| Literature DB >> 35524861 |
Hanna-Leena Halme1, Toni Ihalainen1, Olli Suomalainen2, Antti Loimaala1,3, Sorjo Mätzke1, Valtteri Uusitalo1, Outi Sipilä1, Eero Hippeläinen4,5.
Abstract
BACKGROUND: Transthyretin amyloidosis (ATTR) is a progressive disease which can be diagnosed non-invasively using bone avid [99mTc]-labeled radiotracers. Thus, ATTR is also an occasional incidental finding on bone scintigraphy. In this study, we trained convolutional neural networks (CNN) to automatically detect and classify ATTR from scintigraphy images. The study population consisted of 1334 patients who underwent [99mTc]-labeled hydroxymethylene diphosphonate (HMDP) scintigraphy and were visually graded using Perugini grades (grades 0-3). A total of 47 patients had visual grade ≥ 2 which was considered positive for ATTR. Two custom-made CNN architectures were trained to discriminate between the four Perugini grades of cardiac uptake. The classification performance was compared to four state-of-the-art CNN models.Entities:
Keywords: Amyloidosis; Convolutional neural network; Deep learning; Scintigraphy; Transthyretin
Year: 2022 PMID: 35524861 PMCID: PMC9079204 DOI: 10.1186/s13550-022-00897-9
Source DB: PubMed Journal: EJNMMI Res ISSN: 2191-219X Impact factor: 3.434
Fig. 1Whole-body and cropped bone scintigraphy images of patients with different Perugini grades of cardiac uptake (0–3)
Fig. 2Preprocessing workflow for whole-body and thoracic planar images
Fig. 3Architectures for Linear a and Residual b models. In b, convolutional layers including skip connections are shown in green. The dimensionality of each layer is shown below the layers. N_classes refers to the number of classes, which was either 4 or 2 depending on the classification task
Cross-validated results for automated CNN four-class Perugini grade classification
| AUC | ACC | Grade 0 | Grade 1 | Grade 2 | Grade 3 | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| Precis | Recall | Precis | Recall | Precis | Recall | Precis | Recall | |||
| Linear | 0.86 | 0.66 | 0.86 | 0.68 | 0.37 | 0.59 | 0.29 | 0.61 | 0.91 | 0.83 |
| Residual | 0,86 | 0,67 | 0,88 | 0,68 | 0,40 | 0,65 | 0,22 | 0,65 | 0,83 | 0,83 |
| VGG16 | 0.87 | 0.74 | 0.83 | 0.83 | 0.44 | 0.45 | 0.46 | 0.57 | 1.00 | 0.79 |
| ResNet50 | 0.78 | 0.66 | 0.81 | 0.78 | 0.33 | 0.31 | 0.11 | 0.04 | 0.20 | 0.76 |
| InceptionV3 | 0.75 | 0.62 | 0.80 | 0.70 | 0.30 | 0.40 | 0.06 | 0.13 | 0.59 | 0.64 |
| MobileNet | 0.76 | 0.74 | 0.76 | 0.97 | 0.42 | 0.07 | 0.00 | 0.00 | 1.00 | 0.17 |
ACC = accuracy; AUC = area under the curve; Precis = precision
Cross-validated results for classification of Perugini grade 0–2 vs grade 3 cardiac uptake
| AUC | Accuracy | Grade 0–2 | Grade 3 | |||
|---|---|---|---|---|---|---|
| Precision | Recall | Precision | Recall | |||
| Linear | 0.94 | 0.99 | 1.00 | 0.99 | 0.73 | 0.89 |
| Residual | 0.94 | 0.99 | 1.00 | 1.00 | 0.83 | 0.89 |
| VGG16 | 0.92 | 0.99 | 1.00 | 0.99 | 0.62 | 0.85 |
| ResNet50 | 0.82 | 0.99 | 0.99 | 1.00 | 0.94 | 0.63 |
| InceptionV3 | 0.80 | 0.99 | 0.99 | 1.00 | 0.80 | 0.59 |
| MobileNet | 0.72 | 0.99 | 0.99 | 1.00 | 0.92 | 0.44 |
Cross-validated results for automated detection of patients with positive cardiac uptake suggestive for ATTR
| AUC | Accuracy | Negative | Positive | |||
|---|---|---|---|---|---|---|
| Precision | Recall | Precision | Recall | |||
| Linear | 0.88 | 0.97 | 0.99 | 0.98 | 0.59 | 0.79 |
| Residual | 0,89 | 0,97 | 0,99 | 0,98 | 0,58 | 0,81 |
| VGG16 | 0.77 | 0.98 | 0.98 | 1.00 | 0.81 | 0.54 |
| ResNet50 | 0.85 | 0.80 | 1.00 | 0.80 | 0.14 | 0.90 |
| InceptionV3 | 0.78 | 0.95 | 0.98 | 0.97 | 0.39 | 0.60 |
| MobileNet | 0.76 | 0.95 | 0.98 | 0.96 | 0.35 | 0.56 |
*Perugini grade ≥ 2
Fig. 4Maximum activation maps for layers 2, 10, 17 and 24 of the Linear model for input images representing different grades of cardiac uptake. Activation maps demonstrate that the convolutional neural network model finds abnormal myocardial signal in patients with cardiac uptake suggestive for ATTR and not extracardiac features, similarly to standard clinical reading by a physician
Fig. 5Maximum activation maps for layers 2, 12, 22 and 32 of the Residual model for input images representing different grades of cardiac uptake. Activation maps demonstrate that the convolutional neural network model finds abnormal myocardial signal in patients with cardiac uptake suggestive for ATTR similarly to physician and not extracardiac features similarly to standard clinical reading by physician