| Literature DB >> 35530047 |
Jiehui Jiang1,2, Jieming Zhang3, Zhuoyuan Li3, Lanlan Li3, Bingcang Huang1.
Abstract
Objectives: We proposed a novel deep learning radiomics (DLR) method to distinguish cognitively normal adults at risk of Alzheimer's disease (AD) from normal control based on T1-weighted structural MRI images.Entities:
Keywords: Alzheimer’s disease; artificial intelligence; deep learning radiomic; magnetic resonance imaging; support vector machine
Year: 2022 PMID: 35530047 PMCID: PMC9070098 DOI: 10.3389/fmed.2022.894726
Source DB: PubMed Journal: Front Med (Lausanne) ISSN: 2296-858X
FIGURE 1The framework of this study.
FIGURE 2The flow chart of the proposed DLR model.
FIGURE 3(A) The network structure of the ResNet34 model. “7 × 7” represents the size of the convolution kernel, “conv” represents convolution, “avg pool” represents average pooling, and “fc” represents fully connected layer. “64” means the number of channels, and “/2” means stride of 2. (B) Residual learning: a building block. x represents direct identity mapping, F(x) represents residual mapping, and F(x)+x is output.
Demographic information for subjects.
| Training/validation groups | Test groups | Longitudinal data | |||||||
| preAD | APOE+ | APOE− | NC | preAD | APOE+ | APOE− | Baseline | MCI | |
| N | 162 | 70 | 92 | 212 | 19 | 9 | 10 | 16 | 16 |
| Gender(M/F) | 68/94 | 36/34 | 32/60 | 103/109 | 5/14 | 3/6 | 2/8 | 9/7 | 9/7 |
| Age(years) | 76.3 ± 5.4 | 75.3 ± 6.3 | 76.9 ± 4.5 | 71.8 ± 5.7 | 75.3 ± 5.1 | 74.7 ± 6.9 | 75.9 ± 3.4 | 71.5 ± 5.8 | 80.8 ± 5.4 |
| EDU | 15.4 ± 3.0 | 14.9 ± 3.5 | 15.8 ± 2.5 | 16.7 ± 2.5 | 15.4 ± 2.1 | 16.0 ± 2.4 | 14.8 ± 1.7 | 16.13 ± 2.4 | 16.13 ± 2.4 |
| MMSE | 28.7 ± 1.6 | 28.5 ± 1.6 | 28.8 ± 1.6 | 29.1 ± 1.3 | 28.7 ± 1.3 | 28.8 ± 1.1 | 28.6 ± 1.6 | 29.2 ± 0.9 | 27.43 ± 2.0 |
| CDRSB | 0.3 ± 0.7 | 0.3 ± 0.8 | 0.3 ± 0.7 | 0.2 ± 0.4 | 0.3 ± 0.9 | 0.5 ± 1.2 | 0.1 ± 0.2 | 0.1 ± 0.2 | 1.63 ± 0.9 |
| APOE ε4 positive rate | 70/162 | N/A | N/A | 34/212 | 9/19 | N/A | N/A | 3/13 | 3/13 |
All data except APOEε4 positive rate were presented as mean ± standard deviation. EDU, education; MMSE, Mini-mental State Examination; CDRSB, clinical dementia rating sum of boxes.
Classification performance of different DL models in the pre-training step.
| Model | Accuracy (%) | Sensitivity (%) | Specificity (%) | AUC |
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| AlexNet | 96.28 ± 3.24 | 94.86 ± 5.88 | 97.38 ± 2.46 | 0.962 ± 0.04 |
| ZF-Net | 98.18 ± 1.88 | 97.55 ± 3.50 | 98.83 ± 1.98 | 0.980 ± 0.02 |
| ResNet18 | 95.68 ± 2.66 | 94.49 ± 4.93 | 96.58 ± 3.05 | 0.962 ± 0.03 |
| ResNet34 |
|
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| 0.964 ± 0.02 |
| InceptionV3 | 97.63 ± 2.43 | 95.91 ± 4.99 | 98.95 ± 1.35 | 0.976 ± 0.01 |
| Xception | 97.02 ± 3.84 | 97.62 ± 3.62 | 96.54 ± 5.15 | 0.973 ± 0.03 |
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| AlexNet | 87.91 ± 3.06 | 78.95 ± 4.30 | 95.00 ± 3.83 | 0.869 ± 0.03 |
| ZF-Net | 87.91 ± 2.40 | 79.47 ± 3.88 | 94.58 ± 2.01 | 0.870 ± 0.03 |
| ResNet18 | 87.67 ± 1.91 | 84.21 ± 3.50 | 90.41 ± 2.01 | 0.872 ± 0.02 |
| ResNet34 |
|
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| 0.893 ± 0.03 |
| InceptionV3 | 84.88 ± 2.26 | 84.21 ± 3.51 | 85.42 ± 4.05 | 0.848 ± 0.03 |
| Xception | 88.84 ± 2.14 | 88.40 ± 3.30 | 89.17 ± 4.48 | 0.886 ± 0.04 |
The bold values indicate classification results of the optimal model ResNet34 for Base DLR Model Selection.
The classification results of preAD vs. NC.
| Model | Accuracy (%) | Sensitivity (%) | Specificity (%) |
|
| |||
| Hippocampal model | 76.20 ± 6.05 | 44.72 ± 10.58 | 99.05 ± 2.27 |
| Traditional radiomics model | 77.01 ± 7.77 | 62.61 ± 10.31 | 87.73 ± 9.50 |
| Clinical model | 85.66 ± 5.24 | 83.31 ± 9.56 | 87.70 ± 7.65 |
| DLR model |
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| Hippocampal model | 72.44 ± 1.46 | 42.68 ± 2.93 | 96.09 ± 1.31 |
| Traditional radiomics model | 82.00 ± 4.09 | 68.59 ± 8.35 | 92.62 ± 4.58 |
| Clinical model | 79.65 ± 2.21 | 82.75 ± 4.24 | 77.20 ± 2.61 |
| DLR method |
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Bold values represent the classification performance of our proposed model.
FIGURE 4ROC curves of the four models between NC and preAD groups.
The classification results of NC vs. preAD APOE+.
| Model | Accuracy (%) | Sensitivity (%) | Specificity (%) |
|
| |||
| Hippocampal model | 76.90 ± 11.62 | 49.78 ± 26.80 | 99.37 ± 5.44 |
| Traditional radiomics model | 71.11 ± 10.60 | 54.42 ± 16.69 | 83.66 ± 9.33 |
| Clinical model | 71.11 ± 10.98 | 50.80 ± 15.66 | 84.94 ± 12.35 |
| DLR model |
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| Hippocampal model | 69.00 ± 6.84 | 30.71 ± 16.94 | 96.84 ± 15.91 |
| Traditional radiomics model | 78.87 ± 5.00 | 54.42 ± 16.21 | 83.66 ± 6.72 |
| Clinical model | 71.39 ± 4.65 | 32.84 ± 13.65 | 96.17 ± 4.37 |
| DLR model |
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Bold values represent the classification performance of our proposed model.
The classification results of NC vs. preAD APOE−.
| Model | Accuracy (%) | Sensitivity (%) | Specificity (%) |
|
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| Hippocampal model | 76.88 ± 12.86 | 75.46 ± 23.37 | 77.83 ± 12.60 |
| Traditional radiomics model | 73.50 ± 9.44 | 73.20 ± 12.45 | 72.51 ± 12.35 |
| Clinical model | 70.28 ± 9.69 | 60.20 ± 16.61 | 79.22 ± 12.05 |
| DLR model |
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| Hippocampal model | 63.36 ± 7.42 | 75.82 ± 24.86 | 50.90 ± 21.02 |
| Traditional radiomics model | 83.87 ± 3.04 | 78.00 ± 11.35 | 86.67 ± 6.66 |
| Clinical model | 70.10 ± 3.50 | 62.03 ± 7.93 | 73.95 ± 7.27 |
| DLR model |
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|
Bold values represent the classification performance of our proposed model.
FIGURE 5ROC curves of the four models between NC and preAD APOE+ groups (left) and between NC and preAD APOE– groups (right).
FIGURE 6The scores of the longitudinal data in preAD stage and MCI stage.