| Literature DB >> 35536524 |
Yang Cao1, Yue Liu1, Limei Shang1, Huijuan Chen1, Yanhua Yue1, Weimin Dong1, Yanting Guo1, Haonan Yang1, Xiaojun Yang2, Yan Liu3, Weiying Gu4, Xiaoying Zhang5.
Abstract
BACKGROUND: The clinical significance of miR-17 in patients with acute myeloid leukemia (AML) remains unknown.Entities:
Keywords: Acute myeloid leukemia; Expression; Prognosis; Recurrence; miR-17
Mesh:
Substances:
Year: 2022 PMID: 35536524 PMCID: PMC9209371 DOI: 10.1007/s10147-022-02161-5
Source DB: PubMed Journal: Int J Clin Oncol ISSN: 1341-9625 Impact factor: 3.850
Fig. 1BM miR-17 expression in controls and AML patients. The distributions of miR‐17 expression in controls, whole-cohort AML and CN‐AML were presented with scatter plots. The median level of miR‐17 expression in each group was shown with horizontal line. AML acute myeloid leukemia; CN‐AML cytogenetically normal AML. **P < 0.01; ***P < 0.001; NSP > 0.05. Data are shown as mean from three independent experiments
Correlation of miR-17 expression with clinical/laboratory features in AML patients
| Patient's features | Total (n = 115) | High (n = 57) | Low (n = 58) | |
|---|---|---|---|---|
| Sex, male/female | 62/53 | 30/27 | 32/26 | 0.785 |
| Median age, years (range) | 57 (18–88) | 58 (19–88) | 55.5 (18–82) | 0.538 |
| ≥ 60/ < 60, years | 55/60 | 27/30 | 28/30 | 0.922 |
| Median WBC, × 109/L (range) | 11.4 (0.4–470.3) | 12.9 (0.4–295.5) | 10.9 (1.0–470.3) | 0.765 |
| ≥ 20/ < 20, 109/L | 48/67 | 26/31 | 22/36 | 0.404 |
| Mean Hb, g/L ± SD | 83.3 ± 23.8 | 79.1 ± 21.5 | 87.4 ± 25.4 | 0.061 |
| Median PLT, × 109/L (range) | 43 (5–946) | 45 (6–946) | 37.5 (5–832) | 0.437 |
| Median BM blasts, % (range) | 66 (21–97) | 66 (21–97) | 67.25 (22–94) | 0.900 |
| ≥ 50/ < 50, % | 85/30 | 44/13 | 41/17 | 0.427 |
| FAB subtypes, n (%) | ||||
| M0 | 1 (0.9) | 0 (0.0) | 1 (1.7) | 1.000 |
| M1 | 20 (17.4) | 6 (10.5) | 14 (24.1) | 0.054 |
| M2 | 58 (50.4) | 32 (56.1) | 26 (44.8) | 0.225 |
| M4 | 2 (1.7) | 1 (1.8) | 1 (1.7) | 1.000 |
| M5 | 26 (22.6) | 13 (22.8) | 13 (22.4) | 0.960 |
| No data | 8 (7.0) | 5 (8.8) | 3 (5.2) | 0.695 |
| ELN risk, n (%) | ||||
| Favorable | 34 (29.6) | 12 (21.1) | 22 (37.9) | |
| Intermediate | 57 (49.6) | 29 (50.9) | 28 (48.3) | 0.780 |
| Adverse | 24 (20.9) | 16 (28.1) | 8 (13.8) | 0.053 |
| Gene mutations, n (%) | ||||
| TP53 ( +) | 8 (7.0) | 6 (10.5) | 2 (3.4) | 0.261 |
| CEBPA double ( +) | 11 (9.6) | 2 (3.5) | 9 (15.5) | |
| NPM1 ( +) | 15 (13.0) | 9 (15.8) | 6 (10.3) | 0.386 |
| FLT3-ITD ( +) | 15 (13.0) | 6 (10.5) | 9 (15.5) | 0.427 |
| MLL-PTD ( +) | 2 (1.7) | 2 (3.5) | 0 (0.0) | 0.243 |
| TET2 ( +) | 16 (13.9) | 9 (15.8) | 7 (12.1) | 0.564 |
| IDH1 ( +) | 5 (4.3) | 3 (5.3) | 2 (3.4) | 0.984 |
| IDH2 ( +) | 17 (14.8) | 7 (12.3) | 10 (17.2) | 0.454 |
| DNMT3A ( +) | 19 (16.5) | 12 (21.1) | 7 (12.1) | 0.195 |
| ASXL1 ( +) | 5 (4.3) | 3 (5.3) | 2 (3.4) | 0.984 |
| c-kit ( +) | 9 (7.8) | 5 (8.8) | 4 (6.9) | 0.978 |
| RUNX1 ( +) | 9 (7.8) | 3 (5.3) | 6 (10.3) | 0.505 |
| NRAS ( +) | 13 (11.3) | 8 (14.0) | 5 (8.6) | 0.359 |
| KRAS ( +) | 6 (5.2) | 5 (8.8) | 1 (1.7) | 0.201 |
| Fusion gene, n (%) | ||||
| AML-ETO | 11 (9.6) | 5 (8.8) | 6 (10.3) | 0.774 |
| BCR-ABL | 1 (0.9) | 0 (0.0) | 1 (1.7) | 1.000 |
| CBFβ-MYH11 | 8 (7.0) | 4 (7.0) | 4 (6.9) | 1.000 |
| MLL-related | 2 (1.7) | 2 (3.5) | 0 (0.0) | 0.243 |
| CR ( ±) | 71/44 | 27/30 | 44/14 |
WBC white blood cells, Hb haemoglobin, PLT platelet, BM bone marrow, CR complete remission
Fig. 2Correlation between miR-17 expression and CR state. The distributions of AML patients according to the miR-17 expression and CR state. CR complete remission
Fig. 3The impact of BM miR-17 expression on survival in AML patients. a, b Kaplan–Meier survival analysis based on high or low level of miR-17 expression in whole-cohort AML and CN-AML patients. c Kaplan–Meier survival analysis of the AML patients from TCGA dataset as a validation cohort
Univariate and multivariate analyses of prognostic factors for OS in AML patients
| Variables | Univariate analysis | Multivariate analysis | ||
|---|---|---|---|---|
| HR (95% CI) | HR (95% CI) | |||
miR-17 expression (high vs. low) | 2.293 (1.414–3.716) | 2.232 (1.348–3.698) | ||
ELN risk (intermediate vs favorable) (adverse vs favorable) | 2.166 (1.185–3.958) 4.287 (2.132–8.622) | 1.457 (0.770–2.759) 1.608 (0.629–4.110) | 0.463 0.248 0.321 | |
Age (≥ 60 vs < 60) | 2.861 (1.749–4.681) | 2.346 (1.372–4.011) | ||
TP53 (mutant vs. wild-type) | 2.436 (1.106–5.368) | 1.305 (0.454–3.748) | 0.621 | |
IDH1 (mutant vs. wild-type) | 5.408 (2.111–13.855) | 3.427 (1.078–10.897) | ||
AML1-ETO (presence vs. absence) | 0.289 (0.091–0.920) | 0.516 (0.152–1.748) | 0.288 | |
WBC (≥ 20 vs. < 20 × 109/L) | 1.228 (0.764–1.972) | 0.397 | ||
BM blasts (%) (≥ 50 vs. < 50) | 1.121 (0.648–1.940) | 0.683 | ||
CEBPA (double mutant vs. other) | 0.468 (0.187–1.171) | 0.105 | ||
NPM1 (mutant vs. wild-type) | 0.948 (0.470–1.909) | 0.880 | ||
FLT3-ITD (mutant vs. wild-type) | 1.221 (0.624–2.387) | 0.560 | ||
TET2 (mutant vs. wild-type) | 0.967 (0.480–1.947) | 0.924 | ||
RUNX1 (mutant vs. wild-type) | 1.675 (0.764–3.672) | 0.198 | ||
ASXL1 (mutant vs. wild-type) | 0.914 (0.287–2.909) | 0.879 | ||
IDH2 (mutant vs. wild-type) | 0.828 (0.423–1.617) | 0.580 | ||
DNMT3A (mutant vs. wild-type) | 1.602 (0.887–2.894) | 0.118 | ||
HR hazard ratio, CI confidence interval, WBC white blood cells, BM, bone marrow. Multivariate analysis included variables with P < 0.05 in univariate analysis
Fig. 4miR-17 expression in the follow-up of AML patients in different stages. a miR-17 expression levels in 31 AML patients achieving a CR before and after treatment. b Dynamic alteration of miR-17 expression in the 8 paired AML patients with different clinical stages. Data are shown as mean ± SD from three independent experiments
Fig. 5DEGs between AML patients with high and low miR-17 expression. The rows indicate the genes and the columns represent the patients. The patients were sorted in order from left to right by increasing levels of miR-17. Pink and blue represent expression levels above and below median gene expression (white), respectively. DEGs: differentially expressed genes
Fig. 6Functional enrichment analysis of DEGs. a GO and b KEGG analysis for hub genes by DAVID. c Enriched terms were colored by cluster ID, connected by edges and rendered as a network plot using the Cytoscape tool. GO Gene Ontology, KEGG Kyoto Encyclopedia of Genes and Genomes
Fig. 7PPI network and MCODE components identified to be associated with the analysis of DEGs. a Overall PPI network of the DEGs. b Individual modules selected from the PPI network using the MCODE method. Each color represents each MCODE network. PPI protein–protein interaction; MCODE molecular complex detection