| Literature DB >> 35546877 |
Inés González-Calvo1, Mélissa Cizeron2, Jean-Louis Bessereau2, Fekrije Selimi1.
Abstract
The appearance of synapses was a crucial step in the creation of the variety of nervous systems that are found in the animal kingdom. With increased complexity of the organisms came a greater number of synaptic proteins. In this review we describe synaptic proteins that contain the structural domains CUB, CCP, or TSP-1. These domains are found in invertebrates and vertebrates, and CUB and CCP domains were initially described in proteins belonging to the complement system of innate immunity. Interestingly, they are found in synapses of the nematode C. elegans, which does not have a complement system, suggesting an ancient function. Comparison of the roles of CUB-, CCP-, and TSP-1 containing synaptic proteins in various species shows that in more complex nervous systems, these structural domains are combined with other domains and that there is partial conservation of their function. These three domains are thus basic building blocks of the synaptic architecture. Further studies of structural domains characteristic of synaptic proteins in invertebrates such as C. elegans and comparison of their role in mammals will help identify other conserved synaptic molecular building blocks. Furthermore, this type of functional comparison across species will also identify structural domains added during evolution in correlation with increased complexity, shedding light on mechanisms underlying cognition and brain diseases.Entities:
Keywords: CCP; CUB; TSP-1; invertebrates; molecular conservation; synapse; vertebrates
Year: 2022 PMID: 35546877 PMCID: PMC9083331 DOI: 10.3389/fnins.2022.866444
Source DB: PubMed Journal: Front Neurosci ISSN: 1662-453X Impact factor: 5.152
FIGURE 1CCP, CUB, and TSP-1 domains. (A) Three-dimensional structure of a CCP domain (from rat GABA B Receptor 1a (Blein et al., 2004), PBD id:1srz), a CUB domain (from human tumor necrosis factor-inducible gene 6 protein (Briggs et al., 2015), PDB id: 2wno), a TSP-1 domain (from rat F-spondin (Pääkkönen et al., 2006), PDB id: 1szl) and a IG domain (from mouse NCAM (Jensen et al., 1999), PDB id: 3ncm). Adapted from ebi.ac.uk/pdbsum (B) For each domain, an example is given (top sequence: β-2-glycoprotein 1 from Bos Taurus (PGCA_BOVIN/1-5) for the CCP domain; bone morphogenetic protein 1 from Homo sapiens (BMP1_HUMAN/1-1) for the CUB domain and Properdin from Homo sapiens (PROP_HUMAN/2-0) for the TSP-1 domain), as well as the consensus terms (80%, bottom sequence). Adapted from smart.embl.de. (C) Number and percentage of proteins containing CCP, CUB, or TSP-1 domains (green, red and purple, respectively, right) for different species ordered via a phylogenetic tree (left). Data from SMART genomic mode domain evolution (smart.embl.de) and the interactive Tree of Life (itol.embl.de).
FIGURE 2CCP, CUB, and TSP-1 domain-containing proteins with known synaptic functions in C. elegans, D. melanogaster and M. musculus. Domain structure is indicated for each protein and proteins are grouped depending on their CCP, CUB, and/or TSP-1 domain content. * indicates a 1:2 scale for the protein.
FIGURE 3CCP-, CUB-, and TSP-1-domain containing proteins in C. elegans and in mammalian synapses. (A) In C. elegans, the three classes of proteins are found in cholinergic neuromuscular junctions and play different functions in synapse specification (MADD-4) and receptor clustering (LEV-9 and LEV-10). (B) In M. musculus, the three domains are found either alone (SUSD4, NETO1, …) or in combination (CSMD1, BAI3) in proteins of excitatory synapses. (C) The C1Q domain, absent in C. elegans, is found in proteins that specify two different types of excitatory synapses made on a single target, the Purkinje cell.