| Literature DB >> 35549671 |
Moritz Schäfer1, Karunia Putra Wijaya2, Robert Rockenfeller2, Thomas Götz2.
Abstract
BACKGROUND: COVID-19 continues to disrupt social lives and the economy of many countries and challenges their healthcare capacities. Looking back at the situation in Germany in 2020, the number of cases increased exponentially in early March. Social restrictions were imposed by closing e.g. schools, shops, cafés and restaurants, as well as borders for travellers. This reaped success as the infection rate descended significantly in early April. In mid July, however, the numbers started to rise again. Of particular reasons was that from mid June onwards, the travel ban has widely been cancelled or at least loosened. We aim to measure the impact of travellers on the overall infection dynamics for the case of (relatively) few infectives and no vaccinations available. We also want to analyse under which conditions political travelling measures are relevant, in particular in comparison to local measures. By travel restrictions in our model we mean all possible measures that equally reduce the possibility of infected returnees to further spread the disease in Germany, e.g. travel bans, lockdown, post-arrival tests and quarantines.Entities:
Keywords: BIC; COVID-19; Disease dynamics; Epidemiology; Metropolis algorithm; Parameter estimation; Reproduction number; SEIRD-model; Sensitivity analysis; Travellers
Mesh:
Year: 2022 PMID: 35549671 PMCID: PMC9096785 DOI: 10.1186/s12879-022-07396-1
Source DB: PubMed Journal: BMC Infect Dis ISSN: 1471-2334 Impact factor: 3.667
Fig. 1Daily confimed cases (left) and cumulative confirmed cases (right) with COVID-19 in Germany from January 26 until August 31, 2020 according to Johns Hopkins University
Fixed parameter values for the population as well as the (estimated) number of Germans travelling to the respective country j, namely , per month in summer 2020 and the transmission parameters by application of Eq. (4)
| Country | Population | Travellers | Transmission | |||
|---|---|---|---|---|---|---|
| June | July | August | ||||
| Decimal power/unit | 10 | 1 | 1 | 1 | 10 | 10 |
| Albania | 2.88 | 945 | 3366 | 9505 | 1.20 | 1.19 |
| Austria | 8.90 | 312,364 | 636,414 | 782,818 | 1.35 | 1.36 |
| Belarus | 9.45 | 1595 | 1985 | 3102 | 0.38 | 0.65 |
| Belgium | 11.51 | 36,210 | 155,295 | 92,495 | 1.17 | 1.60 |
| Bosnia and Herzegovina | 3.30 | 2811 | 2849 | 6702 | 1.54 | 1.10 |
| Brazil | 211.05 | 6715 | 4366 | 3778 | 1.22 | 1.12 |
| Bulgaria | 6.95 | 11,562 | 42,552 | 74,363 | 1.24 | 1.06 |
| Canada | 37.41 | 4746 | 9778 | 8368 | 0.31 | 1.33 |
| China | 1433.78 | 3711 | 5921 | 7077 | 1.55 | 1.05 |
| Croatia | 4.06 | 66,029 | 84,952 | 150,790 | 0.31 | 1.10 |
| Cyprus | 0.89 | 360 | 7191 | 14,049 | 0.42 | 1.89 |
| Czech Republic | 10.69 | 51,518 | 130,651 | 148,353 | 0.84 | 1.41 |
| Denmark | 5.81 | 48,986 | 395,924 | 571,649 | 0.77 | 1.70 |
| Egypt | 100.39 | 2542 | 5134 | 7790 | 0.65 | 0.36 |
| Estonia | 1.33 | 1006 | 3380 | 5967 | 0.23 | 2.00 |
| Ethiopia | 112.08 | 1431 | 2089 | 2066 | 1.84 | 1.45 |
| Finland | 5.53 | 4624 | 12,134 | 19,074 | 0.31 | 1.74 |
| France | 67.20 | 105,905 | 326,298 | 345,913 | 0.95 | 1.96 |
| Greece | 10.7 | 15,930 | 179,531 | 372,892 | 1.41 | 1.75 |
| Hungary | 9.77 | 30,154 | 53,080 | 71,577 | 0.36 | 1.71 |
| Iceland | 0.34 | 889 | 7892 | 13,718 | 1.66 | 1.56 |
| Ireland | 4.97 | 4892 | 8965 | 9065 | 0.43 | 2.20 |
| India | 1366.42 | 5168 | 8676 | 14,046 | 1.39 | 1.25 |
| Israel | 88.52 | 2455 | 2693 | 797 | 1.65 | 1.23 |
| Italy | 60.29 | 126,855 | 272,324 | 415,581 | 0.21 | 1.75 |
| Japan | 126.86 | 1457 | 2340 | 3292 | 1.78 | 1.29 |
| Kosovo | 1.72 | 586 | 7341 | 18,626 | 1.59 | 1.10 |
| Latvia | 1.91 | 5936 | 12,637 | 20,798 | 0.31 | 1.52 |
| Lebanon | 6.87 | 167 | 1699 | 5298 | 1.09 | 1.94 |
| Lithuania | 2.79 | 1203 | 1787 | 2415 | 0.49 | 1.89 |
| Luxembourg | 0.63 | 4562 | 4466 | 2946 | 2.54 | 0.51 |
| Malta | 0.51 | 261 | 9338 | 16,974 | 1.16 | 1.95 |
| Mexico | 127.58 | 2079 | 2726 | 2253 | 1.70 | 0.69 |
| Montenegro | 0.63 | 728 | 2490 | 4118 | 3.75 | 0.54 |
| Moldova | 4.04 | 972 | 1728 | 3815 | 0.85 | 1.30 |
| Netherlands | 17.40 | 188,840 | 721,721 | 1,592,831 | 1.04 | 1.72 |
| Northern Macedonia | 2.08 | 0 | 3486 | 9875 | 0.89 | 1.02 |
| Norway | 5.37 | 8326 | 42,589 | 64,125 | 0.74 | 1.70 |
| Poland | 27.94 | 95,372 | 171,127 | 268,559 | 0.52 | 1.51 |
| Portugal | 10.29 | 17,659 | 63,369 | 111,867 | 0.51 | 0.81 |
| Qatar | 2.83 | 6063 | 8336 | 6747 | 0.79 | 1.00 |
| Romania | 19.36 | 5702 | 32,822 | 41,255 | 1.18 | 1.35 |
| Russia | 145.87 | 3550 | 6017 | 7324 | 0.61 | 1.03 |
| Serbia | 8.77 | 5164 | 5577 | 9672 | 1.62 | 0.61 |
| Slovakia | 5.46 | 19,372 | 31,161 | 56,401 | 1.16 | 1.54 |
| Slovenia | 2.07 | 3759 | 5361 | 5987 | 1.44 | 1.14 |
| Spain | 47.32 | 22,209 | 331,894 | 436,624 | 1.19 | 1.86 |
| Sweden | 10.32 | 9050 | 39,584 | 46,878 | 0.38 | 0.55 |
| Switzerland | 8.50 | 102,698 | 272,121 | 388,971 | 1.49 | 1.35 |
| Tunisia | 11.69 | 644 | 2709 | 11,292 | 1.09 | 2.12 |
| Turkey | 83.43 | 36,986 | 144,350 | 343,972 | 0.77 | 1.14 |
| United Kingdom | 66.43 | 17,026 | 29,925 | 32,969 | 0.92 | 1.16 |
| Ukraine | 43.99 | 3020 | 8934 | 14,759 | 0.77 | 1.44 |
| United States of America | 329.06 | 24,123 | 42,409 | 41,613 | 0.81 | 1.62 |
| United Arab Emirates | 9.77 | 3231 | 9394 | 6856 | 0.59 | 1.10 |
Used parameter values
| Parameter | Value | References |
|---|---|---|
| 83,019,213 | [ | |
| (3 d | [ | |
| (10 d | [ |
Parameter constraints with the respective constraints of the fitted parameters
| 82,846,340 | 9, | 165, | 8555 |
Orders of magnitude of the initial values for adapting the model to the available data
| Param. | ||||||
|---|---|---|---|---|---|---|
| Init. val. | 0.1 | 0.3 | 0.005 | 20 | 1 |
Fig. 2Estimation of cumulated infections in Germany compared to Johns Hopkins University from 1 June to 31 August with two piecewise constant values of the transmission rate , on the left side the number of infections, on the right side the death cases. Note that, for better visibility, the y-axis does not include 0
Values for the least-square value J(u) and the BIC for the various models
| # of Parameters | BIC | ||
|---|---|---|---|
| Model A | 6 | − 9087.0 | |
| Model B | 6 | − 8538.6 | |
| Model C | 8 | − 8529.9 |
Numerical results for Model A without inclusion of
| Parameter | Mean value | |
|---|---|---|
Numerical Results for Model B using a constant value of
| Parameter | Mean value | |||
|---|---|---|---|---|
| 2.97 | 0.06 | 0.002 | 0.04 |
Fig. 3Estimation of cumulated infections in Germany compared to Johns Hopkins University from 1 June to 31 August with a constant impact rate , on the left side the number of infections, on the right side the death cases. Note that, for better visibility, the y-axis does not include 0. The (barely visible) shaded area represents the range of the solutions from the SACI and the dashed line describes the simulation with , i.e. either no travelling is allowed or the traveller compartment had been completely free of the disease
Numerical results for piecewise constant values of
| Parameter | Mean value | |||
|---|---|---|---|---|
| 2.23 | 0.05 | 0.002 | 0.06 | |
| 2.45 | 0.05 | 0.008 | 0.02 | |
| 3.14 | 0.05 | 0.004 | 0.11 |
Fig. 4Estimation of cumulated infections in Germany compared to Johns Hopkins University from 1 June to 31 August with three piecewise constant travel impact rates , on the left side the number of infections, on the right side the death cases. The shaded area represents the SACI interval. The dashed line describes the simulation with , i.e. either no travelling is allowed or the traveller compartment had been completely free of the disease
Fig. 5Reproductive values for the measured infection values, Model B (red) and Model C (green). Additionally, the dotted lines show the evolution of the reproductive values in case travellers had no impact on the infections in Germany
Fig. 6Sensitivities of the model states with respect to its parameters, using a time-independent travel impact rate
Fig. 7Comparison of the elasticities in a domain of interest for the transmission rate and the travel impact rate . The area shows the contour of the elasticity in the left-hand side of Eq. (31) minus the right-hand side expression. The region below the zero-line thus indicates all possible locations of at which the measure as in Eq. (30) is more sensitive to than to , and vice versa