50 | 2 | A: DC′13H:Unk0:O of methoxy group (3.39) | Dt8, Dc9, Dg10, Dc13, Dg14, Dc15 & Dg16 |
| B: DG′14H:Unko:O of morpholine group (3.44) | ||||
| 17 | −20.92 | 1 | A: DG′10H:Unk0:N of C | Dt8, Dc9, Dg10, Dc13, Dg14, Dc15 & Dg16 |
| 18 | −21.34 | 2 | A: DG′14H:Unk0:N of C | Dt8, Dc9, Dg10, Dc13, Dg14, Dc15 & Dg16 |
| B: DG′10H:Unk0:N of indole group (3.40) | ||||
| 19 | −20.08 | 2 | A: DG′10H:Unk0:N of C | Dt8, Dc9, Dg10, Dc13, Dg14 & Dc15 |
| B: DC′13H : Unk0:O of nitro group (3.24) | ||||
| 20 | −20.92 | 2 | A: DG′10H : Unk0:N of C | Dt8, Dc9, Dg10, Dc13, Dg14 & Dc15 |
| B: DG′14H:Unk0:N of indole group (3.46) | ||||
| 21 | −20.92 | 1 | A: DC′9H:Unk0:N of indole group (3.57) | Dt8, Dc9, Dg10, Dc13, Dg14, Dc15 & Dg16 |
| 22 | −21.34 | 1 | A: DC′9H:Unk0:N of indole group (3.58) | Dt8, Dc9, Dg10, Dc13, Dg14 & Dc15 |
| 23 | −20.92 | 2 | A: DC′14H:Unk0:N of C | Dt8, Dc9, Dg10, Dc13, Dg14 & Dc15 |
| B: DG′10H:Unk0:N of indole group (3.28) |
Fig. 2(a–c) Absorption spectra of compounds 11, 21 and 23 in the absence and presence of different Ct-DNA concentrations. Arrows indicate the decrease in absorbance upon addition of decreasing concentrations of DNA. Inset: plots of [DNA]/εbvs. [DNA] for the absorption titration of Ct-DNA with compounds. DNA concentrations are (1) 5.15 × 10−5, (2) 3.0 × 10−5, (3) 1.00 × 10−5, (4) 0.9 × 10−5, and (5) 0.7 × 10−5.
Wavelength shifts, %hypochromism and binding constants of compounds 11–23
| Compound |
|
| Change | %hypochromism |
|
|---|---|---|---|---|---|
| 11 | 300 nm | 260 nm | 40 | 39.29 | 2.0 × 105 |
| 12 | 261 nm | 262 nm | 1 | 0.72 | 1.0 × 105 |
| 13 | 261 nm | 260 nm | 1 | 0.22 | 1.0 × 105 |
| 14 | 255 nm | 257 nm | 2 | 9.11 | 1.125 × 105 |
| 15 | 255 nm | 255 nm | 0 | 0.34 | 1.125 × 105 |
| 16 | 256 nm | 255 nm | 1 | 3.28 | 1.111 × 105 |
| 17 | 261 nm | 258 nm | 3 | 6.69 | 1.125 × 105 |
| 18 | 262 nm | 264 nm | 2 | 4.53 | 1.111 × 105 |
| 19 | 260 nm | 260 nm | 0 | 0.46 | 1.0 × 105 |
| 20 | 264 nm | 258 nm | 6 | 0.41 | 1.125 × 105 |
| 21 | 260 nm | 261 nm | 1 | 4.17 | 1.0 × 105 |
| 22 | 258 nm | 256 nm | 2 | 5.89 | 1.25 × 105 |
| 23 | 259 nm | 260 nm | 1 | 5.03 | 1.111 × 105 |
% hypochromicity (H%) = [(Af − Ab)/Af] × 100, where Af and Ab represent the absorbance of free and bound compounds.
Binding constants.
DLC and DLE values of compounds 11–23
| Compound | DLC | DLE/EE |
|---|---|---|
| 11 | 5.42% | 54.2% |
| 12 | 2.44% | 24.4% |
| 13 | 4.52% | 45.2% |
| 14 | 3.54% | 35.4% |
| 15 | 0.58% | 5.8% |
| 16 | 3.30% | 33.0% |
| 17 | 0.33% | 3.28% |
| 18 | 4.10% | 41.0% |
| 19 | 1.44% | 14.4% |
| 20 | 4.87% | 48.7% |
| 21 | 3.53% | 35.3% |
| 22 | 4.79% | 47.9% |
| 23 | 3.17% | 31.7% |
Fig. 3Percentage viabilities of HepG2/C3A cells upon treatment with compounds 11–23 at micellar concentrations of 6.7, 67, 134, 335 and 670 μL mL−1.
Fig. 4Percentage viabilities of HepG2/C3A cells upon treatment with compounds 11–23 at micellar concentrations of 0.1, 1.0, 10, 50 and 100 μg mL−1.
IC50 values of drugs in micelles in the HepG2/C3A line
| Compounds | IC50 (μg mL−1) |
|---|---|
| 11 | 3.85 |
| 12 | 2.03 |
| 13 | 3.30 |
| 14 | 1.91 |
| 16 | 5.28 |
| 17 | 3.27 |
| 18 | 3.66 |
| 19 | 1.63 |
| 20 | 4.29 |
| 22 | 18.7 |
| 23 | 7.28 |
Fig. 5Morphology of HepG2 cells (a) before treatment and (b) after treatment with nano drugs.
Lipinski's ‘rule-of-five’ data for compounds 11–23
| Compounds | Mol. wt | No. of HBA | No. of HBD | Mol log | Mol log | Mol PSA (A2) | Mol vol (A3) |
|---|---|---|---|---|---|---|---|
| 11 | 365.16 | 5 | 1 | 2.74 | −5.78(0.61) | 61.69 | 352.50 |
| 12 | 397.08 | 3 | 0 | 4.00 | −6.43(0.15) | 23.43 | 344.16 |
| 13 | 337.16 | 3 | 0 | 3.42 | −5.80(0.53) | 23.43 | 328.22 |
| 14 | 349.18 | 4 | 0 | 3.12 | −5.24(2.02) | 30.37 | 354.43 |
| 15 | 333.18 | 3 | 0 | 3.43 | −5.71(0.65) | 22.73 | 342.94 |
| 16 | 349.18 | 4 | 0 | 3.24 | −5.54(1.00) | 30.98 | 354.14 |
| 17 | 333.18 | 3 | 0 | 3.55 | −5.74(0.61) | 23.43 | 343.24 |
| 18 | 353.13 | 3 | 0 | 3.86 | −6.24(0.20) | 23.43 | 339.50 |
| 19 | 378.19 | 5 | 1 | 2.80 | −5.39(1.56) | 57.26 | 377.68 |
| 20 | 350.19 | 3 | 0 | 3.47 | −5.41(1.37) | 19.00 | 353.40 |
| 21 | 362.21 | 4 | 0 | 3.17 | −4.84(5.18) | 25.93 | 379.61 |
| 22 | 346.22 | 3 | 0 | 3.60 | −5.35(1.56) | 19.00 | 368.42 |
| 23 | 366.16 | 3 | 0 | 3.92 | −5.85(0.52) | 19.00 | 364.68 |