Literature DB >> 35526151

CAGE reveals expanded transcriptional dynamics and protein-coding capacity in the PTI response.

Ching Chan1,2.   

Abstract

Entities:  

Year:  2022        PMID: 35526151      PMCID: PMC9252477          DOI: 10.1093/plcell/koac127

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   12.085


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  8 in total

1.  Cap analysis gene expression for high-throughput analysis of transcriptional starting point and identification of promoter usage.

Authors:  Toshiyuki Shiraki; Shinji Kondo; Shintaro Katayama; Kazunori Waki; Takeya Kasukawa; Hideya Kawaji; Rimantas Kodzius; Akira Watahiki; Mari Nakamura; Takahiro Arakawa; Shiro Fukuda; Daisuke Sasaki; Anna Podhajska; Matthias Harbers; Jun Kawai; Piero Carninci; Yoshihide Hayashizaki
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-08       Impact factor: 11.205

Review 2.  From Chaos to Harmony: Responses and Signaling upon Microbial Pattern Recognition.

Authors:  Xiao Yu; Baomin Feng; Ping He; Libo Shan
Journal:  Annu Rev Phytopathol       Date:  2017-05-19       Impact factor: 13.078

3.  5' end-centered expression profiling using cap-analysis gene expression and next-generation sequencing.

Authors:  Hazuki Takahashi; Timo Lassmann; Mitsuyoshi Murata; Piero Carninci
Journal:  Nat Protoc       Date:  2012-02-23       Impact factor: 13.491

4.  Core Promoter Plasticity Between Maize Tissues and Genotypes Contrasts with Predominance of Sharp Transcription Initiation Sites.

Authors:  María Katherine Mejía-Guerra; Wei Li; Narmer F Galeano; Mabel Vidal; John Gray; Andrea I Doseff; Erich Grotewold
Journal:  Plant Cell       Date:  2015-12-01       Impact factor: 11.277

5.  Paired-end analysis of transcription start sites in Arabidopsis reveals plant-specific promoter signatures.

Authors:  Taj Morton; Jalean Petricka; David L Corcoran; Song Li; Cara M Winter; Alexa Carda; Philip N Benfey; Uwe Ohler; Molly Megraw
Journal:  Plant Cell       Date:  2014-07-17       Impact factor: 11.277

6.  PAMP-triggered genetic reprogramming involves widespread alternative transcription initiation and an immediate transcription factor wave.

Authors:  Axel Thieffry; Diego López-Márquez; Jette Bornholdt; Mojgan Gholami Malekroudi; Simon Bressendorff; Andrea Barghetti; Albin Sandelin; Peter Brodersen
Journal:  Plant Cell       Date:  2022-07-04       Impact factor: 12.085

7.  The transcriptional landscape of Arabidopsis thaliana pattern-triggered immunity.

Authors:  Marta Bjornson; Priya Pimprikar; Thorsten Nürnberger; Cyril Zipfel
Journal:  Nat Plants       Date:  2021-03-15       Impact factor: 15.793

8.  Global approaches for profiling transcription initiation.

Authors:  Robert A Policastro; Gabriel E Zentner
Journal:  Cell Rep Methods       Date:  2021-09-16
  8 in total

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