| Literature DB >> 35543701 |
William A Murphy1, Nan Lin2, Amy Damask1, Gregory G Schwartz3, P Gabriel Steg4, Michael Szarek3,5,6, Poulabi Banerjee2, Sergio Fazio2, Garen Manvelian2, Robert Pordy2, Alan R Shuldiner2, Charles Paulding2.
Abstract
BACKGROUND: Statin-associated muscle symptoms (SAMS) are the most frequently reported adverse events for statin therapies. Previous studies have reported an association between the p.Val174Ala missense variant in SLCO1B1 and SAMS in simvastatin-treated subjects; however, evidence for genetic predictors of SAMS in atorvastatin- or rosuvastatin-treated subjects is currently lacking.Entities:
Keywords: acute coronary syndrome; atorvastatin; creatine kinase; drug-related side effects and adverse reactions; genome-wide association study; pharmacogenetics; rosuvastatin calcium
Mesh:
Substances:
Year: 2022 PMID: 35543701 PMCID: PMC9213083 DOI: 10.1161/CIRCGEN.121.003503
Source DB: PubMed Journal: Circ Genom Precis Med ISSN: 2574-8300
Demographics and Baseline Characteristics of ODYSSEY OUTCOMES Subjects and Those Included in Pharmacogenomic Analysis: Distribution Among Phenotypes
Figure 1.Manhattan and locus plot of baseline statin intolerance or investigator-documented statin-associated muscle symptoms (SAMS) during treatment period exome-wide association study (ExWAS)/genome-wide association study (GWAS; cases=894; controls=9723). A, Manhattan plot with the y axis representing−log10 P values derived from logistic regression analysis of 8 921 030 genetic variants. The x axis represents chromosome and position (build GRCh38). The top associated locus in TMEM9 (rs6667912, P=3.71×10−8) is labeled. The dotted line represents the genome-wide significance cutoff (P<5×10−8). B, Locus plot of top ExWAS/GWAS association rs6667912 (TMEM9) with baseline statin intolerance or SAMS during the treatment period. A missense variant in IGFN1 (p.Arg102His) with modest association (P=2.49×10−5) was a finding independent from the top association (rs6667912) and is also labeled. Rs6667912 (TMEM9) is located ≈30 kb 5′ of CACNA1S (locus previously associated with severe SAMS). Several modest associations (P<1×10−3) were also reported in the CACNA1S locus. The dotted line represents the genome-wide significance cutoff (P<5×10−8). SNP indicates single-nucleotide polymorphism.
Top Associated Loci for the ExWAS/GWAS of Baseline Statin Intolerance or Investigator-Documented SAMS During the Treatment Period
Top Associated Exonic Loci for ExWAS of Baseline Statin Intolerance or Investigator-Documented SAMS During the Treatment Period
Figure 2.Manhattan plot and locus plot of maximum creatine kinase (CK) during treatment period exome-wide association study (ExWAS)/GWAS (n=9630). A, Manhattan plot with the y axis representing−log10 P values derived from linear regression analysis of 8 921 030 genetic variants. The x axis represents chromosome and position (build GRCh38). The top associated loci in LINC00393 (rs7993814, P=9.77×10−9) and LILRB5 (rs12986064, P=7.64×10−8; p.Asp247Gly, P=8.68×10−8) are labeled. The dotted line represents the genome-wide significance cutoff (P<5×10−8). B, Locus plot of top association (rs7993814, LINC00393) and variants previously associated with CK levels in statin and nonstatin users (rs9600129, LINC00393; rs7318906, LINC00393). Both rs9600129 (r2=0.61) and rs7318906 (r2=0.48) are in modest linkage disequilibrium (LD) with the top association/reference variant (rs7993814). The top variant (rs7993814) is located ≈80 kb 3′ of KLF12. Both rs7993814 and rs9600129 have associated skeletal muscle expression quantitative trait loci (eQTLs) in KLF5 (not pictured, located ≈500 kb from top association, rs7993814). The dotted line represents genome-wide significance cutoff (P<5×10−8). SNP indicates single-nucleotide polymorphism.
Top Associated Loci for ExWAS/GWAS of CK Maximum Value During the Treatment Period
Top Associated Exonic Loci for ExWAS of CK Maximum Value During the Treatment Period