Literature DB >> 35549144

DNA Conformation Dictates Strength and Flocculation in DNA-Microtubule Composites.

Karthik R Peddireddy1, Davide Michieletto2,3, Gina Aguirre1, Jonathan Garamella1, Pawan Khanal1, Rae M Robertson-Anderson1.   

Abstract

Polymer topology has been shown to play a key role in tuning the dynamics of complex fluids and gels. At the same time, polymer composites, ubiquitous in everyday life, have been shown to exhibit emergent desirable mechanical properties not attainable in single-species systems. Yet, how topology impacts the dynamics and structure of polymer composites remains poorly understood. Here, we create composites of rigid rods (microtubules) polymerized within entangled solutions of flexible linear and ring polymers (DNA) of equal length. We couple optical tweezers microrheology with confocal microscopy and scaled particle theory to show that composites with linear DNA exhibit a strongly nonmonotonic dependence of elasticity and stiffness on microtubule concentration due to depletion-driven polymerization and flocculation of microtubules. In contrast, composites containing ring DNA show a much more modest monotonic increase in elastic strength with microtubule concentration, which we demonstrate arises from the decreased conformational size and increased miscibility of rings.

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Year:  2021        PMID: 35549144      PMCID: PMC9239750          DOI: 10.1021/acsmacrolett.1c00638

Source DB:  PubMed          Journal:  ACS Macro Lett        ISSN: 2161-1653            Impact factor:   7.015


  29 in total

1.  Celebrating Soft Matter's 10th Anniversary: Topology matters: structure and dynamics of ring polymers.

Authors:  D Richter; S Goossen; A Wischnewski
Journal:  Soft Matter       Date:  2015-11-28       Impact factor: 3.679

2.  Co-Entangled Actin-Microtubule Composites Exhibit Tunable Stiffness and Power-Law Stress Relaxation.

Authors:  Shea N Ricketts; Jennifer L Ross; Rae M Robertson-Anderson
Journal:  Biophys J       Date:  2018-08-16       Impact factor: 4.033

3.  Unexpected entanglement dynamics in semidilute blends of supercoiled and ring DNA.

Authors:  Karthik R Peddireddy; Megan Lee; Yuecheng Zhou; Serenity Adalbert; Sylas Anderson; Charles M Schroeder; Rae M Robertson-Anderson
Journal:  Soft Matter       Date:  2019-11-27       Impact factor: 3.679

Review 4.  Adsorption and flocculation by polymers and polymer mixtures.

Authors:  John Gregory; Sandor Barany
Journal:  Adv Colloid Interface Sci       Date:  2011-06-28       Impact factor: 12.984

5.  Miscibility phase diagram of ring-polymer blends: A topological effect.

Authors:  Takahiro Sakaue; Chihiro H Nakajima
Journal:  Phys Rev E       Date:  2016-04-21       Impact factor: 2.529

6.  Unexpected power-law stress relaxation of entangled ring polymers.

Authors:  M Kapnistos; M Lang; D Vlassopoulos; W Pyckhout-Hintzen; D Richter; D Cho; T Chang; M Rubinstein
Journal:  Nat Mater       Date:  2008-10-26       Impact factor: 43.841

7.  Conformational properties of blends of cyclic and linear polymer melts.

Authors:  Gopinath Subramanian; Sachin Shanbhag
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2008-01-14

Review 8.  The Cytoskeleton-A Complex Interacting Meshwork.

Authors:  Tim Hohmann; Faramarz Dehghani
Journal:  Cells       Date:  2019-04-18       Impact factor: 6.600

Review 9.  Colloid osmotic parameterization and measurement of subcellular crowding.

Authors:  T J Mitchison
Journal:  Mol Biol Cell       Date:  2019-01-15       Impact factor: 4.138

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  2 in total

1.  Topological digestion drives time-varying rheology of entangled DNA fluids.

Authors:  D Michieletto; P Neill; S Weir; D Evans; N Crist; V A Martinez; R M Robertson-Anderson
Journal:  Nat Commun       Date:  2022-07-28       Impact factor: 17.694

2.  Optical-Tweezers-integrating-Differential-Dynamic-Microscopy maps the spatiotemporal propagation of nonlinear strains in polymer blends and composites.

Authors:  Karthik R Peddireddy; Ryan Clairmont; Philip Neill; Ryan McGorty; Rae M Robertson-Anderson
Journal:  Nat Commun       Date:  2022-09-02       Impact factor: 17.694

  2 in total

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